Assay Reader
This invention relates to methods and apparatus for detecting the presence of analyte in a sample, in particular to luminescence-based methods for such detection.
The use of luminescence in diagnostic assay systems has led to improvements in both sensitivity and the ability to quantify analyte levels, compared to traditional colour detection methods. A fluorescence-based system, for example, may employ a lamp to provide excitation light to excite a fluorescent label molecule and a detection system, typically a camera or photodiode, to quantify the emitted light from the fluorescent label. Very low levels of fluorescent label molecules may be detected in this way. Commonly in assay systems, fluorescent label molecules are attached to other molecules which take part in binding events involving analyte. This allows low levels of analyte to be detected and quantified.
A major drawback with the use of fluorescence-based assay systems is the high level of instrumentation required to detect and process the luminescent signal prior to its interpretation by the user. The provision of an excitation source, a photodetector and a processor results in bulky and/or expensive instruments.
Visually read qualitative assay systems incorporating coloured labels such as gold sol and blue latex particles provide useful but limited sensitivity. This is primarily
due to the inherent insensitivity of light absorption, which is how colour is detected. Whilst this has allowed the development of rapid user-friendly assay systems for the assessment of analytes such as hCG {human chorionic gonadotrophin} in the urine of pregnant women, there is a need for more sensitive assays in order to detect other analytes in similar user-friendly formats. Furthermore, improvements in the sensitivity of hCG assays may have significant implications in the detection of pregnancy in an emergency room setting, where the detection of pregnancy before any outwardly visible signs may directly affect the treatment administered.
The present inventors have discovered that the inherent sensitivity of luminescence may be exploited in a rapid user-friendly assay format to provide a result which can be visually assessed by the user and which has significantly greater sensitivity than conventional visually read colour-based assays.
Aspects of the invention relate to assay readers which allow the direct observation of a luminescent signal on an assay device by the user and are therefore suitable for use in rapid user-friendly assay systems.
One aspect of the invention provides an assay reader for determining the presence of a luminescent label in the capture zone of an assay device comprising, a positioning member to hold the assay device in a reading position, a light source which produces an excitation signal for exciting luminescent label in said capture zone when said assay member is in the reading position, and;
a viewing window for direct observation of the luminescent emission signal from said label in said capture zone.
A positioning member may be any feature which holds the device in place in or on the reader. Many such features are known in the art. For example, the member may be a clip, or a recess/protrusion which engages a corresponding protrusion/recess on the assay device.
A suitable light source may be any lamp or light emitter which produces light of a wavelength suitable to excite the label. Conveniently the source may be an LED. In some embodiments, the light source is an ultra-violet light source, for example an ultra-violet LED such as the Roithner Lasertechnik RLT370-110 UV emitter or the Toyoda-Gosei E1L5M-3P0AP-02 UV emitter.
In preferred embodiments, the luminescent label is a fluorescent label and the emission signal is a fluorescent emission signal.
A suitable viewing window may be any opening or open region which allows the operator to directly observe the emission signal from the capture zone of the assay device.
A capture zone is any region of an assay device in which the presence of luminescent label may be detected and/or measured to determine the presence of analyte in a sample. Thus in a lateral flow device, the capture zone may be part of a porous matrix which contains capture reagents for immobilising luminescent label. Such
reagents may be comprised within one or more binding regions. Depending on the assay format, the amount of immobilised luminescent label in the capture zone may increase or decrease in the presence of analyte. For example, in a sandwich assay format, the amount of immobilised label will increase, while in a competition assay format, the amount of immobilised label will decrease .
Alternatively, in a homogenous assay device, the capture zone may be any portion of an assay solution in which assay reagents bind to analyte to produce an increase or decrease in the amount of label molecule which is available to luminesce in response to excitation. In some embodiments, the capture zone of a homogenous assay device may thus comprise the entire assay solution.
The light source may be contained in a housing, the housing further containing the assay device when in the reading position, the viewing window being positioned in the housing so as to provide for direct observation of the emission signal from label in the capture zone of the device.
The window may, for example, comprise an aperture or port in the housing of the reader or in other embodiments, the housing may define a recess which accommodates the assay device in the reading position, the window comprising the mouth of the recess.
Preferably, the wavelength of the excitation signal is different from the wavelength of the emission signal, for example, the wavelength of the excitation signal may be
greater than the wavelength of the emission signal, or the wavelength of the excitation signal may be less than the wavelength of the emission signal.
For labels comprising beta-diketones of europium III (as used in DELFIA™ system from PerkinElmer Life Sciences) , an excitation signal of 350-370nm may be used to elicit an emission signal of 612nm.
For labels comprising fluoroscein (Molecular Probes) , an excitation signal of 490nm may be used to elicit an emission signal of 540nm.
For labels comprising up-converting phosphor (Niedbala et al Anal. Biochem. 293 22-30 (2001); UPlink system,
Orasure (Pennsylvania) ) , an excitation signal of about 980nm may be used to elicit an emission signal of 475 or 550nm.
Label in the capture zone may be confined to one or more discrete binding regions. These binding regions may, for example, take the form of a test line and a control line. The presence of label in the control line indicates that the test is working correctly and the presence of label in the test line indicates that there is analyte in the sample.
Two or more discrete binding regions may be observed through a single viewing window or through separate multiple viewing windows.
A reader may comprise a filter to block the passage of the excitation signal through the viewing window. This
prevents visual observation of the emission signal being obscured or swamped by the excitation signal.
Suitable filters include dichroic filters (available, for example, from Optical Coating Laboratory Inc, Santa Rosa, CA) or band pass filters (available, for example, from Edmund Optics, Barrington NJ) . In some embodiments, preferred filters may have UV protective properties.
The filter may be located at the viewing window or elsewhere in the reader. In some embodiments, it may be located in the assay device. In such embodiments, the assay device in the reading position may be located between the viewing window and the light source, such that the filter in the device blocks the passage of the excitation signal from the light source to the viewing window.
An assay reader as described herein may be used for determining the presence of a first and a second luminescent label in said capture zone. This may be useful, for example where the first label produces a control signal and the second label produces a signal indicative of the presence of analyte. Alternatively, the presence of two or more different analytes may be determined using the same assay device, a different label producing a signal indicative of each analyte. The reader may also be used to determine the presence of more than two, for example three, four, five, six or more than six labels in the capture zone.
This may be achieved in a number of ways. For example, a reader may comprise a first filter which blocks the
passage of the first emission signal, which may for example be a control signal, from the first label and a second filter which blocks passage of a second emission signal from a second luminescent label.
The first and second filters may be switchable between a first configuration, in which the first filter is positioned at said viewing window and a second configuration, in which the second filter is positioned at said viewing window. This allows the operator to change the filter to view the different emission signals in turn (i.e. sequentially).
Alternatively, the first filter may be positioned at a first viewing window and the second filter may be positioned at a second viewing window. This allows the operator to change the filter to view the different emission signals simultaneously using separate viewing windows .
In another approach, a reader may comprise a first light source which produces a first excitation signal for exciting the first luminescent label and a second light source which produces a second excitation signal for exciting the second luminescent label.
The first and second light sources may be switchable between a first mode, in which the first excitation signal is produced without the second excitation signal, and a second mode, in which the second excitation signal is produced without the first excitation signal. This allows the operator to observe the first emission signal by operating only the first light source and then to
observe the second emission signal by operating only the second light source.
To determine the presence of increased numbers of labels, the number of filters and/or light sources described above may be increased accordingly.
An assay reader may comprise a light guide which channels the excitation signal from the light source as required to different regions of the capture zone, for example to one or more binding regions such as test and control lines. For example light from a single light source may be split and be directed to two or more different regions in controlled proportions. This may increase the strength of the emission signal and improve the accuracy of the results.
The viewing window may comprise a lens to manipulate the emission signal for observation, i.e. the lens may be shaped so as to adapt the image in the viewing window, for example it may magnify the image in said window.
The properties of the lens depend on the composition, curvature and design of the lens. A lens may also be used in conjunction with apertures of particular shapes.
In embodiments in which the assay reader is used to determine the presence of a first and a second luminescent label in said capture zone, the emission from the first label may be adapted into a first shape and emission from the second label may be adapted into a second shape. This facilitates the distinction of the
two signals, one of which may be a control and the other a sample signal, by the operator.
The window may comprise a non-reflective surface to prevent reflected ambient light from impeding observation of the emission signal. The window may also comprise a screen which allows passage of the emission signal but prevents the entry of external ambient light into the reader .
The light source may be powered by a power source such as a battery connected thereto. Suitable batteries include lithium and alkaline batteries. The reader may comprise circuitry which is adapted to power the light source in the presence of liquid in said assay device. Suitable circuitry may include electrodes to contact the assay device in the reading position.
The reader may also comprise circuitry which provides a fixed current from said battery. This prevents inaccurate or false readings caused by low battery charge. An example of suitable circuitry is shown in Figure 5. In this example, two diodes (Dl, D2 ) are fed from resistor (Rl) and develop a constant voltage of 2V (approx.) regardless of battery voltage. This voltage is connected to the base of transistor (Tl) . The constant base emitter drop of 0.7V ensures that a fixed voltage of 1.3V (approx.) appears across resistor (R2). This sets the current flowing out of the emitter of the transistor (Tl) at a fixed level. The current flowing into the connector is approximately equal to the emitter current, and hence the current through the light emitting diode (D3) is fixed at this level.
To ensure that the reader is working properly before taking a reading, an assay reader may comprise a control indicator to indicate the generation of the excitation signal.
Suitable control indicators may include an LED, electrochromic or thermochromic indicator. Such an indicator may be positioned on an outer surface of said reader or within the housing such that the indicator is visible through a control window. Alternatively, fluorescent dye may be disposed within the housing to produce a control emission signal in response to the excitation signal.
The reader and the assay device may be separable components. The assay device for example may be disposable after a single use while the reader may be reusable using a fresh assay device for each reading.
Alternatively, the reader and the assay device may be non-separable and both elements may be disposable after a single use.
Preferably, the assay reader has dimensions suitable for hand-held operation and convenient storage.
An assay device suitable for use in combination with a reader as described herein may include any device which produces a luminescent, preferably fluorescent, signal which is modulated (i.e. increased or decreased) by the presence of analyte. Preferably, a signal is produced or increased in the presence of analyte, for example through
a sandwich assay format, although other arrangements are also possible, for example a competition assay format. The principles and practice of fluorescence based immunoassays is well known in the art and various examples are commercially available, including Ramp™
(Response Biomedical, Burnaby Canada) and Biosite Triage™ (Biosite, San Diego CA) .
Suitable assay devices for use with a reader of the invention include lateral flow immunoassay devices and homogenous assay devices.
In a lateral flow immunoassay in the 'sandwich' format, the presence of sufficient analyte in a sample will cause the formation of a 'sandwich' interaction at the capture zone in the lateral flow assay, whereby polystyrene microspheres loaded with a fluorescent dye of choice become immobilised. Therefore, when the assay device held in the reading position and the light source is switched on, visible fluorescence is emitted. When sufficient particles are bound, the emitted light will be visible to the naked eye.
In a homogeneous assay device, sample is added directly to reagents which include a luminescent label in a reaction chamber. The presence of analyte in the sample increases or reduces the amount of label in the chamber which is able to luminescence in response to excitation. Examples of homogenous assay systems include molecular beacons (Tyagi & Kramer (1996) Nat. Biotechnol. 14 303- 318) .
Another aspect of the invention provides an assay apparatus comprising an assay reader as described above and one or more assay devices.
As described above, suitable assay devices produce a luminescent, preferably fluorescent, signal which is modulated (i.e. increased or decreased) by the presence of analyte. Such devices are well known in the art.
Suitable assay devices may comprise a capture zone which contains capture reagents such as antibody molecules, antigens, nucleic acids, lectins, and enzymes suitable for capturing a label. A device may also incorporate one or more luminescent labels suitable for capture in the capture zone, the extent of capture being determined by the presence of analyte. Suitable labels include fluorescent labels immobilised in polystyrene microspheres . Microspheres may be coated with immunoglobulins to allow capture in the capture zone. Other suitable labels include quantum dots and up- converting phosphor containing ceramic particles.
Another aspect of the invention provides a method of determining the presence of a luminescent label in the capture zone of an assay device comprising, exciting said label with an excitation signal of a first wavelength such that the excited label produces an emission signal of a second wavelength, and; visually observing the emission signal.
A method may further comprise filtering said excitation signal from said emission signal prior to observing said emission signal.
Another aspect of the invention provides a method of determining the presence of an analyte in a sample comprising; providing an assay device which comprises a luminescent label and a capture zone, contacting said device with a sample suspected of containing an analyte; such that the amount of label captured in the capture zone is altered in the presence of said analyte in the sample relative to the absence of analyte in the sample, exciting label captured in said capture zone with an excitation signal of a first wavelength such that the excited label produces an emission signal of a second wavelength, and; visually observing the emission signal.
Aspects of the present invention will now be illustrated with reference to the accompanying figures described below and experimental exemplification, by way of example and not limitation. Further aspects and embodiments will be apparent to those of ordinary skill in the art.
All documents mentioned in this specification are hereby incorporated herein by reference.
Figure 1 shows a perspective view of an assay reader according to one embodiment of the invention with an assay device in the reading position.
Figure 2 shows a cutaway perspective view of an assay reader according to one embodiment of the invention with
an assay device in the reading position showing the housing interior.
Figure 3 shows a plan view of the interior of the housing.
Figure 4 shows an example of a circuit plan for an assay reader.
Figure 5 shows an example of current regulating circuitry.
Table 1 shows results obtained using a model hCG lateral flow sandwich assay using fluorescent microspheres and read using a prototype visual reader.
Table 2 shows results obtained using a model strep A lateral flow sandwich assay using fluorescent microspheres and read using a prototype visual reader.
Examples
Sandwich lateral flow assays were performed as described in EP029114 using polystyrene microspheres (obtained from Duke Scientific Corporation, Palo Alto) , inside which a fluorescent dye was immobilised. This dye is proprietary to Duke, but is based upon chelates of beta-diketones and the lanthanide metal ion europium III. Other lanthanide metal ions such as terbium III, samarium III and dysprosium III may also be employed. The betadiketones are selected to allow for maximal excitation at about
350nm. Emission is dictated by the europium ion, and is maximal at about 612nm.
Preparation of microspheres
1 ml of 0.15% solids (w/v) polystyrene microspheres coated with antibody was prepared according to the following protocol.
Stock antibody, either Unipath mouse monoclonal 3299:4 anti-alpha hCG (human chorionic gonadotrophin - the hormone whose presence indicates that a woman is pregnant) or rabbit polyclonal an ti -Streptococcus A (Biospacific) , was diluted to the required working concentration in lOmM disodium tetra borate buffer, pH 8.6, with 0.1% sodium azide (w/v) as preservative. For the anti-hCG antibody, this dilution was 100-120 μg/ml, and for the anti-Streptococcus A antibody, 50-70 μg/ml.
75μl of stock polystyrene microspheres {at 2% solids w/v) were placed in the bottom of a round-bottomed microfuge tube {2ml size). For the hCG assay, the microspheres were 190nm in size with europium III chelates incorporated at 10% (w/w) , and for the Streptococcus A assay, the microspheres were 400nm in size with europium III chelates incorporated at 10% (w/w) . The tube (containing the microspheres) was placed on a vortex mixer, low setting, and mixed gently.
While the microspheres were mixing, 925μl of antibody solution was slowly added, and the microspheres / antibody mixture was kept mixing for at least 10 seconds after all of the antibody was added.
The microspheres/antibody mixture was then probe- sonicated as follows: the cleaned tip of a probe sonicator (MSE Soniprep 150) was placed into the microfuge tube to a depth of two thirds of the liquid.
The probe sonicator was turned on and set to 6 micron amplitude for about 10 to 15 seconds, ensuring that the microspheres/antibody mixture was not frothing.
The tubes were then placed on an end-over mixer and placed in a subdued-lighting environment to incubate for 1 hour at room temperature. This ensures full passive coating of the microspheres with antibody. 15μl of 200mg/ml BSA solution was then added to the microspheres/antibody mixture, and mixing was continued for a further 30 minutes at room temperature using the end-over mixer, again in subdued lighting.
The tubes were then removed from the end-over mixer and centrifuged at 13,000 rpm (MSE Micro Centaur) for 10 minutes (400nm-microsphere size) or 20 minutes (190nm- microsphere size) . The supernatant was discarded and the microsphere pellet resuspended with 1 ml of lOmM disodium tetra borate (pH 8.6 with 0.1% sodium azide {w/v) as preservative) using pipetting action / sonication bath {Grant XB2 Ultrasonic Bath) and vortexing. The microsphere suspension was then probe-sonicated again as above .
The microfuge tubes were then centrifuged again as above. The supernatant was discarded and the microsphere pellet resuspended using pipetting action/sonication bath and vortexing with 1 ml storage buffer: 20% sucrose, 6.5% B SA in lOmM disodium tetraborate, (pH 8.6 with 0.1% sodium azide (w/v) as preservative) . The microsphere suspension was sonicated again as above and then stored at 4°C until required for use.
Assay reader
A prototype assay reader (1) was made as shown in Figures
1 to 3 and as follows:
A Roithner Lasertechnik RL T370-110 UV emitter (7), a 330-Ohm resistor (9), a switching mechanism (10), and three lithium-cell batteries (Panasonic CR1818 3V) (5) were assembled and connected with wiring (11) according to the circuit diagram shown in figure 4, and housed in a plastic casing (4) suitable for holding the plastic lateral flow assay carriers (3) employed in the experimental work. Screw holes (8) for assembly of the casing (4) are shown in Figures 1 to 3.
The plastic casing (4) had a viewing window (2), which was covered with ultra-violet protective (supplied by Upland, CA) as commonly used in ultra-violet radiation blocking spectacles. When the plastic lateral flow assay carrier (3) was inserted into the prototype assay reader (1), a switch (10) was activated and the circuit completed.
Due to the design of the reader, the UV emitter (7) was positioned such that any immobilised microspheres (6) in the lateral flow assay, when assembled into the carrier (3), were directly aligned with the UV emitter (7). Therefore the fluorescent dye in the immobilised microspheres was excited, and when sufficient microspheres were immobilised the visible fluorescence could be observed through the UV-protected window (2) .
hCG immunoassay
A model hCG lateral flow sandwich assay was set up. Liquid-conducting material, in this case nitrocellulose (Schliecher & Schuell, Unipath Code 500213) with a restricted zone of immobilised protein, in this case Unipath mouse monoclonal 3468:2 anti-beta hCG antibody, was prepared as detailed in EP0291194.
The nitrocellulose membrane was cut into strips 6mm wide and 45mm in length, the immobilised antibody being a 1 mm wide band at a distance of 10mm from the end of the strip. These strips were assembled onto rigs such that the immobilised band of antibody was 10mm from the bottom of each strip when held in a vertical position. Some absorbent material, such as Schliecher & Schuell gel blotting paper, was held in place at the top of each strip to absorb excess liquid. At the base of each strip was applied a mixture of 2.5μl of the anti-alpha hCG coated fluorescently-dyed polystyrene microspheres (at 0.15% solds w/v in storage buffer) and 25μl of hCG solution: hCG from Sigma, dissolved in phosphate buffered saline, pH 7.4, with 0.1% ovalbumin (Sigma) and 0.1% sodium azide as preservative) and calibrated using an AutoDELFIA assay for hCG.
When the microspheres/hCG solution was taken up by the nitrocellulose, a further 25μl of hCG solution was added to the base of each strip. When all of the liquid was taken up, the nitrocellulose was removed from the rig, assembled into plastic carriers and read using the prototype assay reader.
The results obtained from this experiment are shown in Table 1 below. As can be seen, levels of hCG as low as
1.81 mlU/ml can be detected visually using a lateral flow assay with fluorescent microspheres and the prototype reader.
This compares favourably with commercially available hCG lateral flow sandwich assays, such as the Clear Blue Easy™ (Unipath Ltd. ) pregnancy test kit, with a lower detection limit of 50 mlU/ml, and the First Response Early Result™ (Carter-Wallace Inc) pregnancy test kit, which has a similar detection limit of about 50 mlU/ml.
Streptococcus A Immunoassay
A standard immunoassay for Streptococcus A specific antigen would normally begin by performing an extraction procedure on a throat swab sample to release the Group A specific carbohydrate antigen from the peptidoglycan cell wall of the bacteria. This extraction procedure can be performed by placing the throat swabs into a 1:1 mixture of 1M acetic acid and 1M sodium ni tri te (320μl total volume) . Mixing these two chemicals produces nitrous acid (an instable acid) which cleaves the Streptococcus A specific antigen from the bacterial cell wall. After about 2 minutes, 160μl of a neutralising reagent, typically 1.6M Tris Base, can be added and a lateral flow assay performed on the neutralised cell extract.
A model assay system for the detection of Streptococcus A specific was performed by substituting 20μl volumes of standards of the purified Streptococcus A specific carbohydrate antigen for the throat swab, and carrying out the rest of the procedure (to mimic the real assay) . The standards (Unipath, in-house) were prepared to give
antigen levels equivalent to known numbers of cells in a suspension (cfu or colony forming units per ml) .
Liquid-conducting material, in this case nitrocellulose (Schliecher & Schuell, Unipath Code 500226) with a restricted zone of immobilised protein, in this case rabbit polyclonal G47010145 anti-Strep . A antibody (BiosPacific) , was prepared as detailed in EP0291194.
The nitrocellulose membrane was cut into strips 6mm wide and 45mm in length, the immobilised antibody being a 1mm wide band at a distance of 10mm from the end of the strip. These strips were assembled onto rigs such that the immobilised band of antibody was 10mm from the bottom of each strip when held in a vertical position. Some absorbent material, such as Schliecher & Schuell gel blotting paper, was held in place at the top of each strip to absorb excess liquid. At the base of each strip was applied a mixture of 2.5μl of anti-Strep. A antibody coated fluorescently-dyed polystyrene microspheres (at 0.075% solids w/v in storage buffer) and 25μl of the neutralised cell extract. When the microspheres/cell extract solution was taken up by the nitrocellulose, a further 25μl of cell extract solution was added to the base of each strip. When all of the liquid was taken up, the nitrocellulose was removed from the rig, assembled into plastic carriers and read using the prototype assay reader.
The results from this experiment are shown in Table 2.
As can be seen, the lowest detectable level of Streptococcus A specific antigen was that present in
standard antigen preparation 5. This is equivalent to the amount of antigen one would expect to detect from 20μl of a 7.5 x 105 cfu/ml cell suspension. As only 20μl of standard was used in the experiment, then the test has detected the equivalent of 1.5 x 104 cfu.
This compares favourably with commercially available lateral flow assays for Streptococcus A based on the detection of the carbohydrate antigen. QuickVue Flex™ lateral flow Strep . A test (Quidel, San Diego, CA) detects about 5 x 105 cfu or Streptococcus A organisms from a throat swab and Strep . A OIA MAX™ optical immunoassay ThermoBiostar, Boulder, CO) detects 1.2 x 104 cfu from a throat swab - although this is not a lateral flow system, this is most sensitive immunoassay commercially available for the detection of Streptococcus A.
The prototype assay reader system allows for a 30-fold improvement over other lateral flow devices in the detection of Streptococcus A through the presence of the carbohydrate antigen.
Table 1
Table 2