WO2002081490A3 - Computer-directed assembly of a polynucleotide encoding a target polypeptide - Google Patents
Computer-directed assembly of a polynucleotide encoding a target polypeptideInfo
- Publication number
- WO2002081490A3 WO2002081490A3 PCT/US2002/001649 US0201649W WO02081490A3 WO 2002081490 A3 WO2002081490 A3 WO 2002081490A3 US 0201649 W US0201649 W US 0201649W WO 02081490 A3 WO02081490 A3 WO 02081490A3
- Authority
- WO
- WIPO (PCT)
- Prior art keywords
- computer
- target polypeptide
- target
- polynucleotide encoding
- polynucleotide
- Prior art date
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K1/00—General methods for the preparation of peptides, i.e. processes for the organic chemical preparation of peptides or proteins of any length
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/66—General methods for inserting a gene into a vector to form a recombinant vector using cleavage and ligation; Use of non-functional linkers or adaptors, e.g. linkers containing the sequence for a restriction endonuclease
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
- G16B30/20—Sequence assembly
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01J—CHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
- B01J2219/00—Chemical, physical or physico-chemical processes in general; Their relevant apparatus
- B01J2219/00274—Sequential or parallel reactions; Apparatus and devices for combinatorial chemistry or for making arrays; Chemical library technology
- B01J2219/00583—Features relative to the processes being carried out
- B01J2219/00603—Making arrays on substantially continuous surfaces
- B01J2219/00659—Two-dimensional arrays
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01J—CHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
- B01J2219/00—Chemical, physical or physico-chemical processes in general; Their relevant apparatus
- B01J2219/00274—Sequential or parallel reactions; Apparatus and devices for combinatorial chemistry or for making arrays; Chemical library technology
- B01J2219/0068—Means for controlling the apparatus of the process
- B01J2219/00686—Automatic
- B01J2219/00689—Automatic using computers
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01J—CHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
- B01J2219/00—Chemical, physical or physico-chemical processes in general; Their relevant apparatus
- B01J2219/00274—Sequential or parallel reactions; Apparatus and devices for combinatorial chemistry or for making arrays; Chemical library technology
- B01J2219/0068—Means for controlling the apparatus of the process
- B01J2219/00695—Synthesis control routines, e.g. using computer programs
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01J—CHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
- B01J2219/00—Chemical, physical or physico-chemical processes in general; Their relevant apparatus
- B01J2219/00274—Sequential or parallel reactions; Apparatus and devices for combinatorial chemistry or for making arrays; Chemical library technology
- B01J2219/0068—Means for controlling the apparatus of the process
- B01J2219/007—Simulation or vitual synthesis
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01J—CHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
- B01J2219/00—Chemical, physical or physico-chemical processes in general; Their relevant apparatus
- B01J2219/00274—Sequential or parallel reactions; Apparatus and devices for combinatorial chemistry or for making arrays; Chemical library technology
- B01J2219/00718—Type of compounds synthesised
- B01J2219/0072—Organic compounds
- B01J2219/00722—Nucleotides
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07B—GENERAL METHODS OF ORGANIC CHEMISTRY; APPARATUS THEREFOR
- C07B2200/00—Indexing scheme relating to specific properties of organic compounds
- C07B2200/11—Compounds covalently bound to a solid support
-
- C—CHEMISTRY; METALLURGY
- C40—COMBINATORIAL TECHNOLOGY
- C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
- C40B40/00—Libraries per se, e.g. arrays, mixtures
- C40B40/04—Libraries containing only organic compounds
- C40B40/06—Libraries containing nucleotides or polynucleotides, or derivatives thereof
Abstract
Priority Applications (8)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CA002433463A CA2433463A1 (en) | 2001-01-19 | 2002-01-18 | Computer-directed assembly of a polynucleotide encoding a target polypeptide |
DE60227361T DE60227361D1 (en) | 2001-01-19 | 2002-01-18 | COMPUTER MEDIATED ASSEMBLY OF POLYNUCLEOTIDES ENCODING A TARGETED POLYPEPTIDE |
MXPA03006344A MXPA03006344A (en) | 2001-01-19 | 2002-01-18 | Computer-directed assembly of a polynucleotide encoding a target polypeptide. |
US10/250,894 US20040241650A1 (en) | 2001-01-19 | 2002-01-18 | Computer-directed assembly of a polynucleotide encoding a target polypeptide |
DK02739079T DK1385950T3 (en) | 2001-01-19 | 2002-01-18 | Computer controlled assembly of a polynucleotide encoding a target polypeptide |
JP2002579476A JP2004533228A (en) | 2001-01-19 | 2002-01-18 | Computer-based assembly of a polynucleotide encoding a target polypeptide |
EP02739079A EP1385950B1 (en) | 2001-01-19 | 2002-01-18 | Computer-directed assembly of a polynucleotide encoding a target polypeptide |
KR1020037009589A KR100860291B1 (en) | 2001-01-19 | 2002-01-18 | Computer-directed assembly of a polynucleotide encoding a target polypeptide |
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US26269301P | 2001-01-19 | 2001-01-19 | |
US60/262,693 | 2001-01-19 |
Publications (3)
Publication Number | Publication Date |
---|---|
WO2002081490A2 WO2002081490A2 (en) | 2002-10-17 |
WO2002081490A3 true WO2002081490A3 (en) | 2003-11-27 |
WO2002081490A8 WO2002081490A8 (en) | 2004-05-21 |
Family
ID=22998593
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
PCT/US2002/001649 WO2002081490A2 (en) | 2001-01-19 | 2002-01-18 | Computer-directed assembly of a polynucleotide encoding a target polypeptide |
Country Status (13)
Country | Link |
---|---|
US (9) | US20040241650A1 (en) |
EP (1) | EP1385950B1 (en) |
JP (1) | JP2004533228A (en) |
KR (1) | KR100860291B1 (en) |
AT (1) | ATE399857T1 (en) |
AU (1) | AU2008201007A1 (en) |
CA (1) | CA2433463A1 (en) |
DE (1) | DE60227361D1 (en) |
DK (1) | DK1385950T3 (en) |
ES (1) | ES2309175T3 (en) |
MX (1) | MXPA03006344A (en) |
PT (1) | PT1385950E (en) |
WO (1) | WO2002081490A2 (en) |
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2002
- 2002-01-18 DE DE60227361T patent/DE60227361D1/en not_active Expired - Lifetime
- 2002-01-18 PT PT02739079T patent/PT1385950E/en unknown
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- 2002-01-18 WO PCT/US2002/001649 patent/WO2002081490A2/en active Application Filing
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- 2002-01-18 US US10/250,894 patent/US20040241650A1/en not_active Abandoned
- 2002-01-18 US US10/052,582 patent/US20030138782A1/en not_active Abandoned
-
2004
- 2004-10-19 US US10/968,774 patent/US20050221340A1/en not_active Abandoned
- 2004-10-19 US US10/967,946 patent/US20050053997A1/en not_active Abandoned
- 2004-10-20 US US10/969,694 patent/US7966338B2/en active Active
- 2004-10-20 US US10/969,084 patent/US20050191648A1/en not_active Abandoned
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2005
- 2005-12-22 US US11/315,944 patent/US20060154283A1/en not_active Abandoned
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EP0316018A2 (en) * | 1985-03-29 | 1989-05-17 | Cetus Oncology Corporation | Modification of DNA sequences |
WO1990000626A1 (en) * | 1988-07-14 | 1990-01-25 | Baylor College Of Medicine | Solid phase assembly and reconstruction of biopolymers |
EP0385410A2 (en) * | 1989-02-28 | 1990-09-05 | Canon Kabushiki Kaisha | Partially double-stranded oligonucleotide and method for forming oligonucleotide |
WO1994012632A1 (en) * | 1992-11-27 | 1994-06-09 | University College London | Improvements in nucleic acid synthesis by pcr |
WO1999014318A1 (en) * | 1997-09-16 | 1999-03-25 | Board Of Regents, The University Of Texas System | Method for the complete chemical synthesis and assembly of genes and genomes |
WO2000042561A2 (en) * | 1999-01-19 | 2000-07-20 | Maxygen, Inc. | Oligonucleotide mediated nucleic acid recombination |
WO2000042560A2 (en) * | 1999-01-19 | 2000-07-20 | Maxygen, Inc. | Methods for making character strings, polynucleotides and polypeptides |
WO2000049142A1 (en) * | 1999-02-19 | 2000-08-24 | Febit Ferrarius Biotechnology Gmbh | Method for producing polymers |
Also Published As
Publication number | Publication date |
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US20030138782A1 (en) | 2003-07-24 |
US20050221340A1 (en) | 2005-10-06 |
MXPA03006344A (en) | 2004-12-03 |
KR20030077582A (en) | 2003-10-01 |
AU2008201007A1 (en) | 2008-05-15 |
DE60227361D1 (en) | 2008-08-14 |
US20050191648A1 (en) | 2005-09-01 |
ATE399857T1 (en) | 2008-07-15 |
CA2433463A1 (en) | 2002-10-17 |
US20050053997A1 (en) | 2005-03-10 |
WO2002081490A2 (en) | 2002-10-17 |
WO2002081490A8 (en) | 2004-05-21 |
PT1385950E (en) | 2008-08-12 |
EP1385950A2 (en) | 2004-02-04 |
DK1385950T3 (en) | 2008-11-03 |
US20050118628A1 (en) | 2005-06-02 |
US20050244841A1 (en) | 2005-11-03 |
JP2004533228A (en) | 2004-11-04 |
US20040241650A1 (en) | 2004-12-02 |
US20070054277A1 (en) | 2007-03-08 |
EP1385950B1 (en) | 2008-07-02 |
US20060154283A1 (en) | 2006-07-13 |
KR100860291B1 (en) | 2008-09-25 |
US7966338B2 (en) | 2011-06-21 |
ES2309175T3 (en) | 2008-12-16 |
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