WO2001018252A3 - Methods for disease detection - Google Patents

Methods for disease detection Download PDF

Info

Publication number
WO2001018252A3
WO2001018252A3 PCT/US2000/024639 US0024639W WO0118252A3 WO 2001018252 A3 WO2001018252 A3 WO 2001018252A3 US 0024639 W US0024639 W US 0024639W WO 0118252 A3 WO0118252 A3 WO 0118252A3
Authority
WO
WIPO (PCT)
Prior art keywords
methods
disease detection
sample
integrity
analysis
Prior art date
Application number
PCT/US2000/024639
Other languages
French (fr)
Other versions
WO2001018252A2 (en
Inventor
Anthony P Shuber
Original Assignee
Exact Lab Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Exact Lab Inc filed Critical Exact Lab Inc
Priority to EP00968342A priority Critical patent/EP1212468B1/en
Priority to CA002384368A priority patent/CA2384368A1/en
Priority to AT00968342T priority patent/ATE438737T1/en
Priority to AU78276/00A priority patent/AU7827600A/en
Priority to JP2001521786A priority patent/JP2003508083A/en
Priority to DE60042695T priority patent/DE60042695D1/en
Publication of WO2001018252A2 publication Critical patent/WO2001018252A2/en
Publication of WO2001018252A3 publication Critical patent/WO2001018252A3/en

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • C12Q1/6886Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6881Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for tissue or cell typing, e.g. human leukocyte antigen [HLA] probes

Abstract

The present invention provides methods for detecting disease, specially cancer, by analysis of a patient sample to determine the integrity of nucleic acids in the sample.
PCT/US2000/024639 1999-09-08 2000-09-08 Methods for disease detection WO2001018252A2 (en)

Priority Applications (6)

Application Number Priority Date Filing Date Title
EP00968342A EP1212468B1 (en) 1999-09-08 2000-09-08 Methods for disease detection
CA002384368A CA2384368A1 (en) 1999-09-08 2000-09-08 Method of detecting or screening cancer or precancer by determining the amount and integrity of nucleic acids
AT00968342T ATE438737T1 (en) 1999-09-08 2000-09-08 METHOD FOR DETECTING DISEASES
AU78276/00A AU7827600A (en) 1999-09-08 2000-09-08 Methods for disease detection
JP2001521786A JP2003508083A (en) 1999-09-08 2000-09-08 Methods for disease detection
DE60042695T DE60042695D1 (en) 1999-09-08 2000-09-08 METHOD FOR DETECTING DISEASES

Applications Claiming Priority (4)

Application Number Priority Date Filing Date Title
US15284799P 1999-09-08 1999-09-08
US60/152,847 1999-09-08
US09/455,950 US6586177B1 (en) 1999-09-08 1999-12-07 Methods for disease detection
US09/455,950 1999-12-07

Publications (2)

Publication Number Publication Date
WO2001018252A2 WO2001018252A2 (en) 2001-03-15
WO2001018252A3 true WO2001018252A3 (en) 2001-10-25

Family

ID=26849911

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2000/024639 WO2001018252A2 (en) 1999-09-08 2000-09-08 Methods for disease detection

Country Status (9)

Country Link
US (4) US6586177B1 (en)
EP (2) EP2110442A1 (en)
JP (2) JP2003508083A (en)
AT (1) ATE438737T1 (en)
AU (1) AU7827600A (en)
CA (1) CA2384368A1 (en)
DE (1) DE60042695D1 (en)
ES (1) ES2329543T3 (en)
WO (1) WO2001018252A2 (en)

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US9109256B2 (en) 2004-10-27 2015-08-18 Esoterix Genetic Laboratories, Llc Method for monitoring disease progression or recurrence

Families Citing this family (66)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6818404B2 (en) 1997-10-23 2004-11-16 Exact Sciences Corporation Methods for detecting hypermethylated nucleic acid in heterogeneous biological samples
JP4794052B2 (en) * 1999-04-09 2011-10-12 ジェンザイム・コーポレーション Method for detecting a nucleic acid that is an indicator of cancer
US6586177B1 (en) * 1999-09-08 2003-07-01 Exact Sciences Corporation Methods for disease detection
CA2394921A1 (en) 1999-12-07 2001-06-14 Anthony P. Shuber Supracolonic aerodigestive neoplasm detection
US6919174B1 (en) * 1999-12-07 2005-07-19 Exact Sciences Corporation Methods for disease detection
AU1804401A (en) * 1999-12-07 2001-06-18 Exact Sciences Corporation Apparatus and methods for drug screening based on nucleic acid analysis
US6911308B2 (en) 2001-01-05 2005-06-28 Exact Sciences Corporation Methods for detecting, grading or monitoring an H. pylori infection
US6428964B1 (en) * 2001-03-15 2002-08-06 Exact Sciences Corporation Method for alteration detection
US8986944B2 (en) 2001-10-11 2015-03-24 Aviva Biosciences Corporation Methods and compositions for separating rare cells from fluid samples
US8980568B2 (en) 2001-10-11 2015-03-17 Aviva Biosciences Corporation Methods and compositions for detecting non-hematopoietic cells from a blood sample
AU2003213107A1 (en) 2002-02-15 2003-09-09 Exact Sciences Corporation Methods for analysis of molecular events
US20030186248A1 (en) * 2002-03-29 2003-10-02 Erlander Mark G. Interpreting cytological specimens via molecular histological signatures
US7482116B2 (en) 2002-06-07 2009-01-27 Dna Genotek Inc. Compositions and methods for obtaining nucleic acids from sputum
US8275554B2 (en) * 2002-12-20 2012-09-25 Caliper Life Sciences, Inc. System for differentiating the lengths of nucleic acids of interest in a sample
US20050042639A1 (en) * 2002-12-20 2005-02-24 Caliper Life Sciences, Inc. Single molecule amplification and detection of DNA length
CA2510166A1 (en) 2002-12-20 2004-09-30 Caliper Life Sciences, Inc. Single molecule amplification and detection of dna
ITMI20030434A1 (en) 2003-03-07 2004-09-08 Istituto Oncologico Romagnolo Coope Rativa Sociale METHOD FOR THE DETECTION OF COLON-RECTUM TUMORS.
US20040259101A1 (en) * 2003-06-20 2004-12-23 Shuber Anthony P. Methods for disease screening
US20050014165A1 (en) * 2003-07-18 2005-01-20 California Pacific Medical Center Biomarker panel for colorectal cancer
DE10345021A1 (en) * 2003-09-23 2005-05-04 Univ Potsdam Method for the non-invasive early detection of colon cancer and / or colon cancer precursor cells
US20080241827A1 (en) * 2004-05-10 2008-10-02 Exact Sciences Corporation Methods For Detecting A Mutant Nucleic Acid
WO2005113769A1 (en) * 2004-05-14 2005-12-01 Exact Sciences Corporation Method for stabilizing biological samples for nucleic acid analysis
WO2006026654A2 (en) * 2004-08-27 2006-03-09 Exact Sciences Corporation Method for detecting a recombinant event
EP1800126B1 (en) * 2004-09-08 2014-12-17 The United States of America as represented by the Secretary of Health and Human Services, NIH Compositions and methods for the detection of hiv-1/hiv-2 infection
WO2006094149A2 (en) * 2005-03-01 2006-09-08 Exact Sciences Corporation Methods and compositions for detecting adenoma
ES2313143T3 (en) 2005-04-06 2009-03-01 Maurice Stroun METHOD FOR THE CANCER DIAGNOSIS THROUGH CIRCULATING DNA AND RNA DETECTION.
US9777314B2 (en) * 2005-04-21 2017-10-03 Esoterix Genetic Laboratories, Llc Analysis of heterogeneous nucleic acid samples
WO2006128192A2 (en) * 2005-05-27 2006-11-30 John Wayne Cancer Institute Use of free circulating dna for diagnosis, prognosis, and treatment of cancer
US8768629B2 (en) * 2009-02-11 2014-07-01 Caris Mpi, Inc. Molecular profiling of tumors
RU2008146868A (en) 2006-05-18 2010-06-27 Кэрис МПИ, Инк.445 Норт Фифс Стрит, 3-ий Флор, Феникс, Аризона 85004, США (US) SYSTEM AND METHOD FOR DETERMINING PERSONALIZED MEDICAL INTERVENTION IN A DISEASE
CA2657621A1 (en) * 2006-07-14 2008-01-17 Aviva Biosciences Corporation Methods and compositions for detecting rare cells from a biological sample
US10400283B2 (en) 2007-05-31 2019-09-03 Nancy M. Lee Method to predict or diagnose a gastrointestinal disorder or disease
US8883440B2 (en) 2007-07-26 2014-11-11 Nancy M. Lee Method to predict or diagnose a gastrointestinal disorder or disease
WO2009051842A2 (en) * 2007-10-18 2009-04-23 The Johns Hopkins University Detection of cancer by measuring genomic copy number and strand length in cell-free dna
EP2255198A4 (en) 2008-02-15 2011-05-25 Mayo Foundation Detecting neoplasm
WO2010053539A2 (en) * 2008-11-05 2010-05-14 The Texas A&M University System Methods for detecting colorectal diseases and disorders
WO2010056337A2 (en) * 2008-11-12 2010-05-20 Caris Mpi, Inc. Methods and systems of using exosomes for determining phenotypes
AR078584A1 (en) * 2009-10-09 2011-11-16 Baylor Res Inst IDENTIFICATION OF MICROARN (MIARN) IN FECAL SAMPLES AS A BIOMARCATOR OF GASTROENTEROLOGICAL CANCERS
JP2013511991A (en) * 2009-11-25 2013-04-11 クアンタライフ, インコーポレイテッド Methods and compositions for detecting genetic material
CN103237901B (en) 2010-03-01 2016-08-03 卡里斯生命科学瑞士控股有限责任公司 For treating the biomarker of diagnosis
JP2013526852A (en) 2010-04-06 2013-06-27 カリス ライフ サイエンシズ ルクセンブルク ホールディングス Circulating biomarkers for disease
US9309556B2 (en) 2010-09-24 2016-04-12 The Board Of Trustees Of The Leland Stanford Junior University Direct capture, amplification and sequencing of target DNA using immobilized primers
CA2826748C (en) 2011-02-09 2020-08-04 Bio-Rad Laboratories, Inc. Method of detecting variations in copy number of a target nucleic acid
US9260753B2 (en) 2011-03-24 2016-02-16 President And Fellows Of Harvard College Single cell nucleic acid detection and analysis
GB201107466D0 (en) 2011-05-05 2011-06-15 Loktionov Alexandre Device and method for non-invasive collection of colorectal mucocellular layer and disease detection
US9442046B2 (en) 2011-06-19 2016-09-13 Abogen, Inc. Device for sample collection
US8751261B2 (en) 2011-11-15 2014-06-10 Robert Bosch Gmbh Method and system for selection of patients to receive a medical device
US10876152B2 (en) 2012-09-04 2020-12-29 Guardant Health, Inc. Systems and methods to detect rare mutations and copy number variation
US20160040229A1 (en) 2013-08-16 2016-02-11 Guardant Health, Inc. Systems and methods to detect rare mutations and copy number variation
US11913065B2 (en) 2012-09-04 2024-02-27 Guardent Health, Inc. Systems and methods to detect rare mutations and copy number variation
CA3190199A1 (en) 2012-09-04 2014-03-13 Guardant Health, Inc. Systems and methods to detect rare mutations and copy number variation
WO2015013681A1 (en) 2013-07-25 2015-01-29 Bio-Rad Laboratories, Inc. Genetic assays
US10253358B2 (en) 2013-11-04 2019-04-09 Exact Sciences Development Company, Llc Multiple-control calibrators for DNA quantitation
EP3084004A4 (en) 2013-12-19 2017-08-16 Exact Sciences Corporation Synthetic nucleic acid control molecules
ES2784450T3 (en) 2013-12-28 2020-09-25 Guardant Health Inc Methods and systems to detect genetic variants
JP6670765B2 (en) 2014-03-07 2020-03-25 ディーエヌエー ジェノテック インク Compositions and methods for stabilizing nucleic acids in biological samples
PL3250710T3 (en) * 2015-01-30 2019-02-28 Enterome Host dna as a biomarker of crohn's disease
ES2796501T3 (en) * 2015-10-10 2020-11-27 Guardant Health Inc Methods and applications of gene fusion detection in cell-free DNA analysis
WO2017106768A1 (en) 2015-12-17 2017-06-22 Guardant Health, Inc. Methods to determine tumor gene copy number by analysis of cell-free dna
CN109642227B (en) 2016-07-19 2023-02-28 精密科学发展有限责任公司 Nucleic acid control molecules from non-human organisms
CN109642228B (en) 2016-07-19 2022-09-13 精密科学发展有限责任公司 Methylation control DNA
US9850523B1 (en) 2016-09-30 2017-12-26 Guardant Health, Inc. Methods for multi-resolution analysis of cell-free nucleic acids
CN109642250A (en) 2016-09-30 2019-04-16 夸登特健康公司 The method of multiresolution analysis for cell-free nucleic acid
US11746381B2 (en) 2017-03-10 2023-09-05 Cancer Diagnostics Research Innvovations, LLC Methods for diagnosing and treating gastric cancer using miRNA expression
CN113661249A (en) 2019-01-31 2021-11-16 夸登特健康公司 Compositions and methods for isolating cell-free DNA
WO2023200404A2 (en) * 2022-04-13 2023-10-19 Lucence Life Sciences Pte. Ltd. Method for determining cfdna fragment size ratio and fragment size distribution

Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US3413464A (en) * 1965-04-29 1968-11-26 Ibm Method for measuring the nucleic acid in biological cells after enhancement in an acidic solution
WO1996023895A1 (en) * 1995-02-01 1996-08-08 Board Of Regents, The University Of Texas System Detecting dna damage, measuring dna repair rates, and monitoring dna repair enzyme activity
WO1999007895A1 (en) * 1997-08-06 1999-02-18 Ludwig Institute For Cancer Research Methods for quantifying nucleic acid molecules

Family Cites Families (159)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US59718A (en) 1866-11-13 Improvement in knob-holes for carriage-curtains
US4101279A (en) 1977-04-06 1978-07-18 Muhammed Javed Aslam Device for the collection and processing of stool specimens
US4333734A (en) * 1980-01-18 1982-06-08 Sloan-Kettering Institute For Cancer Research Diagnostic device for fecal occult blood and method of use
US4535058A (en) 1982-10-01 1985-08-13 Massachusetts Institute Of Technology Characterization of oncogenes and assays based thereon
US4309782A (en) 1980-09-11 1982-01-12 Esteban Paulin Device for collecting fecal specimens
US4358535A (en) 1980-12-08 1982-11-09 Board Of Regents Of The University Of Washington Specific DNA probes in diagnostic microbiology
US5482834A (en) 1982-05-17 1996-01-09 Hahnemann University Evaluation of nucleic acids in a biological sample hybridization in a solution of chaotrophic salt solubilized cells
US4445235A (en) 1982-09-13 1984-05-01 Pearl Slover Stool specimen collector
DE3481357D1 (en) * 1983-01-08 1990-03-15 Fuji Photo Film Co Ltd METHOD FOR PRODUCING A SCREEN FOR STORING A RADIATION IMAGE.
US4578358A (en) 1983-05-03 1986-03-25 Warner-Lambert Company Collection of specimens and detection of occult blood therein
US4683195A (en) * 1986-01-30 1987-07-28 Cetus Corporation Process for amplifying, detecting, and/or-cloning nucleic acid sequences
US4683202A (en) 1985-03-28 1987-07-28 Cetus Corporation Process for amplifying nucleic acid sequences
US4871838A (en) 1985-07-23 1989-10-03 The Board Of Rijks Universiteit Leiden Probes and methods for detecting activated ras oncogenes
US4705050A (en) 1985-10-02 1987-11-10 Markham Charles W Moisture-activated floatation device
US5348855A (en) 1986-03-05 1994-09-20 Miles Inc. Assay for nucleic acid sequences in an unpurified sample
CA1284931C (en) 1986-03-13 1991-06-18 Henry A. Erlich Process for detecting specific nucleotide variations and genetic polymorphisms present in nucleic acids
US4981783A (en) * 1986-04-16 1991-01-01 Montefiore Medical Center Method for detecting pathological conditions
CA1341576C (en) 1986-08-11 2008-07-08 Thaddeus P. Dryja Diagnosis of retinoblastoma
US4735905A (en) 1986-08-15 1988-04-05 V-Tech, Inc. Specimen-gathering apparatus and method
US4935342A (en) 1986-12-01 1990-06-19 Syngene, Inc. Method of isolating and purifying nucleic acids from biological samples
AU625169B2 (en) 1987-03-23 1992-07-02 Imperial Chemical Industries Plc Molecular markers
US4857300A (en) * 1987-07-27 1989-08-15 Cytocorp, Inc. Cytological and histological fixative formulation and methods for using same
AU631788B2 (en) 1988-04-15 1992-12-10 Montefiore Medical Center Method for determining state of malignant and pre-malignant progression
FR2630000A1 (en) * 1988-04-18 1989-10-20 Sultan Bernard BOTTLE FOR COLLECTING AN URINARY BIOLOGICAL SAMPLE FOR CYTOBACTERIOLOGICAL EXAMINATION
US5272057A (en) 1988-10-14 1993-12-21 Georgetown University Method of detecting a predisposition to cancer by the use of restriction fragment length polymorphism of the gene for human poly (ADP-ribose) polymerase
US5248671A (en) 1989-02-15 1993-09-28 Board Of Regents, The University Of Texas System Methods and compositions for treatment of cancer using oligonucleotides
US5087617A (en) * 1989-02-15 1992-02-11 Board Of Regents, The University Of Texas System Methods and compositions for treatment of cancer using oligonucleotides
US5380645A (en) * 1989-03-16 1995-01-10 The Johns Hopkins University Generalized method for assessment of colorectal carcinoma
DE69032864T3 (en) 1989-03-29 2013-01-31 The Johns Hopkins University Evidence of failure of the wild-type p53 gene
US5527676A (en) * 1989-03-29 1996-06-18 The Johns Hopkins University Detection of loss of the wild-type P53 gene and kits therefor
US5362623A (en) 1991-06-14 1994-11-08 The John Hopkins University Sequence specific DNA binding by p53
US5196167A (en) * 1989-04-04 1993-03-23 Helena Laboratories Corporation Fecal occult blood test product with positive and negative controls
US5192501A (en) 1989-04-04 1993-03-09 Helena Laboratories Corporation Method of formulating a test ink for a fecal occult blood test product
US5589335A (en) 1989-04-05 1996-12-31 Amoco Corporation Hybridization promotion reagents
ATE94910T1 (en) 1989-06-23 1993-10-15 Canon Kk METHODS FOR THE DETECTION OF NUCLEIC ACIDS.
US5302509A (en) * 1989-08-14 1994-04-12 Beckman Instruments, Inc. Method for sequencing polynucleotides
US5213961A (en) * 1989-08-31 1993-05-25 Brigham And Women's Hospital Accurate quantitation of RNA and DNA by competetitive polymerase chain reaction
CA2029219A1 (en) 1989-11-08 1991-05-09 Mary K. Estes Methods and reagents to detect and characterize norwalk and related viruses
US5641628A (en) * 1989-11-13 1997-06-24 Children's Medical Center Corporation Non-invasive method for isolation and detection of fetal DNA
US5137806A (en) * 1989-12-11 1992-08-11 Board Of Regents, The University Of Texas System Methods and compositions for the detection of sequences in selected DNA molecules
CA2073186C (en) * 1990-01-04 2002-06-11 Bert Vogelstein Gene deleted in colorectal cancer in humans
US5126239A (en) * 1990-03-14 1992-06-30 E. I. Du Pont De Nemours And Company Process for detecting polymorphisms on the basis of nucleotide differences
US5200314A (en) 1990-03-23 1993-04-06 Chiron Corporation Polynucleotide capture assay employing in vitro amplification
WO1994000603A1 (en) 1992-06-26 1994-01-06 The Trustees Of Princeton University Method for detecting pre-cancerous or cancerous cells using p90 antibodies or probes
WO1992000311A1 (en) * 1990-06-27 1992-01-09 Princeton University Probes for detecting mutant p53
WO1992008133A1 (en) * 1990-10-29 1992-05-14 Dekalb Plant Genetics Isolation of biological materials using magnetic particles
US5846710A (en) 1990-11-02 1998-12-08 St. Louis University Method for the detection of genetic diseases and gene sequence variations by single nucleotide primer extension
US5352775A (en) 1991-01-16 1994-10-04 The Johns Hopkins Univ. APC gene and nucleic acid probes derived therefrom
DE69210588T2 (en) * 1991-02-05 1996-09-19 Lifecodes Corp Molecular genetic identification using probes that recognize polymorphic sites
CA2101943A1 (en) * 1991-02-05 1992-08-06 Kamal Bahar Simple test for detecting carcinoembryonic antigen
US5330892A (en) * 1991-03-13 1994-07-19 The Johns Hopkins University MCC gene (mutated in colorectal cancer) used for diagnosis of cancer in humans
US5378602A (en) * 1991-05-29 1995-01-03 The Government Of The United States Of America As Represented By The Secretary Of The Department Of Health And Human Services Highly informative microsatellite repeat polymorphic DNA markers twenty-[seven]six
US5468610A (en) 1991-05-29 1995-11-21 The Government Of The United States Of America As Represented By The Secretary Of The Department Of Health And Human Services Three highly informative microsatellite repeat polymorphic DNA markers
US5149506A (en) 1991-08-09 1992-09-22 Sage Products, Inc. Stool collection and transport device
US5506105A (en) 1991-12-10 1996-04-09 Dade International Inc. In situ assay of amplified intracellular mRNA targets
JP3633932B2 (en) 1992-04-01 2005-03-30 ザ ジョーンズ ホプキンズ ユニバーシティー スクール オブ メディシン Method for detecting mammalian nucleic acid isolated from stool sample and reagent for detection thereof
US5489508A (en) * 1992-05-13 1996-02-06 University Of Texas System Board Of Regents Therapy and diagnosis of conditions related to telomere length and/or telomerase activity
US5710028A (en) * 1992-07-02 1998-01-20 Eyal; Nurit Method of quick screening and identification of specific DNA sequences by single nucleotide primer extension and kits therefor
ATE231881T1 (en) 1992-07-02 2003-02-15 Savyon Diagnostics Ltd METHOD FOR SIMPLE NUCLEOTIDE PRIMER EXTENSION FOR DETECTING SPECIFIC ALLELES AND KIT SUITABLE THEREFOR
US5804383A (en) 1992-08-21 1998-09-08 The Regents Of The University Of California Method and assay for detection of the expression of allele-specific mutations by allele-specific in situ reverse transcriptase polymerase chain reaction
US5409586A (en) * 1992-08-26 1995-04-25 Hitachi, Ltd. Method for analyzing nucleic acid or protein and apparatus therefor
US5547838A (en) * 1992-10-01 1996-08-20 Life Technologies, Inc. Method for the rapid and ultra-sensitive detection of leukemic cells
US5331973A (en) 1993-03-15 1994-07-26 Fiedler Paul N Method for obtaining stool samples for gastrointestinal cancer testing
CA2092115C (en) * 1993-03-22 1998-12-15 Janet L. Taylor Testing for infestation of rapeseed and other cruciferae by the fungus leptosphaeria maculans (blackleg infestation)
US5518901A (en) * 1993-04-19 1996-05-21 Murtagh; James J. Methods for adapting nucleic acid for detection, sequencing, and cloning using exonuclease
US5492808A (en) * 1993-05-05 1996-02-20 The Johns Hopkins University Means for detecting familial colon cancer (FCC)
SE501439C2 (en) 1993-06-22 1995-02-13 Pharmacia Lkb Biotech Method and apparatus for analyzing polynucleotide sequences
US5466576A (en) 1993-07-02 1995-11-14 Fred Hutchinson Cancer Research Center Modulation of PIF-1-type helicases
EP0648845B1 (en) 1993-07-08 2002-10-09 Johnson & Johnson Clinical Diagnostics, Inc. Method for coamplification of two different nucleic acid sequences using polymerase chain reaction
CA2143428A1 (en) 1993-07-09 1995-01-19 Takanori Oka Method of nucleic acid-differentiation and assay kit for nucleic acid-differentiation
DE69428855T2 (en) 1993-09-13 2002-05-02 Canon Kk Determination of nucleic acids by PCR, measurement of the number of microbial cells, genes or gene copies by PCR and kit for their use
GB9322795D0 (en) 1993-11-05 1993-12-22 Wellcome Found Novel compounds
US5925517A (en) * 1993-11-12 1999-07-20 The Public Health Research Institute Of The City Of New York, Inc. Detectably labeled dual conformation oligonucleotide probes, assays and kits
US5416025A (en) 1993-11-29 1995-05-16 Krepinsky; Jiri J. Screening test for early detection of colorectal cancer
US5681697A (en) 1993-12-08 1997-10-28 Chiron Corporation Solution phase nucleic acid sandwich assays having reduced background noise and kits therefor
US5709998A (en) * 1993-12-15 1998-01-20 The Johns Hopkins University Molecular diagnosis of familial adenomatous polyposis
US5538851A (en) 1993-12-22 1996-07-23 Institut Pasteur And Cneva Primers for the amplification of genes coding for the enterotoxin and the lecithinase of Clostridium perfringens and their application to the determination of the presence and numeration of these bacteriae
US5496470A (en) * 1994-05-27 1996-03-05 Barnes International, Inc. Magnetic separator
US6037465A (en) * 1994-06-14 2000-03-14 Invitek Gmbh Universal process for isolating and purifying nucleic acids from extremely small amounts of highly contaminated various starting materials
US5512441A (en) * 1994-11-15 1996-04-30 American Health Foundation Quantative method for early detection of mutant alleles and diagnostic kits for carrying out the method
US5463782A (en) 1994-11-21 1995-11-07 Eric V. Carlson Foldable stool sample collection device
US5599662A (en) 1995-02-17 1997-02-04 Hoffmann-La Roche Inc. Oliconucleotide primers and probes for the detection of HIV-1
DE69632870T2 (en) 1995-03-17 2005-07-14 John Wayne Cancer Institute, Santa Monica DETECTION OF MELANOMA MEASURING TASTES USING MULTILARMARKER TEST
AU5296496A (en) 1995-03-24 1996-10-16 Mitokor Mutation detection by differential primer extension of mutant and wildtype target sequences
DE19530132C2 (en) * 1995-08-16 1998-07-16 Max Planck Gesellschaft Process for the purification, stabilization or isolation of nucleic acids from biological materials
US5800347A (en) 1995-11-03 1998-09-01 The General Hospital Corporation ROC method for early detection of disease
US6083698A (en) * 1995-09-25 2000-07-04 Oncormed, Inc. Cancer susceptibility mutations of BRCA1
NO954667D0 (en) 1995-11-17 1995-11-17 Dagfinn Oegreid Method for detecting Ki-ras mutations
US5670325A (en) 1996-08-14 1997-09-23 Exact Laboratories, Inc. Method for the detection of clonal populations of transformed cells in a genomically heterogeneous cellular sample
EP0815263B1 (en) 1995-12-22 2004-04-21 EXACT Sciences Corporation Methods for the detection of clonal populations of transformed cells in a genomically heterogeneous cellular sample
US5612473A (en) 1996-01-16 1997-03-18 Gull Laboratories Methods, kits and solutions for preparing sample material for nucleic acid amplification
EP0889972B1 (en) * 1996-01-17 2007-06-13 Sequenom-Gemini Limited Use of the determination of polymorphims in the promoter region of the TGF-beta 1 gene in diagnosis
AU720489B2 (en) 1996-01-30 2000-06-01 Exact Sciences Corporation Methods for detecting colon cancer from stool samples
US5741650A (en) 1996-01-30 1998-04-21 Exact Laboratories, Inc. Methods for detecting colon cancer from stool samples
EP0929694A4 (en) * 1996-03-15 2002-05-02 Penn State Res Found Detection of extracellular tumor-associated nucleic acid in blood plasma or serum using nucleic acid amplification assays
US5897999A (en) 1996-03-22 1999-04-27 The Johns Hopkins University Cancer drug screen based on cell cycle uncoupling
US5645995A (en) 1996-04-12 1997-07-08 Baylor College Of Medicine Methods for diagnosing an increased risk for breast or ovarian cancer
US5736333A (en) * 1996-06-04 1998-04-07 The Perkin-Elmer Corporation Passive internal references for the detection of nucleic acid amplification products
WO1998000013A1 (en) 1996-06-28 1998-01-08 The Regents Of The University Of California Enhancement of cancer cell death
US6146828A (en) 1996-08-14 2000-11-14 Exact Laboratories, Inc. Methods for detecting differences in RNA expression levels and uses therefor
US6203993B1 (en) 1996-08-14 2001-03-20 Exact Science Corp. Methods for the detection of nucleic acids
US6100029A (en) 1996-08-14 2000-08-08 Exact Laboratories, Inc. Methods for the detection of chromosomal aberrations
US5928870A (en) * 1997-06-16 1999-07-27 Exact Laboratories, Inc. Methods for the detection of loss of heterozygosity
US6143529A (en) 1996-08-14 2000-11-07 Exact Laboratories, Inc. Methods for improving sensitivity and specificity of screening assays
US6300077B1 (en) 1996-08-14 2001-10-09 Exact Sciences Corporation Methods for the detection of nucleic acids
US5952178A (en) 1996-08-14 1999-09-14 Exact Laboratories Methods for disease diagnosis from stool samples
US6020137A (en) 1996-08-14 2000-02-01 Exact Laboratories, Inc. Methods for the detection of loss of heterozygosity
ATE378422T1 (en) 1996-08-26 2007-11-15 Invitek Biotechnik & Biodesign METHOD FOR DETECTING CLINICALLY RELEVANT CHANGES IN THE DNA SEQUENCE OF THE KI-RAS ONCOGENE, ITS USE AND TEST KIT FOR EARLY DETECTION OF TUMORS
CA2410120A1 (en) 1996-08-28 1998-03-05 The Johns Hopkins University School Of Medicine Method for detecting cell proliferative disorders
US5856104A (en) 1996-10-28 1999-01-05 Affymetrix, Inc. Polymorphisms in the glucose-6 phosphate dehydrogenase locus
US6235474B1 (en) * 1996-12-30 2001-05-22 The Johns Hopkins University Methods and kits for diagnosing and determination of the predisposition for diseases
US5830665A (en) 1997-03-03 1998-11-03 Exact Laboratories, Inc. Contiguous genomic sequence scanning
GB9704444D0 (en) * 1997-03-04 1997-04-23 Isis Innovation Non-invasive prenatal diagnosis
DE19712332A1 (en) 1997-03-25 1998-10-01 Boehringer Mannheim Gmbh Method for the detection of microsatellite instability for tumor diagnosis
US6143496A (en) 1997-04-17 2000-11-07 Cytonix Corporation Method of sampling, amplifying and quantifying segment of nucleic acid, polymerase chain reaction assembly having nanoliter-sized sample chambers, and method of filling assembly
US6268136B1 (en) 1997-06-16 2001-07-31 Exact Science Corporation Methods for stool sample preparation
US5888778A (en) 1997-06-16 1999-03-30 Exact Laboratories, Inc. High-throughput screening method for identification of genetic mutations or disease-causing microorganisms using segmented primers
US6406857B1 (en) 1997-06-16 2002-06-18 Exact Sciences Corporation Methods for stool sample preparation
US6566101B1 (en) 1997-06-16 2003-05-20 Anthony P. Shuber Primer extension methods for detecting nucleic acids
US20020004201A1 (en) * 1997-06-16 2002-01-10 Lapidus Stanley N. Methods for the detection of loss of heterozygosity
GB9715034D0 (en) 1997-07-18 1997-09-24 Zeneca Ltd Assay
US6013442A (en) 1997-08-05 2000-01-11 Wisconsin Alumni Res Found Direct quantitation of low copy number RNA
US5942396A (en) 1997-08-19 1999-08-24 The Rockefeller University Method for identifying individuals at risk for colorectal neoplasia by quantifying normal colonic mucosal epithelial cell apoptosis
DE19736691A1 (en) 1997-08-22 1999-02-25 Michael Prof Dr Med Giesing Characterising and identifying disseminated metastatic cancer cells
WO1999016905A1 (en) * 1997-09-29 1999-04-08 City Of Hope Atm exon 24 variant as a cancer marker
US6818404B2 (en) * 1997-10-23 2004-11-16 Exact Sciences Corporation Methods for detecting hypermethylated nucleic acid in heterogeneous biological samples
WO1999020798A1 (en) 1997-10-23 1999-04-29 Exact Laboratories, Inc. Methods for detecting contamination in molecular diagnostics using pcr
CA2311501A1 (en) 1997-11-25 1999-06-03 Mosaic Technologies Devices and methods for detecting target molecules in biological samples
CA2321223A1 (en) * 1998-02-25 1999-09-02 National University Of Ireland, Cork Hla linked pre-eclampsia and miscarriage susceptibility gene
WO1999045374A2 (en) 1998-03-03 1999-09-10 Mosaic Technologies Purification and detection processes using reversible affinity electrophoresis
US6228596B1 (en) * 1998-03-05 2001-05-08 Diadexus, Inc. Method of detecting and monitoring endometrial and uterine cancers
EP1086247A2 (en) 1998-06-16 2001-03-28 Exact Laboratories, Inc. Methods for the detection of nucleic acids
AU760236B2 (en) 1998-06-18 2003-05-08 Exact Sciences Corporation Denaturing gradient affinity electrophoresis and methods of use thereof
AU762049B2 (en) 1998-06-19 2003-06-19 Exact Sciences Corporation Detection of non-viral organisms with SRP RNA
US6037130A (en) * 1998-07-28 2000-03-14 The Public Health Institute Of The City Of New York, Inc. Wavelength-shifting probes and primers and their use in assays and kits
US20020001800A1 (en) * 1998-08-14 2002-01-03 Stanley N. Lapidus Diagnostic methods using serial testing of polymorphic loci
AU1704000A (en) 1998-08-14 2000-03-14 Exact Laboratories, Inc. Method for diagnostic screening
AU6412799A (en) 1998-10-05 2000-04-26 Mosaic Technologies Reverse displacement assay for detection of nucleic acid sequences
US20030044780A1 (en) * 1998-11-23 2003-03-06 Stanley N. Lapidus Primer extension methods utilizing donor and acceptor molecules for detecting nucleic acids
US20020048752A1 (en) * 1998-11-23 2002-04-25 Stanley N. Lapidus Methods for detecting lower-frequency molecules
WO2000032820A1 (en) 1998-11-23 2000-06-08 Exact Laboratories, Inc. Method for detecting target sequences in small proportions in heterogeneous samples
US6503718B2 (en) 1999-01-10 2003-01-07 Exact Sciences Corporation Methods for detecting mutations using primer extension for detecting disease
US6280947B1 (en) 1999-08-11 2001-08-28 Exact Sciences Corporation Methods for detecting nucleotide insertion or deletion using primer extension
AU752817B2 (en) * 1999-02-25 2002-10-03 Exact Sciences Corporation Methods for preserving DNA integrity
WO2000050870A1 (en) 1999-02-26 2000-08-31 Mosaic Technologies Biochemical purification devices with immobilized capture probes and their uses
EP1235930A2 (en) 1999-04-02 2002-09-04 Mosaic Technologies Electrophoretic analysis of target molecules using adapter molecules
JP4794052B2 (en) 1999-04-09 2011-10-12 ジェンザイム・コーポレーション Method for detecting a nucleic acid that is an indicator of cancer
AU4669600A (en) 1999-05-03 2000-11-17 Exact Laboratories, Inc. Stool specimen collector
US20010039012A1 (en) 1999-06-14 2001-11-08 Lapidus Stanley N. Methods for diagnostic screening
US6440706B1 (en) 1999-08-02 2002-08-27 Johns Hopkins University Digital amplification
US6586177B1 (en) 1999-09-08 2003-07-01 Exact Sciences Corporation Methods for disease detection
US6849403B1 (en) * 1999-09-08 2005-02-01 Exact Sciences Corporation Apparatus and method for drug screening
CA2394921A1 (en) * 1999-12-07 2001-06-14 Anthony P. Shuber Supracolonic aerodigestive neoplasm detection
US6919174B1 (en) * 1999-12-07 2005-07-19 Exact Sciences Corporation Methods for disease detection
US6911308B2 (en) * 2001-01-05 2005-06-28 Exact Sciences Corporation Methods for detecting, grading or monitoring an H. pylori infection
US6428964B1 (en) 2001-03-15 2002-08-06 Exact Sciences Corporation Method for alteration detection
US20030049659A1 (en) * 2001-05-29 2003-03-13 Lapidus Stanley N. Devices and methods for isolating samples into subsamples for analysis
US20030039012A1 (en) * 2001-08-21 2003-02-27 Pezzaniti Joseph L. Communication system and method to avoid laser-pulse broadening by multi-path effects
US20070020513A1 (en) * 2001-10-04 2007-01-25 Ise Corporation Energy Storage Cell Support Separator and Cooling System for a Multiple Cell Module

Patent Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US3413464A (en) * 1965-04-29 1968-11-26 Ibm Method for measuring the nucleic acid in biological cells after enhancement in an acidic solution
WO1996023895A1 (en) * 1995-02-01 1996-08-08 Board Of Regents, The University Of Texas System Detecting dna damage, measuring dna repair rates, and monitoring dna repair enzyme activity
WO1999007895A1 (en) * 1997-08-06 1999-02-18 Ludwig Institute For Cancer Research Methods for quantifying nucleic acid molecules

Non-Patent Citations (3)

* Cited by examiner, † Cited by third party
Title
ALLEN R TODD ET AL: "Morphological and biochemical characterization and analysis of apoptosis.", JOURNAL OF PHARMACOLOGICAL AND TOXICOLOGICAL METHODS, vol. 37, no. 4, 1997, pages 215 - 228, XP000992780, ISSN: 1056-8719 *
GIACONA MARY BETH ET AL: "Cell-free DNA in human blood plasma: Length measurements in patients with pancreatic cancer and healthy controls.", PANCREAS, vol. 17, no. 1, July 1998 (1998-07-01), pages 89 - 97, XP000992791, ISSN: 0885-3177 *
SCHMITT ESTELLE ET AL: "Bax-alpha promotes apoptosis induced by cancer chemotherapy and accelerates the activation of caspase 3-like cysteine proteases in p53 double mutant B lymphoma Namalwa cells.", CELL DEATH AND DIFFERENTIATION, vol. 5, no. 6, June 1998 (1998-06-01), pages 506 - 516, XP000886123, ISSN: 1350-9047 *

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US9109256B2 (en) 2004-10-27 2015-08-18 Esoterix Genetic Laboratories, Llc Method for monitoring disease progression or recurrence

Also Published As

Publication number Publication date
JP2010279394A (en) 2010-12-16
DE60042695D1 (en) 2009-09-17
US20100151478A1 (en) 2010-06-17
ATE438737T1 (en) 2009-08-15
CA2384368A1 (en) 2001-03-15
EP2110442A1 (en) 2009-10-21
AU7827600A (en) 2001-04-10
EP1212468A2 (en) 2002-06-12
US20040014104A1 (en) 2004-01-22
WO2001018252A2 (en) 2001-03-15
ES2329543T3 (en) 2009-11-27
US6586177B1 (en) 2003-07-01
US20070202513A1 (en) 2007-08-30
JP2003508083A (en) 2003-03-04
EP1212468B1 (en) 2009-08-05
US7811757B2 (en) 2010-10-12

Similar Documents

Publication Publication Date Title
WO2001018252A3 (en) Methods for disease detection
WO2001042502A3 (en) Methods for disease detection
WO2001042504A3 (en) Detection of extracellular tumor-associated nucleic acid in blood plasma or serum
WO2006117161A3 (en) New labelling strategies for the sensitive detection of analytes
WO2000023614A8 (en) Method for monitoring proteasome inhibitor drug action
EP2267136A3 (en) Glyphosate tolerant alfalfa events and methods for detection thereof
WO2001061043A3 (en) Parallel genotyping of multiple patient samples
IL147038A0 (en) Genomic profiling: a rapid method for testing a complex biological sample for the presence of many types of organisms
AU2001264811A1 (en) Methods for genetic analysis of dna to detect sequence variances
AU2002243254A1 (en) Systems and methods for cardiovascular imaging, cardiovascular functional analysis, and detecting coronary artery disease
WO2006002243A3 (en) Methods of oligosaccharide profiling for the detection of cancer
WO2002037112A3 (en) Detection of ovarian cancer
WO2004057336A3 (en) Use of nicotinamide n-methyltransferase as a marker for colorectal cancer
IL143098A0 (en) A method of detecting the presence of an analyte in a biological sample
MXPA01005698A (en) Assay for anti transglutaminase antibodies detection useful in celiac disease diagnosis.
WO2006089219A3 (en) Neoepitope detection of disease using protein arrays
WO2000068424A3 (en) Means for detecting and treating pathologies linked to fgfr3
WO2003031942A8 (en) Reagents and methods useful for detecting diseases of the breast
WO2002058533A3 (en) Process for determining target function and identifying drug leads
WO2001042503A3 (en) Apparatus and methods for drug screening based on nucleic acid analysis
AU3092202A (en) Non-invasive method for detecting target rna
AU2001285717A1 (en) Microsensors and method for detecting target analytes
AU2002223169A1 (en) Method for detecting molecules or chemical reactions by determining variation ofconductance
WO2005040806A3 (en) Use of protein asc as a marker for breast cancer
AU2261601A (en) Method for the simultaneous analysis and detection of multiple analytes by microidentification

Legal Events

Date Code Title Description
AK Designated states

Kind code of ref document: A2

Designated state(s): AU CA JP

AL Designated countries for regional patents

Kind code of ref document: A2

Designated state(s): AT BE CH CY DE DK ES FI FR GB GR IE IT LU MC NL PT SE

121 Ep: the epo has been informed by wipo that ep was designated in this application
DFPE Request for preliminary examination filed prior to expiration of 19th month from priority date (pct application filed before 20040101)
AK Designated states

Kind code of ref document: A3

Designated state(s): AU CA JP

AL Designated countries for regional patents

Kind code of ref document: A3

Designated state(s): AT BE CH CY DE DK ES FI FR GB GR IE IT LU MC NL PT SE

ENP Entry into the national phase

Ref country code: JP

Ref document number: 2001 521786

Kind code of ref document: A

Format of ref document f/p: F

WWE Wipo information: entry into national phase

Ref document number: 78276/00

Country of ref document: AU

WWE Wipo information: entry into national phase

Ref document number: 2384368

Country of ref document: CA

WWE Wipo information: entry into national phase

Ref document number: 2000968342

Country of ref document: EP

WWP Wipo information: published in national office

Ref document number: 2000968342

Country of ref document: EP