WO2001013112A1 - Melanocortin metallopeptide constructs, combinatorial libraries and applications - Google Patents

Melanocortin metallopeptide constructs, combinatorial libraries and applications Download PDF

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Publication number
WO2001013112A1
WO2001013112A1 PCT/US2000/016396 US0016396W WO0113112A1 WO 2001013112 A1 WO2001013112 A1 WO 2001013112A1 US 0016396 W US0016396 W US 0016396W WO 0113112 A1 WO0113112 A1 WO 0113112A1
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Prior art keywords
amino acid
metal ion
phe
lys
peptide
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PCT/US2000/016396
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French (fr)
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Shubh D. Sharma
Yi-Qun Shi
Wei Yang
Hui-Zhi Cai
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Palatin Technologies, Inc.
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Priority to US10/049,718 priority Critical patent/US7049398B1/en
Priority to AU58742/00A priority patent/AU5874200A/en
Priority to CA002379647A priority patent/CA2379647A1/en
Priority to JP2001517163A priority patent/JP2004519410A/en
Priority to EP00944681A priority patent/EP1208377A4/en
Publication of WO2001013112A1 publication Critical patent/WO2001013112A1/en
Priority to US11/419,557 priority patent/US20060240481A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K5/00Peptides containing up to four amino acids in a fully defined sequence; Derivatives thereof
    • C07K5/04Peptides containing up to four amino acids in a fully defined sequence; Derivatives thereof containing only normal peptide links
    • C07K5/10Tetrapeptides
    • C07K5/1002Tetrapeptides with the first amino acid being neutral
    • C07K5/1016Tetrapeptides with the first amino acid being neutral and aromatic or cycloaliphatic
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P15/00Drugs for genital or sexual disorders; Contraceptives
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P15/00Drugs for genital or sexual disorders; Contraceptives
    • A61P15/10Drugs for genital or sexual disorders; Contraceptives for impotence
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P17/00Drugs for dermatological disorders
    • A61P17/16Emollients or protectives, e.g. against radiation
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P3/00Drugs for disorders of the metabolism
    • A61P3/04Anorexiants; Antiobesity agents
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K1/00General methods for the preparation of peptides, i.e. processes for the organic chemical preparation of peptides or proteins of any length
    • C07K1/04General methods for the preparation of peptides, i.e. processes for the organic chemical preparation of peptides or proteins of any length on carriers
    • C07K1/047Simultaneous synthesis of different peptide species; Peptide libraries
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/575Hormones
    • C07K14/655Somatostatins
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/665Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans derived from pro-opiomelanocortin, pro-enkephalin or pro-dynorphin
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K5/00Peptides containing up to four amino acids in a fully defined sequence; Derivatives thereof
    • C07K5/04Peptides containing up to four amino acids in a fully defined sequence; Derivatives thereof containing only normal peptide links
    • C07K5/10Tetrapeptides
    • C07K5/1002Tetrapeptides with the first amino acid being neutral
    • C07K5/1005Tetrapeptides with the first amino acid being neutral and aliphatic
    • C07K5/1008Tetrapeptides with the first amino acid being neutral and aliphatic the side chain containing 0 or 1 carbon atoms, i.e. Gly, Ala
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K5/00Peptides containing up to four amino acids in a fully defined sequence; Derivatives thereof
    • C07K5/04Peptides containing up to four amino acids in a fully defined sequence; Derivatives thereof containing only normal peptide links
    • C07K5/10Tetrapeptides
    • C07K5/1019Tetrapeptides with the first amino acid being basic
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K5/00Peptides containing up to four amino acids in a fully defined sequence; Derivatives thereof
    • C07K5/04Peptides containing up to four amino acids in a fully defined sequence; Derivatives thereof containing only normal peptide links
    • C07K5/10Tetrapeptides
    • C07K5/1024Tetrapeptides with the first amino acid being heterocyclic

Definitions

  • the present invention relates to metallopeptides, metal ion-complexed peptidomimetics, and metallo-constructs, including metallopeptide combinatorial libraries, metal ion-complexed peptidomimetic and peptide-like combinatorial libraries and metallo-construct combinatorial libraries, specific for meianocortin receptors, including methods for the use and making of the same.
  • the invention also relates to methods for synthesizing and assembling such libraries, and methods for identification and characterization of library constituents which are capable of binding a meianocortin receptor of interest, or mediating a meianocortin receptor-related biological activity of interest.
  • Meianocortin Receptors A family of meianocortin receptor types and subtypes have been identified, including melanocortin-1 receptors (MC1-R) expressed on normal human melanocytes and melanoma cells, melanocortin-2 receptors (MC2-R) for ACTH (adrenocorticotropin) expressed in cells of the adrenal gland, melanocortin-3 and melanocortin-4 receptors (MC3-R and MC4-R) expressed primarily in cells in the hypothalamus, mid-brain and brainstem, and melanocortin-5 receptors (MC5-R), expressed in a wide distribution of peripheral tissues.
  • MC1-R melanocortin-1 receptors
  • M2-R melanocortin-2 receptors
  • ACTH adrenocorticotropin
  • MC3-R and MC4-R melanocortin-3 and melanocortin-4 receptors
  • MC5-R melanocor
  • Multivalent melanotropic peptide and fluorescent macromolecular conjugates new reagents for characterization of melanotropin receptors. Bioconjug Chem 5:591-601 , 1994; Sharma SD, Jiang J, Hadley ME, et al. Melanotropic peptide- conjugated beads for microscopic visualization and characterization of melanoma melanotropin receptors. Proc Natl Acad Sci U S A 93(24):13715-13720, 1996).
  • the presence of MC1-R has been demonstrated in human melanoma cells by an antibody to MC1-R (Xia Y, Skoog V, Muceniece R, et al.
  • MC1-R is a G protein-coupled, 7-transmembrane receptor expressed in skin-cell melanocytes and shares some degree of homology with related receptors MC2-R, MC3-R, MC4-R and MC5-R. Each of these receptors can bind various peptide analogs that contain a common melanotropic pharmacophore, His-Phe-Arg-Trp, which describes the 6-9 sequence of the alpha- melanocyte stimulating hormone ( ⁇ -MSH).
  • ⁇ -MSH alpha- melanocyte stimulating hormone
  • ⁇ -MSH analogs Prior to molecular characterization of the MC receptors, ⁇ -MSH analogs were labeled with the radioisotope lndium-111 and used in melanoma imaging studies (Wraight EP, Bard DR, Maughan TS, et al. The use of a chelating derivative of alpha melanocyte stimulating hormone for the clinical imaging of malignant melanoma. Brit J Radiology 65: 112-118, 1992; Bard DR, Knight CG and Page-Thomas DP. A chelating derivative of alpha-melanocyte stimulating hormone as a potential imaging agent for malignant melanoma. Brit J Cancer 62:919-922, 1990; Bard DR, Knight CG, Page-Thomas DP.
  • MC4-R is also a G protein-coupled, 7-transmembrane receptor, but is believed to be expressed primarily in the brain.
  • Alpha-MSH has been described as a potent anti-inflammatory agent in all major forms of inflammation (Star RA, Rajora N, Huang J, Stock RC, Catania A, and Lipton JM: Evidence of autocrine modulation of macrophage nitric oxide synthase by alpha-melanocyte stimulating hormone. Proc Natl Acad Sci U S A 92:8016-8020, 1995; Getting SJ, and Perretti M: MC3-R as a novel target for antiinflammatory therapy. Drug News and Perspectives 13:19-27, 2000). Implication of both MC1-R and MC3-R receptors in anti-inflammatory processes has been stressed. In particular, the activation of these MC receptors by meianocortin receptor agonists has been reported to inhibit the expression of nitric oxide synthase and subsequent nitric oxide production.
  • PCT/US98/03298 iodo group-containing meianocortin receptor-specific linear peptide
  • PCT/GB99/01388 MC1 -R specific linear peptides
  • PCT/GB99/01195 MC3-R, MC4-R and MC5-R specific cyclic peptides
  • PCT/US99/04111 MC1-R specific peptide antagonists for melanoma therapy
  • PCT/US99/09216 isoquinoline compounds as meianocortin receptor ligands
  • PCT/US99/13252 spiropiperdine derivatives as meianocortin receptor agonists
  • 6,054,556 (cyclic lactam peptides as MC1-R, MC3-R, MC4-R and MC5-R antagonists).
  • a large number of patents teach various methods of screening and determining meianocortin receptor- specific compounds, as for example International Patent Applications No. PCT/US97/15565, PCT/US98/12098 and PCT/US99/16862 and U.S. Patents No. 5,932,779 and 5,994,087.
  • compounds specific for MC1-R are believed to be useful for treatment of melanoma, including use as radiotherapeutic or drug delivery agent, and as diagnostic imaging agents, particularly when labeled with a diagnostic radionuclide.
  • Compounds specific for MC3-R, MC4-R or MC5-R are believed to be useful in regulation of energy homeostasis, including use as agents for attenuating food intake and body weight gain, for use in treatment of anorexia, as a weight gain aid, for treatment of obesity, and other treatment of other food intake and metabolism-related purposes.
  • Compounds specific for MC3-R and MC4-R, among other meianocortin receptors can be used as agents for treatment of sexual dysfunction, including male erectile dysfunction.
  • Compounds specific for MC3-R and MC4-R, among other meianocortin receptors can be used to regulate blood pressure, heart rate and other neurophysiologic parameters.
  • Other meianocortin receptor peptides can be used as tanning agents, to increase melanin production, such as peptides that are MCR-1 agonists.
  • Compounds specific for MCR-1 and MCR-3 may be useful in regulation of inflammatory processes.
  • ligands with high specificity for discrete meianocortin receptors as well as ligands or compounds that are either agonists or antagonists of specific meianocortin receptors.
  • High affinity peptide ligands of meianocortin receptors can be used to exploit varied physiological responses associated with the meianocortin receptors, either as agonists or antagonists.
  • meianocortin receptors have an effect on the activity of various cytokines, and high affinity peptide ligands of meianocortin receptors can be used to regulate cytokine activity.
  • the resin is mixed, processed for the next coupling, and again split into equal portions for separate reaction with individual reagents. The process is repeated as required to obtain a library of desired oligomeric length and size.
  • This approach is the basis of the "one-bead one-peptide" strategy which employs amino acid sequencing to ascertain the primary structure of the peptide on a hit bead in a bioassay. Automated systems have been developed for carrying out split synthesis of these libraries with rather more efficiency. A common artifact occasionally seen with all these resin bound libraries is altered target-specific affinity by some solid phase bound compounds in bioassays, which can result in totally misleading results.
  • Another strategy involves construction of soluble libraries. This strategy involves a deconvolution process of iterative re-synthesis and bioassaying until all the initially randomized amino acid positions are defined.
  • soluble libraries This strategy involves a deconvolution process of iterative re-synthesis and bioassaying until all the initially randomized amino acid positions are defined.
  • modifications to this strategy have been developed, including co-synthesis of two libraries containing orthogonal pools, which eliminates the need of iterative re-synthesis and evaluation.
  • a major limitation of the soluble library approach is its applicability to high affinity systems. The abundance of each compound in solution can be influenced by the total number of compounds in a library that can affect the biological activity. For this reason, a highly active compound in any pool may not in fact be the most potent molecule. Lack of reasonable solubilities of certain members in a library may further influence this phenomenon.
  • peptide libraries remain the most versatile because of the structural diversity offered by the use of naturally occurring amino acids, incorporation of a variety of "designer” amino acids, and the high efficiency and ease with which peptide synthesis can be accomplished.
  • Another level of structural diversity in peptide-based libraries has been added by post-synthesis modification of the libraries. These modifications include permethylation, acylation, functionalization of the side chain functionality, and reductive amination of the N-terminus.
  • the invention provides a construct comprising a metal ion-binding domain comprising two or more linked residues forming an N 3 S ! ligand available for complexing with a metal ion, wherein the construct is conformationally constrained in a structure specific for one or more meianocortin receptors upon complexing the metal ion-binding domain with a metal ion.
  • the invention provides a manufactured peptide and pharmaceutically acceptable salts thereof comprising a metal ion-binding domain comprising two or more contiguous amino acids and a determined biological-function domain specific for one or more meianocortin receptors, wherein at least a portion of said biological-function domain is co-extensive with at least a portion of the metal ion-binding domain, and wherein said biological-function domain is conformationally constrained upon complexing the metal ion-binding domain with a metal ion.
  • the invention provides a combinatorial library targeted to meianocortin receptors of different sequence peptide members synthesized on solid phase, where each constituent library member comprises:
  • a peptide sequence of three or more amino acid residues bound to solid phase characterized by (i) a sequence of two or more amino acid residues forming a metal ion-binding domain and including at least one amino acid residue containing at least one S wherein the said S is protected by an orthogonal S-protecting group, (ii) a sequence of one or more amino acid residues at the N- or C- terminus of the metal ion-binding domain, or at both the N- and C-terminus of the metal ion-binding domain, and (iii) a cleavable bond attaching the peptide sequence to solid phase; and
  • the invention provides a combinatorial library targeted to meianocortin receptors of different sequence peptidomimetic members synthesized on solid phase, where each constituent library member comprises:
  • a peptidomimetic sequence of a combination of three or more amino acid residues and mimics of amino acid residues bound to solid phase characterized by (i) a sequence of two or more amino acid residues, mimics of amino acid residues or combinations thereof forming a metal ion-binding domain and including at least one amino acid residue or mimic of an amino acid residue containing at least one S wherein the said S is protected by an orthogonal S-protecting group, (ii) a sequence of one or more amino acid residues, mimics of amino acid residues or combinations thereof at the N- or C- terminus of the metal ion-binding domain, or at both the N- and C-terminus of the metal ion-binding domain, and (iii) a cleavable bond attaching the peptidomimetic sequence to solid phase; and
  • the invention provides a combinatorial library targeted to meianocortin receptors of different sequence peptide or peptidomimetic members synthesized in solution, where each constituent library member comprises: (a) a peptidomimetic sequence of a combination of three or more amino acid residues and mimics of amino acid residues bound to solid phase characterized by (i) a sequence of two or more amino acid residues, mimics of amino acid residues or combinations thereof forming a metal ion-binding domain and including at least one amino acid residue or mimic of an amino acid residue containing at least one S wherein the said S is protected by an orthogonal S-protecting group, (ii) a sequence of one or more amino acid residues, mimics of amino acid residues or combinations thereof at the N- or C- terminus of the metal ion-binding domain, or at both the N- and C-terminus of the metal ion-binding domain; and
  • compositions of this invention include compositions of the formulas:
  • Ri is any functionality that potentiates the intrinsic activity of the remainder of the molecule, including but not limited to providing an auxiliary or secondary receptor contact. Any of a variety of amino acids and non-peptide groups may be employed, including an amino acid chain from one to about four neutral or charged L- or D-configuration amino acid residues. If R-, is a non-peptide group, it may be a linear or branched alkyl, aryl, alkene, alkenyl or aralkyl chain;
  • Aaa is an L- or D-configuration cationic amino acid with a positively charged side chain.
  • Preferred amino acids include L-configuration Lys, Arg, Orn, Dpr or Dbu, and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids.
  • Aaa provides an N (nitrogen atom) for metal ion complexation;
  • Bbb is an L- or D-configuration amino acid with an aromatic side chain.
  • Preferred amino acids include D-configuration Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nitro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl), or
  • Bbb may be functionalized with halogen, alkyl or aryl groups.
  • Bbb provides an N for metal ion complexation
  • Ccc is an amino acid that provides both an N, from the alpha amino group, and an S (sulfur atom), from a side chain group, for metal ion complexation.
  • Preferred amino acids include L- or D- configuration Cys, Pen and Hcys;
  • Lll is a D-configuration ammo acid with an aromatic side chain
  • Preferred ammo acids include D- configuration Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-n ⁇ tro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl), or Tyr(BzlCI 2 ), and derivatives, analogs or homologs thereof
  • the aromatic ring in Lll may be functionalized with halogen, alkyl
  • R 2 is an ammo acid with an aromatic side chain
  • Preferred ammo acids include L- or D-configuration Phe, Trp, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-n ⁇ tro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl) or Tyr(BzlCI 2 ), and derivatives, analogs or homologs thereof, including both natural and synthetic ammo acids
  • the ammo acids include L- or D-configuration Phe, Trp, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-n ⁇ tro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl,
  • R 2 may also be the corresponding des-carboxyl ammo acid of any of the foregoing Alternatively, R 2 may be eliminated,
  • Ddd is an ammo acid that provides an S, from a side chain group, for metal ion complexation
  • Preferred ammo acids include L- or D-configuration Cys, Pen and Hcys
  • R 3 is an ammo acid with an aromatic side chain that provides an N for metal ion complexation
  • Preferred ammo acids include L- or D-configuration Phe, Trp, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-n ⁇ tro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl) or Tyr(BzlCI 2 ), and derivatives, analogs or homologs thereof, including both natural and synthetic ammo acids
  • the C-terminus may be free or amidated
  • R 4 is a functionality that provides a cationic center
  • Preferred ammo acids include L- or D- configuration Lys, Arg, Orn, Dpr or Dbu, and derivatives, analogs or homologs thereof, including both natural and synthetic ammo acids
  • the N-termmus of the ammo acid may be functionalized with any of a variety of neutral ammo acid and non-peptide groups, including linear or branched alkyl, aryl, alkene, alkenyl or aralkyl chains,
  • Eee is an uncharged L- or D-configuration ammo acid that provides an N for metal ion complexation
  • Preferred ammo acids include Gly and L-configuration Ala, Nle, Leu, Val, Phe or Trp, and derivatives, analogs or homologs thereof, including both natural and synthetic ammo acids
  • Eee isn an ammo acid with an aliphatic side chain
  • Fff is an L- or D-configuration aromatic ammo acid
  • Preferred ammo acids include D-configuration Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-n ⁇ tro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl), Tyr(BzlCI
  • Ggg is an L- or D-configuration aromatic ammo acid
  • Preferred ammo acids include L-configuration Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-n ⁇ tro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl) or Tyr(BzlCI 2 ), and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids.
  • the aromatic ring in Ggg may be substituted with halogen, alkyl or aryl groups.
  • Ggg provides an N for metal ion complexation;
  • R 5 is preferably an amide, substituted amide, ester or carboxylate group.
  • R 5 may also be and L- or D- configuration amino acid or amino acid amide, including an aromatic, aliphatic, neutral or charged amino acid;
  • Hhh is an L- or D-configuration cationic amino acid with a positively charged side chain.
  • Preferred amino acids include L-configuration Lys, Arg, Orn, Dpr or Dbu, and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids.
  • Hhh does not provide an N for metal ion complexation;
  • Iii is an L- or D-configuration amino acid that provides an N for metal ion complexation.
  • Preferred amino acids includes Ala, Gly, Nle, Val. Leu, lie, His, Lys, or Arg, and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids; Jjj is an L- or D-configuration amino acid with an aromatic side chain.
  • Preferred amino acids include D- configuration Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nitro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl), or Tyr(BzlCI 2 ), and derivatives, analogs or homologs thereof.
  • the aromatic ring in Jjj may be functionalized with halogens, alkyl or aryl groups. Jjj does not provide an N for metal ion complexation; and
  • Kkk is an L- or D-configuration cationic amino acid with a positively charged side chain.
  • Preferred amino acids include L-configuration Lys, Arg, Orn, Dpr or Dbu, and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids.
  • Aaa does not provide an N for metal ion complexation.
  • the metal ion-binding domain can be complexed with a metal ion, and such compositions are included within the invention.
  • the invention further includes compositions wherein the composition is substantially more specific for one or more meianocortin receptors when the metal ion-binding domain is complexed with a metal ion than is the composition when the metal ion-binding amino acid sequence is not complexed with a metal ion.
  • the combinatorial libraries of this invention include libraries wherein the metal ion-binding domain further comprises at least one N available for binding to a metal ion upon removal of the orthogonal S-protecting group.
  • the combinatorial libraries include compositions wherein the metal ion- binding domain comprises three residues forming an N ⁇ ligand.
  • the orthogonal S-protecting group is S-thio-butyl, acetamidomethyl, 4-methoxytrityl, S-sulfonate or 3-nitro-2-pyr idinesulfenyl.
  • the orthogonal S-protecting group may be removed from constituent library members thereof without otherwise altering the constituent library members or any amino acid side chain protecting group therein.
  • structural diversity may occurs in the metal ion-binding domain or outside the metal ion-binding domain.
  • one or more constituent library members may include at least one amino acid residue or mimic of an amino acid residue in the sequence at the N- or C-terminus of the metal ion-binding domain containing at least one S wherein the said S is protected by a non-orthogonal S-protecting group, whereby the orthogonal S-protecting group may be removed without removing the non-orthogonal S-protecting group.
  • the amino acid residue containing at least one S wherein the said S is protected by an orthogonal S-protecting group can be an L- or D-3-mercapto amino acid, including but not limited to L- or D-cysteine or L- or D-penicillamine.
  • the residue containing at least one S wherein the said S is protected by an orthogonal S-protecting group can be an L- or D-3- mercapto amino acid, including but not limited to L- or D-cysteine or L- or D-penicillamine; 3-mercapto phenylananine; 2-mercaptoacetic acid; 3-mercaptopropionic acid; 2-mercaptopropionic acid; 3- mercapto-3, 3, -dimethyl propionic acid; 3-mercapto-3,3,-diethyl proprionic acid; 3-mercapto,3-methyl propionic acid; 2-mercapto,2-methyl acetic acid; 3-cyclopentamethlene, 3-mercaptopropionic acid; or 2- cyclopentamethlene,2-mercaptoacetic acid.
  • L- or D-3- mercapto amino acid including but not limited to L- or D-cysteine or L- or D-penicillamine
  • 3-mercapto phenylananine 2-mercapto
  • Another object of this invention is to provide peptide-metal ion complexes specific for meianocortin receptors and which have a higher level of stability and are less susceptible to proteolysis than either the uncomplexed peptide, or other peptides known in the art.
  • Another object of this invention is to provide peptide-metal ion complexes that are specific for different subsets of meianocortin receptors, such as specific only for MC1-R or for MC4-R.
  • Another object of this invention is to provide peptide-metal ion complexes which are specific for meianocortin receptors and which are agonists or antagonists.
  • Another object of this invention is to provide for peptide analogs which are not conformationally restricted in the absence of a metal ion, whereby the uncomplexed peptide analog is either inactive or demonstrates low potency, but which is conformationally restricted on complexation with a metal ion and specific for meianocortin receptors with high potency.
  • Another object of this invention is to utilize metal complexation in a peptide specific for meianocortin receptors to cause specific regional conformational restrictions in the peptide so that the peptide conformation at the metal binding site is conformationally fixed on metal complexation.
  • Another object of this invention is to complex a peptide to a metal ion, whereby the resulting metallopeptide is specific for meianocortin receptors, and exhibits a preferred in vivo biodistribution profile, rate and mode of clearance, bioavailability and pharmacokinetics in mammals.
  • Another object of this invention is to provide peptide-metal ion complexes specific for meianocortin receptors utilizing stable non-radioactive metal ions, for use in therapeutic treatment of disease, including as an agent to modify energy metabolism and feeding behavior, such as for treatment of pathologic obesity and related conditions.
  • Another object of this invention is to provide peptide-metal ion complexes specific for meianocortin receptors utilizing metal ions which are radionuclides for use in diagnostic methods, including imaging and staging of melanoma tumors and melanoma tumor metastases.
  • Another object of this invention is to provide peptide-metal ion complexes specific for meianocortin receptors utilizing stable non-radioactive metal ions, for use as a prevention agent against ultra-violet radiation-induced DNA damages, including sunlight-induced DNA damage in the skin.
  • Another object of this invention is to provide peptide-metal ion complexes specific for meianocortin receptors utilizing stable non-radioactive metal ions, for use as a tanning agent, including but not limited to therapeutic use as a tanning agent.
  • Another object of this invention is to provide peptide-metal ion complexes specific for meianocortin receptors utilizing stable non-radioactive metal ions, for use as anti-inflammatory agents.
  • Another object of this invention is to complex peptides with radiometal ions, including but not limted to technetium-99m, for use in diagnostic imaging, so that the resulting peptide-metal ion complex is substantially more specific for meianocortin receptors than the uncomplexed peptide molecule, and the resulting radiolabeled species is essentially carrier-free in terms of specificity for meianocortin receptors.
  • Another object of this invention is to complex peptides with radiometal ions, including radioisotopes of rhenium such as rhenium-186 and rhenium-188, for use in targeted radiotherapy, such as for treatment of melanoma.
  • Another object of this invention is to provide peptide-metal ion complexes specific for meianocortin receptors that can transit the gut-blood barrier, without significant enzymatic or peptidase degradation, and may be adapted for oral administration.
  • Another object of this invention is to provide libraries of conformationally constrained peptide- metal ion complexes directed to meianocortin receptors.
  • Another object of this invention is to provide combinatorial peptide libraries of peptide-metal ion complexes specific for meianocortin receptors, wherein the peptides include a metal ion-binding domain, such that a specific conformational restriction is obtained upon labeling the peptides with a metal ion.
  • Another object of this invention is to provide combinatorial peptide libraries of peptide-metal ion complexes specific for meianocortin receptors, wherein the amino acids comprising the peptides may be naturally occurring amino acids, isomers and modifications of such amino acids, non-protein amino acids, post-translationally modified amino acids, enzymatically modified amino acids, constructs or structures designed to mimic amino acids, and the like, so that the library includes pseudopeptides and peptidomimetics.
  • Another object of this invention is to provide metallopeptide libraries specific for one or more meianocortin receptors, wherein the metallopeptides include a metal ion-binding domain, such that a determined conformational restriction is obtained upon labeling the peptides with a metal ion, and the metallopeptides further include distinct, unique and different amino acid sequences.
  • Another object of this invention is to provide both soluble and solid phase metallopeptide libraries specific for one or more meianocortin receptors, wherein the metallopeptides include a metal ion-binding domain.
  • Another object of this invention is to provide methods for synthesis of peptides specific for meianocortin receptors wherein the peptide contains a reactive SH group forming a part of a metal ion- binding domain, whereby the reactive SH group is protected during synthesis, and is deprotected only upon complexing the peptides with a metal ion.
  • Another object of this invention is to provide combinatorial metallopeptide libraries specific for meianocortin receptors wherein the peptides forming the library contain a reverse turn structure as a consequence of metal ion complexation.
  • Another object of this invention is to provide a method for rapid and efficient complexation of a pool of diverse peptides specific for meianocortin receptors with a metal ion, including a rhenium metal ion.
  • Another object of this invention to provide libraries of conformationally constrained peptide-metal ion complexes as surrogates for reverse turn structures, such as beta turns and gamma turns commonly found in naturally occurring peptides and proteins specific for meianocortin receptors.
  • the turns formed as a consequence of metal ion complexation are more stable than the naturally occurring turn structures, which are stabilized only by weaker interactions such as van der Waals' interactions and hydrogen bonds.
  • Another object of this invention is to provide combinatorial metallopeptide libraries wherein each of the peptides forming the library contain a reverse turn structure as a consequence of metal ion complexation.
  • Another object of this invention is to provide a method for the identification of specific metallopeptides through internal signatures resulting from use of metal ions with two or more isotopic peaks, such as through use of rhenium containing two isotopes in fixed relative abundance that differ in mass by 2 units.
  • Fig. 1 is a molecular structure for Template 1.
  • Fig. 2 is a molecular structure for Template 2.
  • Fig. 3 is a molecular structure for Template 3.
  • Fig. 4 is a molecular structure for Template 4.
  • Fig. 5 is a molecular structure for Template 5.
  • Fig. 6 is a molecular structure for Template 6.
  • Fig. 7 is a molecular structure for Template 7.
  • Fig. 8 is a flow chart of a split pool and combination synthesis method according to Example 2.
  • Fig. 9 is a mass spectrum of a library pool of 25 metallopeptides synthesized according to Example 2.
  • Fig. 10 is a mass spectrum of a library pool of 4 metallopeptides synthesized according to Example 6.
  • Figs. 11 A - 11 E are reversed phased HPLC profiles of a library pool of 4 metallopeptides synthesized according to Example 6.
  • binding binding
  • complexing complexing
  • the "peptides" of this invention can be a) naturally-occurring, b) produced by chemical synthesis, c) produced by recombinant DNA technology, d) produced by biochemical or enzymatic fragmentation of larger molecules, e) produced by methods resulting from a combination of methods a through d listed above, or f) produced by any other means for producing peptides
  • peptide as used throughout the specification and claims is intended to include any structure comprised of two or more ammo acids, including chemical modifications and derivatives of ammo acids
  • the peptides of this invention comprise fewer than 100 ammo acids, and preferably fewer than 60 ammo acids, and most preferably ranging from about 2 to 20 ammo acids
  • the ammo acids forming all or a part of a peptide may be naturally occurring ammo acids, stereoisomers and modifications of such ammo acids, non-protein am o acids, post-translationally modified ammo acids, enzymatically modified am o acids, constructs or structures designed to mimic ammo acids, and the like, so that the term “peptide” includes pseudopeptides and peptidomimetics, including structures which have a non-peptidic backbone
  • the term “peptide” also includes dimers or multimers of peptides
  • a "manufactured" peptide includes a peptide produced by chemical synthesis, recomb
  • am o acid used in this invention, and the term as used in the specification and claims, include the known naturally occurring protein am o acids, which are referred to by both their common three letter abbreviation and single letter abbreviation See generally Synthetic Peptides A User's Guide, GA Grant, editor, W H Freeman & Co , New York, 1992, the teachings of which are incorporated herein by reference, including the text and table set forth at pages 11 through 24
  • am o acid also includes stereoisomers and modifications of naturally occurring protein ammo acids, non-protein am o acids, post-translationally modified ammo acids, enzymatically synthesized ammo acids, de ⁇ vatized ammo acids, constructs or structures designed to mimic amino acids, and the like Modified and unusual ammo acids are described generally in Synthetic Peptides A User's Guide, cited above, Hruby VJ, Al-obeidi F and Kazmierski W Biochem J 268 249-262, 1990
  • a single ammo acid including stereoisomers and modifications of naturally occurring protein amino acids, non-protein ammo acids, post-translationally modified ammo acids, enzymatically synthesized ammo acids, de ⁇ vatized ammo acids, constructs or structures designed to mimic am o acids, and the like, including all of the foregoing, is sometimes referred to herein as a "residue"
  • the library constructs of this invention also include a metal ion, which may be an ionic form of any element in metallic form, including but not limited to metals and metalloids
  • the metal ion may, but need not, be radioactive, paramagnetic or superparamagnetic
  • the metal ion can be of any oxidation state of any metal, including oxidation states of vanadium (V), manganese (Mn), iron (Fe), cobalt (Co), nickel (Ni), copper (Cu), zinc (Zn), gallium (Ga), arsenic (As), selenium (Se), yttrium (Y), molybdenum (Mo), technetium (Tc), ruthenium (Ru), rhodium (Rh), palladium (Pd), silver (Ag), cadmium (Cd), indium (In), tin (Sn), tungsten (W), rhenium (Re), osmium (Os), iridium (Ir
  • the metal ion can also be a radionuclide of any of the foregoing, including In, Au, Ag, Hg, Tc, Re, Sn, At, Y and Cu.
  • a preferred metal ion with a tetradentate coordination sphere is Re.
  • an alpha-, gamma- or beta-emitting radionuclide may be employed.
  • the coordination sphere of various common metal ions in general, is tetradentate to hexadentate.
  • an amino acid or amino acid mimetic sequence is included within each library member such that it contains the desired number of groups (4 to 6 in most cases) for complexing with the metal.
  • the molecule is designed so that, upon complexing with a metal, it forms a mimic of a reverse turn structure about the site of metal complexation.
  • a metal with coordination number 4, 5 or 6, and complexing respectively with an amino acid sequence forming a tetra, penta, or hexadentate ligand, will fold and constrain the ligand.
  • the amino acid or amino acid mimetic sequence forming a ligand is defined as the metal ion-binding domain ("MBD") of the peptide or peptidomimetic.
  • MBD metal ion-binding domain
  • a highly flexible molecule like a peptide in other words, is folded to form a kind of reverse turn upon its complexation with a metal. This resulting turn is a highly constrained structure in the conformational sense.
  • the biological-binding domain ("BBD") of the peptide or peptidomimetic is defined in the specification and claims as a sequence of one or more amino acids which constitute a biologically active sequence, exhibiting binding to a melanocotin-associated receptor, including MC1-R, MC2-R, MC3-R, MC4-R and MC5-R, thereby constituting the peptide as a member of a specific binding pair.
  • the BBD also includes any sequence, which may be consecutive amino acids or mimetics (sychnological) or non- consecutive amino acids or mimetics (rhegnylogical) which forms a melanocortin-associated ligand, which ligand is capable of forming a specific interaction with its acceptor or receptor.
  • the term "receptor" is intended to include both acceptors and receptors.
  • the receptor may be a biological receptor.
  • the sequence or BBD may transmit a signal to the cells, tissues or other materials associated with the biological receptor after binding, but such is not required.
  • the BBD may be either an agonist or antagonist, or a mixed agonist-antagonist.
  • a peptide or peptidomimetic complexed to a metal ion with such a BBD constitutes a member of a "specific binding pair," which specific binding pair is made up of at least two different molecules, where one molecule has an area on the surface or in a cavity which specifically binds to a particular spatial and polar organization of the other molecule.
  • the members of a specific binding pair are referred to as ligand and receptor or anti-ligand.
  • the BBD is further defined to include the portion of a construct, wherein the construct is a peptidomimetic, peptide-like, or metallo-construct molecule, which upon binding of the construct with a metal ion, is biologically active, exhibiting binding to a meianocortin receptor found on cells, tissues, organs and other biological materials.
  • the BBD may, in this instance, be sychnological or rhegnylogical, and generally has the attributes and functions of a BBD of a peptide.
  • the BBD may be coextensive with all or a portion of the MBD, so that the same amino acids or other residues which constitute the MBD also constitute all or a part of the BBD. In some instances, one or amino acids of the MBD will form a part of the BBD, and one or more additional amino acids, which are not part of the MBD, form the remainder of the BBD.
  • Conformationai constraint refers to the stability and preferred conformation of the three- dimensional shape assumed by a peptide or other construct.
  • Conformationai constraints include local constraints, involving restricting the conformationai mobility of a single residue in a peptide; regional constraints, involving restricting the conformationai mobility of a group of residues, which residues may form some secondary structural unit; and global constraints, involving the entire peptide structure. See generally Synthetic Peptides: A User's Guide, cited above.
  • the primary structure of a peptide is its amino acid sequence.
  • the secondary structure deals with the conformation of the peptide backbone and the folding up of the segments of the peptide into regular structures such as ⁇ -helices, ⁇ -sheets, turns and the like.
  • the three-dimensional shape assumed by a peptide is directly related to its secondary structure. See generally Synthetic Peptides: A User's Guide, cited above, including the text, figures and tables set forth at pages 24-33, 39-41 and 58-67.
  • a global structure refers to a peptide structure which exhibits a preference for adopting a conformationally constrained three-dimensional shape.
  • the product resulting from the methods set forth herein can be used for both medical applications and animal husbandry or veterinary applications. Typically, the product is used in humans, but may also be used in other mammals.
  • the term "patient” is intended to denote a mammalian individual, and is so used throughout the specification and in the claims.
  • the primary applications of this invention involve human patients, but this invention may be applied to laboratory, farm, zoo, wildlife, pet, sport or other animals.
  • the products of this invention may optionally employ radionuclide ions, which may be used for diagnostic imaging purposes or for radiotherapeutic purposes.
  • Libraries of this invention contain constituents which are either locally or globally constrained structures. Libraries may include molecules with either local conformation restrictions or global conformation restrictions, or some combination thereof.
  • This aspect of the invention includes a variety of methods of synthesis, screening and structural elucidation of positive hits in screening systems. The importance of these aspects is well known to those skilled in the art and will also become evident from the following description and examples.
  • Coordinating groups in the peptide chain include nitrogen atoms of amme, amide, imidazole, or guanidmo functionalities, sulfur atoms of thiols or disulfides, and oxygen atoms of hydroxy, phenolic, carbonyl, or carboxyl functionalities
  • the peptide chain or individual ammo acids can be chemically altered to include a coordinating group, such as oxime, hydrazmo, sulfhydryl, phosphate, cyano, py ⁇ dino, pipe ⁇ dino, or morphohno groups
  • a tetrapeptide ammo acid sequence may be employed (such as G
  • a free thiol (SH) group is preferred for complexation of most metal ions to the peptides and peptidomimetics of this invention, and in many cases an SH group is necessary in order to form a stable exchange-inert complex with a metal Peptides and other organic molecules with free SH groups, however, are easily oxidized in air and in solution, and can often form a disulfide-linked dimer If more than one free SH group is present in a molecule, oxidation may lead to a complex polymer Similarly, if a mixture of different peptides or organic molecules with free SH groups are prepared, oxidation generally leads to a complex mixture of polymers of unknown composition This is of serious concern in preparing libraries of metallopeptides or other organic molecules where one or more SH group is intended for use in metal complexation
  • SH protecting groups have been employed for a variety of purposes, including radiopharmaceutical manufacture and formulation
  • S-Benzoyl- mercaptoacetyl-glycyl-glycyl-glycme Bz-MAG 3
  • Tc-99m 99m Tc
  • S-Bz protection is not compatible with the methods of peptide synthesis
  • metallopeptide libraries of this invention which incorporate an SH group
  • the peptides must be S-protected derivatives
  • the SH protecting group is chosen such that (a) the synthesis of peptide derivatives with S-protecting group is compatible with methods of solution and solid phase peptide synthesis, so that the S-protecting group is stable during synthetic procedures, and (b) the S-protecting group can be deprotected in situ, without cleavage from the resin in the case of solid phase synthesis, during the metal complexation step
  • Many prior art methods, such as Bz-MAG 3 meet at most only one of the two criteria specified above (Bz-MAG 3 meets only criterion (a) above)
  • orthogonally S-protected thiol groups permits synthesis of metallo-compounds in a single pot
  • a mixture of compounds, each compound containing an orthogonal S-protected group (“OSPG"), is used for complexation with a metal ion, and it is only during metal ion complexation that the S-protected group is deprotected, and accordingly polymerization and cross-linking is avoided
  • OSPG orthogonal S-protected group
  • S 4 Bu group is stable under both the acidic and basic conditions typically employed in peptide synthesis
  • the S ( Bu group may be cleaved by reduction using a suitable phosphme reagent, which reduction step may be employed immediately prior to or in conjunction with complexation of a metal ion to the peptide
  • Such OSPG cleavage does not cleave the peptide from the resin, or otherwise alter the structure of the peptide
  • Another OSPG meeting the criteria specified above and suitable for this invention employs an S- Acm (S-acetamidomethyl) group to protect the SH group
  • the Acm group is also stable under the acid and base conditions usually employed during peptide synthesis
  • the S-Acm group may be removed by treatment of S-Acm-protected peptide or peptide resin with mercury (II) acetate or silver (I) tertrafluoroborate, which liberates the thiol peptide in its mercury or silver ion-complexed state
  • Free thiol-containmg peptide can then be recovered by treating the mercury or silver ion and thiol complexed salts with an excess of a thiol-containmg reagent, such as beta-mercaptoethanol or dithiothreitol
  • a thiol-containmg reagent such as beta-mercaptoethanol or dithiothreitol
  • OSPGs for metallopeptides include 4-methoxytr ⁇ tyl (Mmt), 3-n ⁇ tro-2- py ⁇ dinesulfenyl (Npys) and S-sulfonate (S0 3 H) Mmt is selectively removed upon treatment with 1 % TFA in dichloromethane Npys and S-sulfonate are selectively removed by treatment with a thiol- containmg reagent such as beta-mercaptoethanol or dithiothreitol or a phosphme reagent such as tnbutyl phosphme
  • the Npys group (R G Simmonds RG et al Int J Peptide Protein Res, 43 363,1994) is compatible with Boc chemistry for peptide synthesis and the S-sulfonate (Maugras I et al Int J Peptide Protein Res, 45 152, 1995) is compatible with both Fmoc and Boc chemist
  • the complexation of metal ions to the sequences in a library, and specifically to the MBD is achieved by mixing the sequences with the metal ion This is conveniently done in solution, with the solution including an appropriate buffer
  • the metal ion is, when mixed with the peptide or peptidomimetic constituents, already in the oxidation state most preferred for complexing to the MBD
  • Some metal ions are complexed in their most stable oxidation state, such as calcium (II), potassium (I), indium (III), manganese (II), copper (II), zinc (II) and other metals
  • the metal must be reduced to a lower oxidation state in order to be complexed to the MBD This is true of ferrous, ferric, stannous, stannic, technet ⁇ umoxo[V], pertechnetate, rhen ⁇ umoxo[V], perrhenate and other similar metal ions Reduction may be performed prior to mixing with the sequences, simultaneously with mixing with
  • Solid phase resin bound peptide or peptidomimetic sequences may be labeled with rhenium ion by treatment with the rhenium transfer agent ReOCI 3 (PPh 3 ) 2 in the presence of 1 ,8-Diazabicyclo[5,4,0] undec-7-ene as a base. The sequences may then be cleaved from the resin.
  • peptide or peptidomimetic sequences in a soluble library may similarly be labeled by treatment with the rhenium transfer agent ReOCI 3 (PPh 3 ) 2 in the presence of 1 ,8-Diazabicyclo[5,4,0] undec-7-ene as a base.
  • Metal complexation in the presence of 1 ,8-Diazabicyclo[5,4,0]undec-7-ene (DBU) as a base can conveniently be accomplished at ambient room temperature.
  • a mild base such as sodium acetate
  • the thiol-containing sequence either in solution or bound to solid phase, is taken in a suitable solvent, such as DMF, NMP, MeOH, DCM or a mixture thereof, and heated to 60-70°C with the rhenium transfer agent ReOCI 3 (PPh 3 ) 2 in the presence of sodium acetate for 15 minutes.
  • a suitable solvent such as DMF, NMP, MeOH, DCM or a mixture thereof
  • ReOCI 3 rhenium transfer agent
  • other bases such as triethylamine, ammonium hydroxide and so on, may be employed.
  • MeOH is a preferred choice of solvent for rhenium complexation in the case of S- deprotected peptides in solution.
  • the solvent choice for S-deprotected peptides still attached to the solid phase is guided mainly by considerations of superior solvation (swelling) of the solid phase.
  • DMF and NMP may be employed.
  • Various mixtures of these solvents, also in combination with MeOH, and DCM, CHCI 3 and so on, may also be employed to yield optimized complexation results.
  • an S*Bu protected peptide is treated in situ with rhenium transfer agent in the presence of DBU and tributylphosphine to effect S-deprotection and rhenium complexation in one pot.
  • complexation of rhenium to the S l Bu protected peptide in the presence of rhenium perrhenate may be accomplished by treatment with Sn[ll]CI 2 .
  • This reagent effects S-deprotection as well as conversion of Re0 4 state to ReO state in situ to cause complexation of the rhenium to the S-deprotected peptide.
  • a preferred procedure in this invention is the use of S l Bu protected peptide with S-deprotection by treatment with tributylphosphine, and metal complexation of the resulting peptide utilizing ReOCI 3 (PPh 3 ) 2 in the presence of DBU at room temperature.
  • the MBD forms a reverse turn structure upon complexation with a metal ion, with the library constructed such that side chains of amino acids within the MBD are varied, and similarly amino acids not forming a part of the MBD are also varied.
  • Various compounds in a library of metallopeptides can be obtained by varying the sequence of amino acids in a set of peptides that are all optimized to form a complex of nearly similar geometry when coordinated with a metal ion. This optimization can be obtained, for example, by appropriate positioning of amino acids having high affinity to complex a metal ion. Examples of naturally occurring amino acids with high affinity for metal complexation include Cys and His.
  • a library of such peptides therefore, would have at least one of these amino acids that is suitably placed in the sequence, with this amino acid being common to all the molecules in the library, with this amino acid thus non-randomized.
  • a conceptual, generalized view of a solid phase library of metallopeptides that is constructed using local conformationai restriction is:
  • Ai and A 2 are amino acid side chains forming parts of the reverse turn structure which is the BBD, and "Peptide Chain” denotes one or more amino acids.
  • a similar library can also be constructed in which the components are soluble, and thus not bound to a resin.
  • Another embodiment of this invention provides for construction of a library with global conformationai restriction.
  • the MBD can be held constant, and a randomized or selected series of sequences of amino acids or mimetics varied to form the library.
  • This type of library encompasses metallopeptides in which a MBD is an isosteric replacement for a disulfide, lactam, lactone, thioether or thioester moiety in cyclic peptides.
  • a set MBD is introduced between two pre-selected ends of a linear peptide or peptidomimetic that contains the randomized or selected series of sequences of amino acids or mimetics under investigation.
  • the general structure of a metallopeptide library of this type is:
  • Peptide Chain (Containing Biological Function Domain)— Resin where M is a metal ion and A, and A 2 are structural elements that may provide additional stability to metal complexation, or may modulate biological activity, such as determining the organ of clearance, or altering biodistribution patterns or pharmacokinetics.
  • the "Peptide Chain” sequence may be randomly varied, thereby resulting in a random library, or may be directed in a predetermined fashion, based upon known characteristics of the target molecule.
  • One illustration of a globally-constrained metallopeptide library is a library of peptides wherein all the individual members of the library include a metal ion-binding domain and the library is directed specifically towards a family of meianocortin receptors.
  • the general formula of this library of peptides, before complexation to a metal ion is: A Aa Aa 2 - Aa 3 -A 2 ⁇ Res/n
  • X is a fixed MBD including a plurality of ammo acids, so that all of the valences of the metal ion are satisfied upon complexation of the metal ion with X
  • a T and A 2 each comprise from 0 to about 20 ammo acids
  • Aa ⁇ Aa 2 and Aa 3 each comprise one or more am o acids connected to X through an amide, thioether, thioester, ester, carbamate, or urethane bond, wherein each of Aa ⁇ Aa 2 and Aa 3 is varied
  • the MBD may include an OSPG
  • Other thiols in the sequence may optionally include S-protecting groups that are not orthogonal, such that the OSPG may be removed without removal of other S-protecting groups in the sequence
  • each these peptide libraries may also be obtained through the development of a library of non-ammo acid building blocks so as to result in structural mimics of these peptides
  • the peptide bonds may be replaced by pseudopeptide bonds, such as thioamides, thioethers, substituted amines, carbanate, urethane, aliphatic moieties, and functionally similar constructs
  • a peptide library is first assembled according to the sequence specification and degeneration, as described above, by well-known methods of peptide synthesis These libraries can be synthesized as discreet, spatially addressable compounds in parallel synthesis, using split synthesis approaches, or by deconvolution techniques of soluble libraries Using similar methods, a pseudopeptide, peptidomimetic or non-peptide library can be obtained.
  • the non-peptide libraries may also optionally incorporate one of various tagging approaches that are well known to those skilled in the art Both solid-phase and soluble libraries can be obtained in this manner
  • the entire library is then reacted with an appropriate metal- complexmg agent to obtain the corresponding metal-coordinated library, comprising a similar class of predetermined structures
  • the peptide library can be treated with Re(0)CI 3 (PPh 3 ) 2 in the presence of sodium acetate This procedure results in quantitative complexation of ReO with the peptide
  • a metallopeptide library constructed according to this invention can be screened to identify one or more receptor-bmdmg or pharmacologically-active meianocortin receptor-specific candidates by various techniques that have been reported in the prior art Both soluble and solid phase libraries may be directly employed in these assays These techniques include direct target binding approaches as described by Lam and coworkers (Lam KS et al: Nature 354:82-84, 1991 , Lam KS et al.
  • the deconvolution and iterative resynthesis approach may be directly applied to soluble metallopeptide libraries to elucidate the structure of a "hit," or peptide identified as a receptor-bmdmg or pharmacologically-active candidate in the screening process
  • the structure of hits can be directly determined by various strategies well known to those skilled in the art These include direct mass spectromet ⁇ c analysis of compounds covalently bound to solid phase matrix of particles by the use of matrix-assisted laser desorption/ionization (MALDI) techniques (Siuzdak G et al Bioorg Med Chem Lett 6:979, 1996, Brown BB et ai Molecular Diversity 1 -4-12, 1995)
  • MALDI matrix-assisted laser desorption/ionization
  • molecular templates which may be employed in this invention are shown below for tetradentate metal ion complexation
  • these molecular templates define groups of metallopeptides of this invention which, by substitution as provided, give rise to libraries of metallopeptides for use in determining meianocortin receptor-specific compounds, which may be either agonist or antagonist compounds
  • the templates are provided without the metal ion, it being understood that the compounds exhibit enhanced specificity for meianocortin receptors only upon metal ion complexation.
  • R-i is any functionality that potentiates the intrinsic activity of the remainder of the molecule, including but not limited to providing an auxiliary or secondary receptor contact. Any of a variety of amino acids and non-peptide groups may be employed, including an amino acid chain from one to about four neutral or charged L- or D-configuration amino acid residues. If R, is a non-peptide group, it may be a linear or branched alkyl, aryl, alkene, alkenyi or aralkyl chain.
  • Aaa is an L- or D-configuration cationic amino acid with a positively charged side chain.
  • Preferred amino acids include L-configuration Lys, Arg, Orn, Dpr or Dbu, and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids.
  • Aaa provides an N (nitrogen atom) for metal ion complexation.
  • Bbb is an L- or D-configuration amino acid with an aromatic side chain.
  • Preferred amino acids include D-configuration Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nitro), Phe(4'-methyl), Phe(4'- Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl), or Tyr(BzlCI 2 ), and derivatives, analogs or homologs thereof.
  • the aromatic ring in Bbb may be functionalized with halogen, alkyl or aryl groups.
  • Bbb provides an N for metal ion complexation.
  • Ccc is an amino acid that provides both an N, from the alpha amino group, and an S (sulfur atom), from a side chain group, for metal ion complexation.
  • Preferred amino acids include L- or D-configuration Cys, Pen and Hcys.
  • Lll is a D-configuration amino acid with an aromatic side chain.
  • Preferred amino acids include D-configuration Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nitro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl), or Tyr(BzlCI 2 ), and derivatives, analogs or homologs thereof.
  • the aromatic ring in Lll may be functionalized with halogen, alkyl or aryl groups. Lll does not provide an N for metal ion complexation.
  • R 2 is an amino acid with an aromatic side chain.
  • Preferred amino acids include L- or D- configuration Phe, Trp, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nitro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl) or Tyr(BzlCI 2 ), and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids.
  • the C- terminus may be free or amidated.
  • R 2 may also be the corresponding des-carboxyl amino acid of any of the foregoing. Alternatively, R 2 may be eliminated.
  • Fig. 1 depicts the structure of Template 1
  • Fig. 2 depicts the structure of Template 2, in both cases showing coordination with a tetradenate coordination sphere metal ion, resulting in an N 3 S- ⁇ metal ion bond.
  • Ddd is an amino acid that provides an S, from a side chain group, for metal ion complexation.
  • Preferred amino acids include L- or D-configuration Cys, Pen and Hcys.
  • R 3 is an amino acid with an aromatic side chain that provides an N for metal ion complexation.
  • Preferred amino acids include L- or D-configuration Phe, Trp, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nitro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl) or Tyr(BzlCI 2 ), and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids.
  • the C-terminus may be free or amidated.
  • R 3 may also be the corresponding des-carboxyl amino acid of any of the foregoing.
  • Fig. 3 depicts the structure of Template 3, showing coordination with a tetradenate coordination sphere metal ion, resulting in an N 3 S-
  • R 2 , Bbb and Ccc are as described above.
  • R 4 is a functionality that provides a cationic center.
  • Preferred amino acids include L- or D- configuration Lys, Arg, Orn, Dpr or Dbu, and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids.
  • the N-terminus of the amino acid may be functionalized with any of a variety of neutral amino acid and non-peptide groups, including linear or branched alkyl, aryl, alkene, alkenyl or aralkyl chains.
  • Eee is an uncharged L- or D-configuration amino acid that provides an N for metal ion complexation.
  • Preferred amino acids include Gly and L-configuration Ala, Nle, Leu, Val, Phe or Trp, and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids.
  • Eee isn an amino acid with an aliphatic side chain.
  • Fig. 4 depicts the structure of Template 4, showing coordination with a tetradenate coordination sphere metal ion, resulting in an N ⁇ metal ion bond.
  • Fff is an L- or D-configuration aromatic amino acid.
  • Preferred amino acids include D- configuration Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nitro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl), Tyr(BzlCI 2 ), Tic, Tiq or Tea, and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids.
  • the aromatic ring in Fff may be substituted with halogen, alkyl or aryl groups. Fff does not provide an N for metal ion complexation.
  • Ggg is an L- or D-configuration aromatic amino acid.
  • Preferred amino acids include L- configuration Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nitro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl) or Tyr(BzlCI 2 ), and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids.
  • the aromatic ring in Ggg may be substituted with halogen, alkyl or aryl groups.
  • Ggg provides an N for metal lon complexation
  • R 5 is preferably an amide, substituted amide, ester or carboxylate group
  • R 5 may also be and L- or D-configuration ammo acid or ammo acid amide, including an aromatic, aliphatic, neutral or charged ammo acid
  • Fig. 5 depicts the structure of Template 5, showing coordination with a tetradenate coordination sphere metal ion, resulting in an N 3 Si metal ion bond
  • Hhh is an L- or D-configuration cationic am o acid with a positively charged side chain
  • Preferred ammo acids include L-configuration Lys, Arg, Orn, Dpr or Dbu, and derivatives, analogs or homologs thereof, including both natural and synthetic ammo acids Hhh does not provide an N for metal ion complexation
  • Fig. 6 depicts the structure of Template 6, showing coordination with a tetradenate coordination sphere metal ion, resulting in an N ⁇ metal ion bond Ri - iii - Iii - Ccc - Jjj - Kkk - R 2 Template 7
  • Preferred ammo acids includes Ala, Gly, Nle, Val Leu, lie, His, Lys, or Arg, and derivatives, analogs or homologs thereof, including both natural and synthetic ammo acids
  • JJJ is an L- or D-configuration ammo acid with an aromatic side chain
  • Preferred am o acids include D-configuration Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-n ⁇ tro), Phe(4'-methyl), Phe(4'- Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl), or Tyr(BzlCI 2 ), and derivatives, analogs or homologs thereof
  • the aromatic ring in JJJ may be functional
  • Preferred ammo acids include L-configuration Lys, Arg, Orn, Dpr or Dbu, and derivatives, analogs or homologs thereof, including both natural and synthetic am o acids Aaa does not provide an N for metal ion complexation
  • Fig. 7 depicts the structure of Template 7, showing coordination with a tetradenate coordination sphere metal ion, resulting in an N 3 S ⁇ metal ion bond
  • the foregoing templates may be employed with tetradentate coordination sphere metal ions, such as various forms of technetium and rhenium
  • Corresponding templates may be constructed for use with metal ions of other coordination spheres
  • Representative Peptides of this Invention Representative peptides of this invention were made using library and synthesis methods described herein, and selected peptides were tested using a Where Kkk is an L- or D-configuration cationic ammo acid with a positively charged side chain Preferred ammo acids include L-configuration Lys, Arg, Orn, Dpr or Dbu, and derivatives, analogs or homologs thereof, including both natural and synthetic ammo acids Aaa does not provide an N for metal ion complexation
  • Fig. 7 depicts the structure of Template 7, showing coordination with a tetradenate coordination sphere metal ion, resulting in an N 3 Si metal ion bond
  • the foregoing templates may be employed with tetradentate coordination sphere metal ions, such as various forms of technetium and rhenium
  • Corresponding templates may be constructed for use with metal ions of other coordination spheres
  • Representative Peptides of this Invention Representative peptides of this invention were made using library and synthesis methods described herein, and selected peptides were tested using a binding assay Table 1 sets forth peptides of this invention, and the results of competitive inhibition binding assays The peptides were synthesized using conventional peptide synthesis methods, and were complexed with rhenium using the methods described herein The competitive inhibition binding assay was conducted using membranes prepared from hMC4-R and B-16 mouse melanoma cells (containing MC1-R) using 0 4 nM 125 l-NDP-alpha-MSH (New England Nuclear, Boston, MA, USA) in 50 mM HEPES buffer containing 1 mM MgCI 2 , 2 mM CaCI 2 ,
  • a cAMP assay was also performed Human MC4-R or B-16 cells were grown to confluence in 96 well plates (plating approximately 250,000 cells per well) Identical sets of cells in triplicate were treated with 0 2 mM isobutylmethylxanthine (IBMX) and the chosen concentration of the rhenium metal ion-complexed peptide and the rhenium metal ion- complexed peptide in the presence of 20 nM alpha-MSH Cells similarly treated but with only 20 nM alpha-MSH served as positive control A buffer blank, as a negative control, was also included Incubation was for one hour at 37°C after which the medium was aspirated and the cells extarted with 150 microliters of HCI Total cAMP accumulated in 100 microliters of this solution was quantitated using a commercially available low pH cAMP assay kit (R&D Systems) by the procedure specified by the kit supplier The table shows the amount of
  • metallopeptides of this invention that are MC1-R specific can be used, when complexed to 99 Tc as a radiodiagnostic agent, for imaging melanoma tumor metastases, and when complexed to rhenium-188 ( 188 Re), rhenium-186 ( 186 Re) or other therapeutic radionuclides as a radiotherapeutic agent for treatment of melanoma tumors and metastatic tumors.
  • melanoma has a complex antigenic profile. It is generally believed that malignant melanoma is derived by UV activity from DOPA positive melanocytes, the melanin (skin pigment) producing units. Primary diagnosis involves electron microscopic examination to reveal the presence or absence of pre-melanosomes. Melanotic melanoma is classified as dendritic, spindle, playful, large epitheloid, small nevus and so on. Amelanotic melanoma, on the other hand, is frequently misdiagnosed because the histology of these cells resembles that of malignant iymphoma, carcinoma or sarcoma. Therefore, morphological evaluation may not prove reliable for clinical diagnosis.
  • the product can be formulated as a single-vial, lyophilized radiolabehng kit containing the peptide in an uncomplexed state, buffer, and a reducing agent for pertechnetate To induce radiolabehng, resulting in a metallopeptide, the vial is incubated after the addition of sodium pertechnetate
  • a 5-10 ⁇ g sample of the peptide taken in 0 001 N aq HCI is mixed with 1-30 mCi of generator-eluted Na 99m Tc0 4 in a 5 ml serum vial
  • the volume of the resulting mixture is adjusted to 600 ⁇ l using mjectable saline
  • a 400 ⁇ l volume of freshly prepared and nitrogen-purged phthalate-tartrate-Sn(ll) buffer (40 10 1 mM) is added to the vial under a nitrogen head space
  • the vial is immediately sealed and placed in a shielded boiling water bath After 15 minutes the vial is removed from the water bath and allowed to come to room temperature
  • the radiochemical purity, as calculated from HPLC profiles, ranges from 90-99%
  • the peptides of this invention may alternatively be labeled with 99m Tc by other means, including use of stannous-tartrate-succinate buffer, stannous-EDTA-succmate buffer, stannous stabilized in gluco
  • the metallopeptides of this invention may be delivered to a subject by any means known in the art This includes intravenous injection, subcutaneous injection, administration through mucous membranes, oral administration, dermal administration, regional administration to an organ, cavity or region, and the like
  • Imaging may be any means known in the art, including gamma camera and SPECT imaging Imaging may commence immediately after administration, and may include time course radiographic studies, and imaging may continue so long as images may be obtained
  • the MC1-R specific metallopeptides of this invention may be used as melanoma specific tumor imaging and staging agent These uses include early detection and localization of primary and disseminated lesions, identification of lymph nodes containing lesions, radioimmunoguided surgery applications and the like Tumor imaging using a 99m Tc-labeled metallopeptide of this invention selective for the MC1-R will further help in formulating the optimal clinical treatment modality, whether surgical, radiation or chemotherapeutic
  • metallopeptides of this invention that are MC1-R specific can be used as chemoprevention agents against sun-induced, such as by UV radiation, neoplastic activity in human skin MC1-R agonist metallopeptides of this invention may be employed to stimulate epidermal melanocytes to produce melanin as well as to convert pheomelanin to eumelanin Eumelanin, which is dark brown or black pigmentation, is considered more photo- protective than pheomelanin, which is yellow or red pigmentation
  • the dark pigment eumelanin a brown/black pigment incorporating dopa-based structural units, is the mam photoprotective agent in skin
  • Lighter colored people have higher levels of pheomelanin, a red/yellow pigment having predominantly cysteine and related sulfur-based structural units, which is an inefficient UV absorber
  • the process of melanogenesis is believed to involve stimulation of MC1-R in epidermal melanocytes, thereby mediating the stimulation of tyrosmase enzymes within these pigment cells, inducing the conversion of tyrosine to dopa and then through dopaqumone to eumelanin Sun tanning due to direct sun exposure is also proposed to result from the same pathway by local production of melanotropic peptide from a POMC gene in the epidermis
  • stimulation of eumelanin production and conversion of pheomelanin to eumelanin may be a desirable chemo
  • a potent, high-affinity and highly selective MC1-R agonist metallopeptide of this invention can accordingly be used as a therapeutic chemoprevention agent for combating harmful sun, or UV, exposure that induces neoplastic activity in skin melanocytes
  • MC4-R agonists can be used as a therapeutic agent to modify energy metabolism and feeding behavior, including treatment of pathologic obesity and related conditions
  • Metallopeptides of this invention that are MC4-R antagonists can also be used as a therapeutic agent in eating disorders, such as treatment of anorexia Control centeis for eating and satiety reside in the hypothalamus These responses are determined by diverse hormones and soluble factors that signal through specific receptors in the hypothalamus MC4-R is known to be expressed in the brain, and mactivation of this receptor by gene targeting has resulted in mice with the maturity-onset obesity syndrome that is associated with hyperphagia, hype ⁇ nsuhnemia and hyperglycemia
  • metallopeptides of this invention may used as therapeutic agents for treatment of sexual dysfunction, including treatment of both male erectile dysfunction and female sexual dysfunction
  • metallopeptides of this invention may be used as therapeutic agents for treatment of inflammation, including specifically MC1-R and MC3-R agonist
  • the library design was based on the tetrapeptide message sequence, His-Phe-Arg-Trp (6-9 sequence), of ⁇ -MSH. This sequence exists as a reverse turn, making it suitable for conversion into a metallopeptide format of this invention.
  • metallopeptides were designed around a tripeptide N 3 S ⁇ MBD designed for a rhenium metal ion.
  • the MBD was derivatized to yield the pentapeptide Ac-His-Phe-Arg-Cys-Trp-NH 2 as a putative candidate for meianocortin ("MC") receptors.
  • the template structure was used to define a small combinatorial library utilizing split synthesis methodologies.
  • the final template selected for the combinatorial library was Ac-D-His-Xaa-D-Cys- Trp-NH 2 , where Xaa was D-(2') Naphthylalanine, D-Trp, D-HomoPhe, or D-Phenylglycine.
  • the peptide resin, Cys(S'Bu)-Trp(Boc)-Resin was split in four equal parts. Each part was reacted with one of the four Xaa types. After coupling, the resin pools were mixed and synthesis continued in a single pool to couple the His residue. The final result was four separate peptides in a single pool, each peptide varying by one amino acid, in the Xaa position.
  • An S l Bu OSPG group was used to protect the SH group during synthesis.
  • the S'Bu group was split using tributylphosphine.
  • the resulting free SH-containing peptide-resin was treated with the rhenium transfer agent Re(0)CI 3 (PPh 3 ) 2 in the presence of 1 ,8-Diazabicyclo[5,4,0] undec-7-ene as base.
  • the resulting metallopeptide resin was then treated with TFA to cleave it from the resin and de-protect all the side chain protecting groups. The products were analyzed by mass spectrometry.
  • the library was rationally designed based upon data relating to meianocortin receptors and peptide sequences specific to the meianocortin receptors, including melanotropin side-chain pharmacophores, D-Phe 7 and Trp 9 , that interact with a hydrophobic network of receptor aromatic residues in transmembrane regions 4, 5, 6, and 7. Based on this design criterions, a pharmacophore for the meianocortin receptor was preliminarily defined, and a combinatorial library designed for identification of potent and receptor-selective agonists.
  • the putative structure R-Aaa-Baa-L-Cys-Caa-NH 2 was selected, in which each of Aaa, Baa and Caa are selected from L- or D-isomers of 2-Nal (1 ), Phe (2), Trp (3), Tyr (4) and Ala (5), so that any one of the foregoing can be substituted for any one of Aaa, Baa or Caa.
  • the five amino acids were designated 1 through 5, with the isomerism conventionally notated, so that, for example, Baa 2 L refers to L-Phe in the Baa position.
  • the terminal R group represents a truncated amino acid, and offers additional structural diversity.
  • a pool and split library synthesis scheme was employed such that 5,000 separate compounds were synthesized, resulting in 200 final pools each containing 25 different compounds, with the compounds differing solely by the amino acids in the Aaa and Baa position.
  • binding characteristics relating to the Caa amino acid or R terminal group can be identified through inter-group comparison, thereby simplifying the deconvolution strategy.
  • the library synthesis steps are set forth in Fig. 8.
  • the resin of step 1 was divided into 10 groups.
  • each of Caa ⁇ through Caa 5 D were coupled to an individual resin group, and L-Cys was coupled to each resin group, resulting in 10 groups and 20 couplings.
  • Each of the resin groups of step 2 was then divided into 10 sub-groups as shown at step 3 (with only one subgroup illustrated at step 3, and for each subgroup of step 3, each of BaaiL through Baa 5 D were coupled to one group within the subgroup, resulting in 100 groups in 10 subgroups and 100 couplings.
  • step 3 For each subgroup of step 3, the five Baa x L members and the five Baa x D members were separately pooled in step 4, resulting in 20 subgroups, with each subgroup containing five different sequences differing by the Baa x member.
  • step 4 Each of the 20 subgroups of step 4 were then in step 5 divided into 10 groups (with only one shown for illustration purposes in Fig. 8), and for each subgroup, each of Aaa ⁇ through Aaa 5 D were coupled to one group within the subgroup, resulting in 200 groups in 20 subgroups and 200 couplings.
  • step 5 For each subgroup of step 5, the five Aaa x L members and the five Aaa x D members were separately pooled in step 6, resulting in 40 subgroups, with each subgroup containing twenty-five different sequences differing by the Baa x and Aaa x member.
  • step 7 each of the 40 subgroups of step 6 were divided into five groups, and each of R, through R 5 were coupled to one group within the subgroup, resulting in 200 groups in 40 subgroups, with each group containing 25 different sequences differing by the Baa x and Aaa x member.
  • Peptides were synthesized using Fmoc chemistry, with side chain functionalities protected using acid labile groups.
  • the SH group of the Cys residue was protected by a S'Bu OSPG cleavable in presence of both base and acid labile groups using tributylphosphine as the reducing agent.
  • the peptide chain was assembled on the solid phase using 1-(1 H-benzotriazole-1-yl)-1 ,1 ,3,3,-tetra- methyluronium tetrafluoroborate (TBTU) as a coupling agent.
  • TBTU 1-(1 H-benzotriazole-1-yl)-1 ,1 ,3,3,-tetra- methyluronium tetrafluoroborate
  • the SH group was then selectively unprotected and rhenium metal ion complexed using the rhenium transfer agent Re(0)CI 3 (PPh 3 ) 2 in the presence of 1 ,8-D ⁇ azab ⁇ cyclo[5,4,0]undec-7-ene (DBU) as base.
  • DBU rhenium transfer agent
  • the metal-peptide complex was formed with the peptide chain still tethered to the solid support.
  • the metallopeptide was then liberated from the solid support by treatment with TFA.
  • This solid phase approach to metal ion complexation is fully compatible with split synthesis methodologies employed in combinatorial libraries.
  • the synthesis process was performed using commercial automated synthesizers. Multiple manual synthesizers (such as those commercially available from SynPep Corporation, Dublin, CA) allow parallel synthesis of ten peptides simultaneously.
  • Quality control protocols were employed as required, and include HPLC, mass spectral analysis, and ammo acid analysis on each individual pool of 25 compounds. The presence of each of pool constituent is established by molecular ion mass spectral analysis. Negative ion mode electron spray (ES) and matrix-assisted laser desorption (MALDI) techniques were employed.
  • ES electrospray
  • MALDI matrix-assisted laser desorption
  • Rhenium thus acts as an internal mass spectral reference for these metallopeptides.
  • a spectral analysis of one such pool of 25 compounds synthesized by the methods of this claim is shown at Fig. 9. Five sets of two metallopeptides in this pool have similar masses due to the presence of the same am o acids assembled in different sequences. The relative intensities of the peaks is due to differential lonization of individual compounds in the pool and does not reflect the relative amounts in the mixture.
  • Metallopeptide library pools are screened for MC4-R receptor and MC1-R receptor binding activity in high throughput screening assays.
  • the MC receptor-b dmg assay uses membrane preparations from B16-F1 or B16-F10 melanoma cells as the source of MC receptor.
  • Cell membranes prepared from MC4-R-express ⁇ ng 293 cells and negative control, untransfected 293 cells, are substituted for B16-F1 or B16-F10 melanoma cell membranes in MC4-R specific binding assays.
  • the MC receptor-b dmg assays use the Mil pore Multi-Screen System and are performed in 96-well Millipore filter plates (Durapore, 0.45 mm porosity) pre-blocked with 0.5% bovine serum albumin in phosphate buffered saline. Cell membrane preparations (12.5 ⁇ g/well) are incubated with 0.4 nM 125 I-NDP-MSH in HEPES Buffer containing 0.2% bovine serum albumin. Non-specific binding is determined by addition of l O ⁇ M ⁇ -MSH or 10 "7 M NDP-MSH. Metallopeptides to be tested are added to reaction wells at a final concentration of 1 mM.
  • the binding reaction is rapidly terminated by filtration to capture the membranes. Filters are washed 3 times with ice-cold PBS and air-dried. Individual filters are then punched from the plates and distributed into gamma counter tubes. Radioactivity associated with the membranes is determined in a Packard Cobra gamma counter. Specific binding is determined as the radioactivity in wells containing 125 I-NDP-MSH alone minus the radioactivity in wells containing lO ⁇ M ⁇ -MSH. Test compounds are screened in duplicate wells and are considered to be active where 1 ⁇ M concentrations inhibit >50% of the specific binding. Standard curves of unlabeled NDP-MSH will be included on each plate as an internal assay control.
  • cAMP kit R&D Systems, DE0350, low pH
  • 293 cells stably transfected with hMC-4 receptor, or B16-F1 melanoma cells are grown to confluence in 96-well dishes. Ceils are washed and fresh RPM I containing 0.2 mM isobutylmethylxanthine (cAMP phosphodiesterase) and varying concentrations of metallopeptides, or ⁇ -MSH as a positive control, are added, and the cells are incubated for 1 hour at 37°C.
  • cAMP phosphodiesterase isobutylmethylxanthine
  • Example 4 DECONVOLUTION OF MELANOCORTIN RECEPTOR-SPECIFIC LIBRARY Deconvolution of a positive pool is done by iterative re-synthesis and screening deconvolution approaches.
  • the individual 25 constituents are synthesized separately, or alternatively in 5 smaller pools of 5 compounds each, with each pool screened in receptor binding assays. The latter approach is preferred where there is a high hit frequency in the preliminary screen.
  • the compounds in pools with the best results are individually synthesized and screened.
  • an alternative method of mass spectral deconvolution of metallopeptide libraries is employed.
  • the method is based on the internal signature of rhenium-complexed peptides (two isotopic peaks in 1 :2 ratios differing by 2 mass units), which generally permits metallopeptide identification even in mixed solutions.
  • a positive pool is incubated with receptor-bearing cells, the excess unbound compounds washed away under controlled conditions, and the cells treated with a solvent to disrupt metallopeptide binding and extract the metallopeptide in the solvent.
  • Example 2 A synthesis procedure similar to that described in Example 1 was used in making this library.
  • a NovaSyn TGR resin for making peptide amides (substitution 0.2 mM/gm) was used.
  • Fmoc synthetic strategy was employed using the following protected amino acids: Fmoc-Trp(Boc), Fmoc-Cys(S'Bu), Fmoc-Xxx, and Fmoc-His(Trityl).
  • the Xaa amino acids were Trp, HomoPhe, 2'-Naphthylalanine, and Phenylglycine.
  • the peptide resin Cys(S l Bu)-Trp-NH 2 was split into four equal pools and one of the Xaa amino acids was coupled to one individual pool. After completion of the coupling reaction, the four resin pools were mixed again. The synthesis proceeded with the coupling of His followed by acetylation of the N-terminus. After the complete assembly of the peptide chain Ac-His(Trt)-Xaa- Cys(S l Bu)-Trp(Boc)-NH 2 , the S'Bu group was removed by treatment with DMF/tributyiphosphine and rhenium-oxo metal ion was complexed as generally described above.
  • the fully protected metallopeptide was deblocked and liberated from the solid support by treatment with a cleavage cocktail (95:5 mixture of trifluoroacetic acid - triisopropylsilane) for three hours.
  • the metallopeptide library was recovered by precipitation using cold ether. The resulting pellet was washed twice and 0.5 ml of 95% acetic acid was added. After one-half hour 5 ml of water was added and the solution was freeze-dried yielding the desired library in solid form.
  • Mass spectrometric analysis of the library pool confirmed the correct masses for all four members of the library:
  • High potency metallopeptides are also provided with N-termmal modifications
  • Systematic N- terminal modifications are made based upon the limited data available in the literature related to receptor-bmdmg affinities of peptide analogs for various MC receptor types
  • these studies indicate that the H ⁇ s6 residue may be a critical factor in determining receptor selectivity for MC1-R (peripheral) versus MC4-R (brain)
  • Three-dimensional molecular models of the human meianocortin receptor have been developed based upon the electron cryo-microscopic structure of bactenorhodopsin and the electron density footprint of bovine rhodopsm By modeling known potent agonists into the proposed binding sites, specific ligand-receptor interactions have been identified.
  • R is a pair consisting of a hydrophobic side chain and hydrophilc side chain with hydrogen bonding potential which is selected from the following groups
  • n is from 2 to 9 and X and/or Y are selected from H, OH, CI, Br, I, NH 2 , OCH 3 , N0 2 and similar groups.
  • Example 8 SKIN DARKENING IN ANOLIS CAROLINENSIS PT-1145 complexed with rhenium (0.65 mg taken in a 50 mL vehicle) was injected intraperitoneally in a lizard (Anolis carolinensis) that was pre-conditioned for a skin darkening experiment.
  • the pre-conditioning involved leaving the lizards in a well-lit white background for 24 hours.
  • the skin coat color turned from bright green to dark brown to black.
  • the skin coat color remained dark during the five-hour observation period.
  • Lizards injected with the vehicle alone PBS buffer containing 1 % each of DMF and beta-cyclodextran

Abstract

Metallopeptides and metallopeptide combinatorial libraries specific for melanocortin receptors are provided, for use in biological, pharmaceutical and related applications. The metallopeptides and combinatorial libraries are made of peptides, peptidomimetics and peptide-like constructs, in which the peptide, peptidomimetic or construct is conformationally fixed on complexation of a metal ion-binding portion thereof with a metal ion.

Description

MELANOCORTIN METALLOPEPTIDE CONSTRUCTS, COMBINATORIAL LIBRARIES AND APPLICATIONS
CROSS-REFERENCE TO RELATED APPLICATIONS
This application claims the benefit of the filing of U.S. Provisional Patent Application Serial No. 60/148,994, entitled Meianocortin Receptor-Specific Metallopeptide Constructs, Combinatorial Libraries and Applications, filed on August 13, 1999, and the specifications thereof is incorporated herein by reference. This application is related to International Patent Application Serial No. PCT/US99/29743, entitled Metallopeptide Combinatorial Libraries and Applications, filed December 14, 1999, U.S. Patent No. 6,027,711 , entitled Structurally Determined Metallo-Constructs and Applications, issued February 22, 2000, and U.S. Patent No. 5,891 ,418, entitled Peptide - Metal Ion Pharmaceutical Constructs and Applications, issued April 6, 1999, the teachings of all of which are incorporated herein by reference as if set forth in full.
GOVERNMENT RIGHTS
The U.S. Government has a paid-up license in this invention and the right in limited circumstances to require the patent owner to license others on reasonable terms as provided for by the terms of Grant No. R43 CA83417 awarded by the National Cancer Institute of the National Institutes of Health of the Department of Health and Human Services and Grant No. R43 DK55470 awarded by the National Institute of Diabetes and Digestive and Kidney Diseases of the National Institutes of Health of the Department of Health and Human Services.
BACKGROUND OF THE INVENTION
Field of the Invention (Technical Field): The present invention relates to metallopeptides, metal ion-complexed peptidomimetics, and metallo-constructs, including metallopeptide combinatorial libraries, metal ion-complexed peptidomimetic and peptide-like combinatorial libraries and metallo-construct combinatorial libraries, specific for meianocortin receptors, including methods for the use and making of the same. The invention also relates to methods for synthesizing and assembling such libraries, and methods for identification and characterization of library constituents which are capable of binding a meianocortin receptor of interest, or mediating a meianocortin receptor-related biological activity of interest.
Background Art:
Note that the following discussion refers to a number of publications by author(s) and year of publication, and that due to recent publication dates certain publications are not to be considered as prior art vis-a-vis the present invention. Discussion of such publications herein is given for more complete background and is not to be construed as an admission that such publications are prior art for patentability determination purposes.
Meianocortin Receptors. A family of meianocortin receptor types and subtypes have been identified, including melanocortin-1 receptors (MC1-R) expressed on normal human melanocytes and melanoma cells, melanocortin-2 receptors (MC2-R) for ACTH (adrenocorticotropin) expressed in cells of the adrenal gland, melanocortin-3 and melanocortin-4 receptors (MC3-R and MC4-R) expressed primarily in cells in the hypothalamus, mid-brain and brainstem, and melanocortin-5 receptors (MC5-R), expressed in a wide distribution of peripheral tissues.
Peptides specific for meianocortin receptors have been reported to have a wide variety of biological activities, including effects upon pigmentation and steroidogenesis, known to be mediated by MSH (melanocyte stimulating hormone) and ACTH receptors. Several studies have documented the presence of melanotropin receptors on primary human melanoma cells (Tatro JB, Atkins M, Mier JW, et al. Melanotropin receptors demonstrated in situ in human melanoma. J Clin Invest, 85:1825-1832, 1990). Melanotropin receptors have been reported as markers for melanotic and amelanotic human melanoma tumors (Sharma SD, Granberry ME, Jiang J, et al. Multivalent melanotropic peptide and fluorescent macromolecular conjugates: new reagents for characterization of melanotropin receptors. Bioconjug Chem 5:591-601 , 1994; Sharma SD, Jiang J, Hadley ME, et al. Melanotropic peptide- conjugated beads for microscopic visualization and characterization of melanoma melanotropin receptors. Proc Natl Acad Sci U S A 93(24):13715-13720, 1996). In particular, the presence of MC1-R has been demonstrated in human melanoma cells by an antibody to MC1-R (Xia Y, Skoog V, Muceniece R, et al. Polyclonal antibodies against human meianocortin MC-1 receptor: Preliminary immunohistochemical localization of meianocortin MC1 receptor to malignant melanoma cells. European J Pharmacol 288:277-283, 1995). MC1-R is a G protein-coupled, 7-transmembrane receptor expressed in skin-cell melanocytes and shares some degree of homology with related receptors MC2-R, MC3-R, MC4-R and MC5-R. Each of these receptors can bind various peptide analogs that contain a common melanotropic pharmacophore, His-Phe-Arg-Trp, which describes the 6-9 sequence of the alpha- melanocyte stimulating hormone (α-MSH).
Prior to molecular characterization of the MC receptors, α-MSH analogs were labeled with the radioisotope lndium-111 and used in melanoma imaging studies (Wraight EP, Bard DR, Maughan TS, et al. The use of a chelating derivative of alpha melanocyte stimulating hormone for the clinical imaging of malignant melanoma. Brit J Radiology 65: 112-118, 1992; Bard DR, Knight CG and Page-Thomas DP. A chelating derivative of alpha-melanocyte stimulating hormone as a potential imaging agent for malignant melanoma. Brit J Cancer 62:919-922, 1990; Bard DR, Knight CG, Page-Thomas DP. Targeting of a chelating derivative of a short chain analogue of alpha-melanocyte stimulating hormone to Cloudman S91 melanomas. Biochem Soc Trans 18:882-883, 1990). Linear and cyclic disulfide-containing peptides have been identified and used for melanoma imaging and appear to be non-selective among MC receptors (Chen J and Quinn TP. Alpha melanocyte stimulating hormone analogues Tc-99m/Re-188 labeling and their pharmacokinetics in malignant melanoma bearing mice. J Nucl Med 39: 222p, 1998; Giblin MF, Wang N, Hoffman TJ, et al. Design and characterization of alpha-melanotropin peptide analogs cyclized through rhenium and technetium metal coordination. Proc Natl Acad Sci U S A 95(22): 12814-12818, 1998). In later studies, the cyclic peptide reported by Giblin and coworkers was also found to localize in the brain (Wang NN, Giblin MF, Hoffman TJ, et al. In vivo characterization of Tc- 99m and Re-188 labeled cyclic melanotropin peptide analogues in a murine melanoma model. J Nucl Med 39: 77p, 1998 and corresponding poster presentation at the 45th Society of Nuclear Medicine
Meeting, Toronto, June 1998). It has been recently reported that the response of human melanocytes to UV radiation is mediated by α-MSH induced activation of the cAMP pathway through the MC1-R (Im S, Moro O, Peng F, et al. Activation of the cyclic AMP pathway by alpha-melanotropin mediates the response of human melanocytes to ultraviolet B radiation. Cancer Res 58: 47-54, 1998). MC4-R is also a G protein-coupled, 7-transmembrane receptor, but is believed to be expressed primarily in the brain. Inactivation of this receptor by gene targeting has been reported to result in mice with the maturity-onset obesity syndrome that is associated with hyperphagia, hyperinsulinemia, and hyperglycemia (Huszar D, Lynch CA, Fairchild-Huntress V, et al. Targeted disruption of the melanocortin-4 receptor results in obesity in mice. Cell 88:131-141 , 1997). MC4-R is a molecular target for therapeutic intervention in energy homeostasis.
Alpha-MSH has been described as a potent anti-inflammatory agent in all major forms of inflammation (Star RA, Rajora N, Huang J, Stock RC, Catania A, and Lipton JM: Evidence of autocrine modulation of macrophage nitric oxide synthase by alpha-melanocyte stimulating hormone. Proc Natl Acad Sci U S A 92:8016-8020, 1995; Getting SJ, and Perretti M: MC3-R as a novel target for antiinflammatory therapy. Drug News and Perspectives 13:19-27, 2000). Implication of both MC1-R and MC3-R receptors in anti-inflammatory processes has been stressed. In particular, the activation of these MC receptors by meianocortin receptor agonists has been reported to inhibit the expression of nitric oxide synthase and subsequent nitric oxide production.
Significant work has been done in determining the structure of meianocortin receptors, including both the nucleic acid sequences encoding for the receptors and the amino acid sequences constituting the receptors. See, for example, International Patent Applications No. PCT/US98/12098 and PCT/US99/16862 and U.S. Patent No. 5,994,087. A large number of ligands specific for meianocortin receptors, both agonists and antagonists, have also been developed. See, for example, International Patent Applications No. PCT/US98/03298 (iodo group-containing meianocortin receptor-specific linear peptide), PCT/GB99/01388 (MC1 -R specific linear peptides), PCT/GB99/01195 (MC3-R, MC4-R and MC5-R specific cyclic peptides), PCT/US99/04111 (MC1-R specific peptide antagonists for melanoma therapy), PCT/US99/09216 (isoquinoline compounds as meianocortin receptor ligands), PCT/US99/13252 (spiropiperdine derivatives as meianocortin receptor agonists), and U.S. Patent No. 6,054,556 (cyclic lactam peptides as MC1-R, MC3-R, MC4-R and MC5-R antagonists). In addition, a large number of patents teach various methods of screening and determining meianocortin receptor- specific compounds, as for example International Patent Applications No. PCT/US97/15565, PCT/US98/12098 and PCT/US99/16862 and U.S. Patents No. 5,932,779 and 5,994,087. In general, compounds specific for MC1-R are believed to be useful for treatment of melanoma, including use as radiotherapeutic or drug delivery agent, and as diagnostic imaging agents, particularly when labeled with a diagnostic radionuclide. Compounds specific for MC3-R, MC4-R or MC5-R are believed to be useful in regulation of energy homeostasis, including use as agents for attenuating food intake and body weight gain, for use in treatment of anorexia, as a weight gain aid, for treatment of obesity, and other treatment of other food intake and metabolism-related purposes. Compounds specific for MC3-R and MC4-R, among other meianocortin receptors, can be used as agents for treatment of sexual dysfunction, including male erectile dysfunction. Compounds specific for MC3-R and MC4-R, among other meianocortin receptors, can be used to regulate blood pressure, heart rate and other neurophysiologic parameters. Other meianocortin receptor peptides can be used as tanning agents, to increase melanin production, such as peptides that are MCR-1 agonists. Compounds specific for MCR-1 and MCR-3 may be useful in regulation of inflammatory processes.
There remains a significant need for ligands with high specificity for discrete meianocortin receptors, as well as ligands or compounds that are either agonists or antagonists of specific meianocortin receptors. High affinity peptide ligands of meianocortin receptors can be used to exploit varied physiological responses associated with the meianocortin receptors, either as agonists or antagonists. In addition, meianocortin receptors have an effect on the activity of various cytokines, and high affinity peptide ligands of meianocortin receptors can be used to regulate cytokine activity.
Peptide Libraries and Combinatorial Chemistry. Libraries of peptides and other small molecules, with enormous pool of structurally diverse molecules, are well suited for pharmaceutical lead generation and lead optimization. Libraries of a variety of molecular species have been described in literature and screened for drug discovery, including peptides, peptoids, peptidomimetics, oligonucleotides, benzodiazepines, and other libraries of small organic molecules. Various approaches have been used to construct libraries of structurally diverse chemical compounds, include chemical synthesis and genetic engineering methods. Chemically synthesized libraries have been synthesized by general solution chemical means and by solid-phase methods. The prior art on designing, synthesizing, screening, and evaluation of peptide-based libraries has been reviewed in numerous articles.
Spatially Addressable Parallel Synthesis of Solid Phase Bound Libraries. Various strategies for chemical construction of a library of peptides or other small molecules are well established. One strategy involves spatially separate synthesis of compounds in parallel on solid phase or on a solid surface in a predetermined fashion so that the location of one compound or a subset of compounds on the solid surface is known. Other methods, such as light-directed spatially addressable parallel chemical synthesis techniques, based upon use of photolithographic techniques in peptide synthesis on a solid surface, such as a borosilicate glass microscope slide, provide libraries containing more than 100,000 spatially separated compounds. However, synthesis of libraries that are structurally more diverse than simple peptides requires the development of orthogonal photolabile protecting groups that can be cleaved at different wavelengths of light. In addition, the solid surface bearing these libraries also has been reported to cause a pronounced effect on binding affinities in library screening assays. Pooling and Split Synthesis Strategies. Large libraries of compounds can be assembled by a pooling strategy that employs equimolar mixtures of reactants in each synthetic step or by adjusting the relative concentration of various reactants in the mixture according to their reactivities in each of the coupling reactions. In one approach equimolar mixtures of compounds are obtained by splitting the resin in equal portions, each of which is separately reacted with each of the various monomeric reagents. The resin is mixed, processed for the next coupling, and again split into equal portions for separate reaction with individual reagents. The process is repeated as required to obtain a library of desired oligomeric length and size. This approach is the basis of the "one-bead one-peptide" strategy which employs amino acid sequencing to ascertain the primary structure of the peptide on a hit bead in a bioassay. Automated systems have been developed for carrying out split synthesis of these libraries with rather more efficiency. A common artifact occasionally seen with all these resin bound libraries is altered target-specific affinity by some solid phase bound compounds in bioassays, which can result in totally misleading results.
Another strategy involves construction of soluble libraries. This strategy involves a deconvolution process of iterative re-synthesis and bioassaying until all the initially randomized amino acid positions are defined. Several modifications to this strategy have been developed, including co-synthesis of two libraries containing orthogonal pools, which eliminates the need of iterative re-synthesis and evaluation. A major limitation of the soluble library approach is its applicability to high affinity systems. The abundance of each compound in solution can be influenced by the total number of compounds in a library that can affect the biological activity. For this reason, a highly active compound in any pool may not in fact be the most potent molecule. Lack of reasonable solubilities of certain members in a library may further influence this phenomenon.
Among the various classes of libraries of small molecules, peptide libraries remain the most versatile because of the structural diversity offered by the use of naturally occurring amino acids, incorporation of a variety of "designer" amino acids, and the high efficiency and ease with which peptide synthesis can be accomplished. In addition, another level of structural diversity in peptide-based libraries has been added by post-synthesis modification of the libraries. These modifications include permethylation, acylation, functionalization of the side chain functionality, and reductive amination of the N-terminus. SUMMARY OF THE INVENTION (DISCLOSURE OF THE INVENTION)
In one preferred embodiment, the invention provides a construct comprising a metal ion-binding domain comprising two or more linked residues forming an N3S! ligand available for complexing with a metal ion, wherein the construct is conformationally constrained in a structure specific for one or more meianocortin receptors upon complexing the metal ion-binding domain with a metal ion. In another preferred embodiment, the invention provides a manufactured peptide and pharmaceutically acceptable salts thereof comprising a metal ion-binding domain comprising two or more contiguous amino acids and a determined biological-function domain specific for one or more meianocortin receptors, wherein at least a portion of said biological-function domain is co-extensive with at least a portion of the metal ion-binding domain, and wherein said biological-function domain is conformationally constrained upon complexing the metal ion-binding domain with a metal ion.
In another preferred embodiment, the invention provides a combinatorial library targeted to meianocortin receptors of different sequence peptide members synthesized on solid phase, where each constituent library member comprises:
(a) a peptide sequence of three or more amino acid residues bound to solid phase characterized by (i) a sequence of two or more amino acid residues forming a metal ion-binding domain and including at least one amino acid residue containing at least one S wherein the said S is protected by an orthogonal S-protecting group, (ii) a sequence of one or more amino acid residues at the N- or C- terminus of the metal ion-binding domain, or at both the N- and C-terminus of the metal ion-binding domain, and (iii) a cleavable bond attaching the peptide sequence to solid phase; and
(b) a unique selection or sequence of amino acid residues in the peptide sequence of at least one of the constituent members of the library; wherein the orthogonal S-protecting group may be removed without cleaving the peptide sequence from the solid phase.
In another preferred embodiment, the invention provides a combinatorial library targeted to meianocortin receptors of different sequence peptidomimetic members synthesized on solid phase, where each constituent library member comprises:
(a) a peptidomimetic sequence of a combination of three or more amino acid residues and mimics of amino acid residues bound to solid phase characterized by (i) a sequence of two or more amino acid residues, mimics of amino acid residues or combinations thereof forming a metal ion-binding domain and including at least one amino acid residue or mimic of an amino acid residue containing at least one S wherein the said S is protected by an orthogonal S-protecting group, (ii) a sequence of one or more amino acid residues, mimics of amino acid residues or combinations thereof at the N- or C- terminus of the metal ion-binding domain, or at both the N- and C-terminus of the metal ion-binding domain, and (iii) a cleavable bond attaching the peptidomimetic sequence to solid phase; and
(b) a unique selection or sequence of amino acid residues, mimics of amino acid residues or combinations thereof in the peptidomimetic sequence of at least one of the constituent members of the library; wherein the orthogonal S-protecting group may be removed without cleaving the peptidomimetic sequence from the solid phase.
In another preferred embodiment, the invention provides a combinatorial library targeted to meianocortin receptors of different sequence peptide or peptidomimetic members synthesized in solution, where each constituent library member comprises: (a) a peptidomimetic sequence of a combination of three or more amino acid residues and mimics of amino acid residues bound to solid phase characterized by (i) a sequence of two or more amino acid residues, mimics of amino acid residues or combinations thereof forming a metal ion-binding domain and including at least one amino acid residue or mimic of an amino acid residue containing at least one S wherein the said S is protected by an orthogonal S-protecting group, (ii) a sequence of one or more amino acid residues, mimics of amino acid residues or combinations thereof at the N- or C- terminus of the metal ion-binding domain, or at both the N- and C-terminus of the metal ion-binding domain; and
(b) a unique selection or sequence of amino acid residues, mimics of amino acid residues or combinations thereof in the peptidomimetic sequence of at least one of the constituent members of the library. The compositions of this invention include compositions of the formulas:
Ri - Lll - Aaa - Bbb - Ccc - R2,
Figure imgf000008_0001
R1 - Ddd - Bbb - Aaa - R3,
R4 - Eee - Bbb - Ccc - R2, Ri - Fff - Aaa - Ggg - Ccc - R5,
Ri - Hhh - Aaa - Bbb - Ccc - R5, and
Ri - Iii - Iii - Ccc - Jjj - Kkk - R2, wherein
Ri is any functionality that potentiates the intrinsic activity of the remainder of the molecule, including but not limited to providing an auxiliary or secondary receptor contact. Any of a variety of amino acids and non-peptide groups may be employed, including an amino acid chain from one to about four neutral or charged L- or D-configuration amino acid residues. If R-, is a non-peptide group, it may be a linear or branched alkyl, aryl, alkene, alkenyl or aralkyl chain;
Aaa is an L- or D-configuration cationic amino acid with a positively charged side chain. Preferred amino acids include L-configuration Lys, Arg, Orn, Dpr or Dbu, and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids. Aaa provides an N (nitrogen atom) for metal ion complexation;
Bbb is an L- or D-configuration amino acid with an aromatic side chain. Preferred amino acids include D-configuration Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nitro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl), or
Tyr(BzlCI2), and derivatives, analogs or homologs thereof. The aromatic ring in Bbb may be functionalized with halogen, alkyl or aryl groups. Bbb provides an N for metal ion complexation;
Ccc is an amino acid that provides both an N, from the alpha amino group, and an S (sulfur atom), from a side chain group, for metal ion complexation. Preferred amino acids include L- or D- configuration Cys, Pen and Hcys; Lll is a D-configuration ammo acid with an aromatic side chain Preferred ammo acids include D- configuration Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nιtro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl), or Tyr(BzlCI2), and derivatives, analogs or homologs thereof The aromatic ring in Lll may be functionalized with halogen, alkyl or aryl groups Lll does not provide an N for metal ion complexation,
R2 is an ammo acid with an aromatic side chain Preferred ammo acids include L- or D-configuration Phe, Trp, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nιtro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl) or Tyr(BzlCI2), and derivatives, analogs or homologs thereof, including both natural and synthetic ammo acids The
C-terminus may be free or amidated R2 may also be the corresponding des-carboxyl ammo acid of any of the foregoing Alternatively, R2 may be eliminated,
Ddd is an ammo acid that provides an S, from a side chain group, for metal ion complexation Preferred ammo acids include L- or D-configuration Cys, Pen and Hcys, R3 is an ammo acid with an aromatic side chain that provides an N for metal ion complexation Preferred ammo acids include L- or D-configuration Phe, Trp, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nιtro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl) or Tyr(BzlCI2), and derivatives, analogs or homologs thereof, including both natural and synthetic ammo acids The C-terminus may be free or amidated R3 may also be the corresponding des-carboxyl ammo acid of any of the foregoing,
R4 is a functionality that provides a cationic center Preferred ammo acids include L- or D- configuration Lys, Arg, Orn, Dpr or Dbu, and derivatives, analogs or homologs thereof, including both natural and synthetic ammo acids The N-termmus of the ammo acid may be functionalized with any of a variety of neutral ammo acid and non-peptide groups, including linear or branched alkyl, aryl, alkene, alkenyl or aralkyl chains,
Eee is an uncharged L- or D-configuration ammo acid that provides an N for metal ion complexation Preferred ammo acids include Gly and L-configuration Ala, Nle, Leu, Val, Phe or Trp, and derivatives, analogs or homologs thereof, including both natural and synthetic ammo acids In a preferred embodiment, Eee isn an ammo acid with an aliphatic side chain, Fff is an L- or D-configuration aromatic ammo acid Preferred ammo acids include D-configuration Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nιtro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl), Tyr(BzlCI2), Tic, Tiq or Tea, and derivatives, analogs or homologs thereof, including both natural and synthetic ammo acids The aromatic ring in Fff may be substituted with halogen, alkyl or aryl groups Fff does not provide an N for metal ion complexation,
Ggg is an L- or D-configuration aromatic ammo acid Preferred ammo acids include L-configuration Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nιtro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl) or Tyr(BzlCI2), and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids. The aromatic ring in Ggg may be substituted with halogen, alkyl or aryl groups. Ggg provides an N for metal ion complexation; R5 is preferably an amide, substituted amide, ester or carboxylate group. R5 may also be and L- or D- configuration amino acid or amino acid amide, including an aromatic, aliphatic, neutral or charged amino acid;
Hhh is an L- or D-configuration cationic amino acid with a positively charged side chain. Preferred amino acids include L-configuration Lys, Arg, Orn, Dpr or Dbu, and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids. Hhh does not provide an N for metal ion complexation;
Iii is an L- or D-configuration amino acid that provides an N for metal ion complexation. Preferred amino acids includes Ala, Gly, Nle, Val. Leu, lie, His, Lys, or Arg, and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids; Jjj is an L- or D-configuration amino acid with an aromatic side chain. Preferred amino acids include D- configuration Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nitro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl), or Tyr(BzlCI2), and derivatives, analogs or homologs thereof. The aromatic ring in Jjj may be functionalized with halogens, alkyl or aryl groups. Jjj does not provide an N for metal ion complexation; and
Kkk is an L- or D-configuration cationic amino acid with a positively charged side chain. Preferred amino acids include L-configuration Lys, Arg, Orn, Dpr or Dbu, and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids. Aaa does not provide an N for metal ion complexation. In the compositions of this invention, the metal ion-binding domain can be complexed with a metal ion, and such compositions are included within the invention. The invention further includes compositions wherein the composition is substantially more specific for one or more meianocortin receptors when the metal ion-binding domain is complexed with a metal ion than is the composition when the metal ion-binding amino acid sequence is not complexed with a metal ion. The combinatorial libraries of this invention include libraries wherein the metal ion-binding domain further comprises at least one N available for binding to a metal ion upon removal of the orthogonal S-protecting group. The combinatorial libraries include compositions wherein the metal ion- binding domain comprises three residues forming an N^ ligand.
In the combinatorial libraries, the orthogonal S-protecting group is S-thio-butyl, acetamidomethyl, 4-methoxytrityl, S-sulfonate or 3-nitro-2-pyr idinesulfenyl. The orthogonal S-protecting group may be removed from constituent library members thereof without otherwise altering the constituent library members or any amino acid side chain protecting group therein. Inthe combinatorial libraries, structural diversity may occurs in the metal ion-binding domain or outside the metal ion-binding domain.
In the combinatorial libraries, one or more constituent library members may include at least one amino acid residue or mimic of an amino acid residue in the sequence at the N- or C-terminus of the metal ion-binding domain containing at least one S wherein the said S is protected by a non-orthogonal S-protecting group, whereby the orthogonal S-protecting group may be removed without removing the non-orthogonal S-protecting group.
For combinatorial libraries limited to amino acids, the amino acid residue containing at least one S wherein the said S is protected by an orthogonal S-protecting group can be an L- or D-3-mercapto amino acid, including but not limited to L- or D-cysteine or L- or D-penicillamine. For combinatorial libraries including amino acid residues and mimics of amino acid residues, the residue containing at least one S wherein the said S is protected by an orthogonal S-protecting group can be an L- or D-3- mercapto amino acid, including but not limited to L- or D-cysteine or L- or D-penicillamine; 3-mercapto phenylananine; 2-mercaptoacetic acid; 3-mercaptopropionic acid; 2-mercaptopropionic acid; 3- mercapto-3, 3, -dimethyl propionic acid; 3-mercapto-3,3,-diethyl proprionic acid; 3-mercapto,3-methyl propionic acid; 2-mercapto,2-methyl acetic acid; 3-cyclopentamethlene, 3-mercaptopropionic acid; or 2- cyclopentamethlene,2-mercaptoacetic acid.
It is an object of this invention to devise, demonstrate and illustrate the preparation and use of highly specific conformationally restricted peptides, peptoids, related pseudopeptides, peptidomimetics and metallo-constructs formed by complexing sequences thereof to a desired metal ion so that the topography of the side chains in the resulting complex is a biologically active three-dimensional structure specific for meianocortin receptors.
Another object of this invention is to provide peptide-metal ion complexes specific for meianocortin receptors and which have a higher level of stability and are less susceptible to proteolysis than either the uncomplexed peptide, or other peptides known in the art. Another object of this invention is to provide peptide-metal ion complexes that are specific for different subsets of meianocortin receptors, such as specific only for MC1-R or for MC4-R.
Another object of this invention is to provide peptide-metal ion complexes which are specific for meianocortin receptors and which are agonists or antagonists.
Another object of this invention is to provide for peptide analogs which are not conformationally restricted in the absence of a metal ion, whereby the uncomplexed peptide analog is either inactive or demonstrates low potency, but which is conformationally restricted on complexation with a metal ion and specific for meianocortin receptors with high potency.
Another object of this invention is to utilize metal complexation in a peptide specific for meianocortin receptors to cause specific regional conformational restrictions in the peptide so that the peptide conformation at the metal binding site is conformationally fixed on metal complexation. Another object of this invention is to complex a peptide to a metal ion, whereby the resulting metallopeptide is specific for meianocortin receptors, and exhibits a preferred in vivo biodistribution profile, rate and mode of clearance, bioavailability and pharmacokinetics in mammals.
Another object of this invention is to provide peptide-metal ion complexes specific for meianocortin receptors utilizing stable non-radioactive metal ions, for use in therapeutic treatment of disease, including as an agent to modify energy metabolism and feeding behavior, such as for treatment of pathologic obesity and related conditions.
Another object of this invention is to provide peptide-metal ion complexes specific for meianocortin receptors utilizing metal ions which are radionuclides for use in diagnostic methods, including imaging and staging of melanoma tumors and melanoma tumor metastases.
Another object of this invention is to provide peptide-metal ion complexes specific for meianocortin receptors utilizing stable non-radioactive metal ions, for use as a prevention agent against ultra-violet radiation-induced DNA damages, including sunlight-induced DNA damage in the skin.
Another object of this invention is to provide peptide-metal ion complexes specific for meianocortin receptors utilizing stable non-radioactive metal ions, for use as a tanning agent, including but not limited to therapeutic use as a tanning agent.
Another object of this invention is to provide peptide-metal ion complexes specific for meianocortin receptors utilizing stable non-radioactive metal ions, for use as anti-inflammatory agents.
Another object of this invention is to complex peptides with radiometal ions, including but not limted to technetium-99m, for use in diagnostic imaging, so that the resulting peptide-metal ion complex is substantially more specific for meianocortin receptors than the uncomplexed peptide molecule, and the resulting radiolabeled species is essentially carrier-free in terms of specificity for meianocortin receptors.
Another object of this invention is to complex peptides with radiometal ions, including radioisotopes of rhenium such as rhenium-186 and rhenium-188, for use in targeted radiotherapy, such as for treatment of melanoma.
Another object of this invention is to provide peptide-metal ion complexes specific for meianocortin receptors that can transit the gut-blood barrier, without significant enzymatic or peptidase degradation, and may be adapted for oral administration. Another object of this invention is to provide libraries of conformationally constrained peptide- metal ion complexes directed to meianocortin receptors.
Another object of this invention is to provide combinatorial peptide libraries of peptide-metal ion complexes specific for meianocortin receptors, wherein the peptides include a metal ion-binding domain, such that a specific conformational restriction is obtained upon labeling the peptides with a metal ion. Another object of this invention is to provide combinatorial peptide libraries of peptide-metal ion complexes specific for meianocortin receptors, wherein the amino acids comprising the peptides may be naturally occurring amino acids, isomers and modifications of such amino acids, non-protein amino acids, post-translationally modified amino acids, enzymatically modified amino acids, constructs or structures designed to mimic amino acids, and the like, so that the library includes pseudopeptides and peptidomimetics. Another object of this invention is to provide metallopeptide libraries specific for one or more meianocortin receptors, wherein the metallopeptides include a metal ion-binding domain, such that a determined conformational restriction is obtained upon labeling the peptides with a metal ion, and the metallopeptides further include distinct, unique and different amino acid sequences.
Another object of this invention is to provide both soluble and solid phase metallopeptide libraries specific for one or more meianocortin receptors, wherein the metallopeptides include a metal ion-binding domain.
Another object of this invention is to provide methods for synthesis of peptides specific for meianocortin receptors wherein the peptide contains a reactive SH group forming a part of a metal ion- binding domain, whereby the reactive SH group is protected during synthesis, and is deprotected only upon complexing the peptides with a metal ion.
Another object of this invention is to provide combinatorial metallopeptide libraries specific for meianocortin receptors wherein the peptides forming the library contain a reverse turn structure as a consequence of metal ion complexation.
Another object of this invention is to provide a method for rapid and efficient complexation of a pool of diverse peptides specific for meianocortin receptors with a metal ion, including a rhenium metal ion.
Another object of this invention to provide libraries of conformationally constrained peptide-metal ion complexes as surrogates for reverse turn structures, such as beta turns and gamma turns commonly found in naturally occurring peptides and proteins specific for meianocortin receptors. The turns formed as a consequence of metal ion complexation are more stable than the naturally occurring turn structures, which are stabilized only by weaker interactions such as van der Waals' interactions and hydrogen bonds.
Another object of this invention is to provide combinatorial metallopeptide libraries wherein each of the peptides forming the library contain a reverse turn structure as a consequence of metal ion complexation.
Another object of this invention is to provide a method for the identification of specific metallopeptides through internal signatures resulting from use of metal ions with two or more isotopic peaks, such as through use of rhenium containing two isotopes in fixed relative abundance that differ in mass by 2 units. Other objects, advantages and novel features, and the further scope of applicability of the present invention, will be set forth in part in the detailed description to follow, taken in conjunction with the accompanying drawings, and in part will become apparent to those skilled in the art upon examination of the following, or may be learned by practice of this invention. The objects and advantages of this invention may be realized and attained by means of the instrumentalities and combinations particularly pointed out in the appended claims.
BRIEF DESCRIPTION OF THE DRAWINGS The accompanying drawings, which are incorporated into and form a part of the specification, illustrate several embodiments of the present invention and, together with the description, serve to explain the principles of the invention. The drawings are only for the purpose of illustrating a preferred embodiment of the invention and are not to be construed as limiting the invention. In the drawings:
Fig. 1 is a molecular structure for Template 1. Fig. 2 is a molecular structure for Template 2.
Fig. 3 is a molecular structure for Template 3.
Fig. 4 is a molecular structure for Template 4.
Fig. 5 is a molecular structure for Template 5.
Fig. 6 is a molecular structure for Template 6. Fig. 7 is a molecular structure for Template 7.
Fig. 8 is a flow chart of a split pool and combination synthesis method according to Example 2.
Fig. 9 is a mass spectrum of a library pool of 25 metallopeptides synthesized according to Example 2.
Fig. 10 is a mass spectrum of a library pool of 4 metallopeptides synthesized according to Example 6.
Figs. 11 A - 11 E are reversed phased HPLC profiles of a library pool of 4 metallopeptides synthesized according to Example 6.
DESCRIPTION OF THE PREFERRED EMBODIMENTS (BEST MODES FOR CARRYING OUT THE INVENTION)
Definitions. Certain terms as used throughout the specification and claims are defined as follows:
The terms "bind," "binding," "complex," and "complexing," as used throughout the specification and claims, are generally intended to cover all types of physical and chemical binding, reactions, complexing, attraction, chelating and the like.
The "peptides" of this invention can be a) naturally-occurring, b) produced by chemical synthesis, c) produced by recombinant DNA technology, d) produced by biochemical or enzymatic fragmentation of larger molecules, e) produced by methods resulting from a combination of methods a through d listed above, or f) produced by any other means for producing peptides
By employing chemical synthesis, a preferred means of production, it is possible to introduce various ammo acids which do not naturally occur along the chain, modify the N- or C-terminus, and the like, thereby providing for improved stability and formulation, resistance to protease degradation, and the
The term "peptide" as used throughout the specification and claims is intended to include any structure comprised of two or more ammo acids, including chemical modifications and derivatives of ammo acids For the most part, the peptides of this invention comprise fewer than 100 ammo acids, and preferably fewer than 60 ammo acids, and most preferably ranging from about 2 to 20 ammo acids The ammo acids forming all or a part of a peptide may be naturally occurring ammo acids, stereoisomers and modifications of such ammo acids, non-protein am o acids, post-translationally modified ammo acids, enzymatically modified am o acids, constructs or structures designed to mimic ammo acids, and the like, so that the term "peptide" includes pseudopeptides and peptidomimetics, including structures which have a non-peptidic backbone The term "peptide" also includes dimers or multimers of peptides A "manufactured" peptide includes a peptide produced by chemical synthesis, recombinant DNA technology, biochemical or enzymatic fragmentation of larger molecules, combinations of the foregoing or, in general, made by any other method
The "ammo acids" used in this invention, and the term as used in the specification and claims, include the known naturally occurring protein am o acids, which are referred to by both their common three letter abbreviation and single letter abbreviation See generally Synthetic Peptides A User's Guide, GA Grant, editor, W H Freeman & Co , New York, 1992, the teachings of which are incorporated herein by reference, including the text and table set forth at pages 11 through 24 As set forth above, the term "am o acid" also includes stereoisomers and modifications of naturally occurring protein ammo acids, non-protein am o acids, post-translationally modified ammo acids, enzymatically synthesized ammo acids, deπvatized ammo acids, constructs or structures designed to mimic amino acids, and the like Modified and unusual ammo acids are described generally in Synthetic Peptides A User's Guide, cited above, Hruby VJ, Al-obeidi F and Kazmierski W Biochem J 268 249-262, 1990, and Toniolo C Int J Peptide Protein Res 35 287-300, 1990, the teachings of all of which are incorporated herein by reference In addition, the following abbreviations have the meanings giving
Abu - gamma-ammo butyric acid
2-Abz - 2-amιno benzoic acid
3-Abz - 3-amιno benzoic acid
4-Abz - 4-amιno benzoic acid Ache - 1-amιno-cyclohexane-1 -carboxyhc acid
Acpc - 1-amιno-cyclopropane-1 -carboxyhc acid
12-Ado - 12-amιno dodecanoic acid
7-Ahept - 7-amιno heptanoic acid
Aic - 2-amιnoιndane-2-carboxylιc acid 6-Ahx - 6-amιno hexanoic acid
8-Aoc - 8-amιno octanoic acid
Arg(Tos) - NG-para-tosyl-argιnιne
Asp(anιhno) - beta-anihno-aspartic acid Asp(3-CI-anιlιno) beta-(3-chloro-anιhno)-aspartιc acιd
Asp(3,5-dιCI-anιlιno)- beta-(3,5-dιchloro anιlιno)-aspartιc acid
D/L Ate (D,L)-2-amιnotetrahn-2-carboxylιc acιd
11-Aun 11 -ammo undecanoic acid
AVA 5-amιno valeric acid
Bip biphenylalanine
Bz Benzoyl
Cha Cyclohexylalanme
Chg Cyclohexylglycme
Dip 3,3-Dιphenylalanιne
Et- Ethyl
GAA epsilon-guanidmo acetic acid
GBzA 4-guanιdιno benzoic acid
B-Gpa 3-guanιdιno propionic acid
GVA(CI) beta-chloro-epsilon-guanidino valeric acid
Hphe Homophenylalan e
Inp isonipecotic acid
Lys(Z) N-epsilon-benzyloxycarbonyl-lysme
Me- Methyl
NaM 3-(1 -naphthyl)alanιne
Nal 2 3-(2-naphthyl)alanιne
(N-Bzl)Nal 2 N-benzyl-3-(2-naphthyl) alanine
(N-PhEt)Nal 2 N(2-phenylethyl)-3-(2-naphthyl) alamne
Phg Phenylglycine pF-Phe para-fluoro-phenylalanine
Phe(4-Br) 4-bromo-phenylalanιne
Phe(4-CF3) 4-trιfluoromethyl-phenylalanιne
Phe(4-CI) 4-chloro-phenylalanιne
Phe(2-CI) 2 chloro-phenylalanine
Phe(2, 4- diCI) 2,4,-dιchloro-phenylalanιne
Phe(3,4- diCI) 3,4,-dιchloro-phenylalanιne
Phe(3,4- diF) 3,4,-dιfluoro-phenylalanιne
Phe(4-I) 4-ιodo-phenylalanιne
Phe(3,4- di-OMe) - 3,4,-dιmethoxy-phenylalanιne
Phe(4- Me) 4-methyl-phenylalanιne
Phe(4-N02) 4-nιtro-phenylalanιne
Pip Pipecohc acid
Qal(2') beta-(2-quιnolyl)-alanιne
Sal 3-styrylalanιne
TFA tπfluoroacetyl
Tic 1 ,2,3,4-tetrahydroιsoquιnohne-3-carboxyhc acid
Tie tert-butylalanme
Tyr(Bzl) O-benzyl-tyrosine
Tyr(BzlDιCI 2,6) 0-(2,6 dιchloro)benzyl-tyrosιne
A single ammo acid, including stereoisomers and modifications of naturally occurring protein amino acids, non-protein ammo acids, post-translationally modified ammo acids, enzymatically synthesized ammo acids, deπvatized ammo acids, constructs or structures designed to mimic am o acids, and the like, including all of the foregoing, is sometimes referred to herein as a "residue "
The library constructs of this invention also include a metal ion, which may be an ionic form of any element in metallic form, including but not limited to metals and metalloids The metal ion may, but need not, be radioactive, paramagnetic or superparamagnetic The metal ion can be of any oxidation state of any metal, including oxidation states of vanadium (V), manganese (Mn), iron (Fe), cobalt (Co), nickel (Ni), copper (Cu), zinc (Zn), gallium (Ga), arsenic (As), selenium (Se), yttrium (Y), molybdenum (Mo), technetium (Tc), ruthenium (Ru), rhodium (Rh), palladium (Pd), silver (Ag), cadmium (Cd), indium (In), tin (Sn), tungsten (W), rhenium (Re), osmium (Os), iridium (Ir), platinum (Pt), gold (Au), mercury (Hg), thallium (Tl), lead (Pb), bismuth (Bi), polonium (Po), astatine (At), samarium (Sm), europium (Eu), and gadolinium (Gd). The metal ion can also be a radionuclide of any of the foregoing, including In, Au, Ag, Hg, Tc, Re, Sn, At, Y and Cu. A preferred metal ion with a tetradentate coordination sphere is Re. For radiopharmaceutical applications, or applications wherein a radioisotope is desirable for screening, an alpha-, gamma- or beta-emitting radionuclide may be employed.
The coordination sphere of various common metal ions, in general, is tetradentate to hexadentate. In one embodiment according to this invention, an amino acid or amino acid mimetic sequence is included within each library member such that it contains the desired number of groups (4 to 6 in most cases) for complexing with the metal. The molecule is designed so that, upon complexing with a metal, it forms a mimic of a reverse turn structure about the site of metal complexation. A metal with coordination number 4, 5 or 6, and complexing respectively with an amino acid sequence forming a tetra, penta, or hexadentate ligand, will fold and constrain the ligand. The amino acid or amino acid mimetic sequence forming a ligand is defined as the metal ion-binding domain ("MBD") of the peptide or peptidomimetic. A highly flexible molecule like a peptide, in other words, is folded to form a kind of reverse turn upon its complexation with a metal. This resulting turn is a highly constrained structure in the conformational sense.
The biological-binding domain ("BBD") of the peptide or peptidomimetic is defined in the specification and claims as a sequence of one or more amino acids which constitute a biologically active sequence, exhibiting binding to a melanocotin-associated receptor, including MC1-R, MC2-R, MC3-R, MC4-R and MC5-R, thereby constituting the peptide as a member of a specific binding pair. The BBD also includes any sequence, which may be consecutive amino acids or mimetics (sychnological) or non- consecutive amino acids or mimetics (rhegnylogical) which forms a melanocortin-associated ligand, which ligand is capable of forming a specific interaction with its acceptor or receptor. The term "receptor" is intended to include both acceptors and receptors. The receptor may be a biological receptor. The sequence or BBD may transmit a signal to the cells, tissues or other materials associated with the biological receptor after binding, but such is not required. The BBD may be either an agonist or antagonist, or a mixed agonist-antagonist. A peptide or peptidomimetic complexed to a metal ion with such a BBD constitutes a member of a "specific binding pair," which specific binding pair is made up of at least two different molecules, where one molecule has an area on the surface or in a cavity which specifically binds to a particular spatial and polar organization of the other molecule. Frequently, the members of a specific binding pair are referred to as ligand and receptor or anti-ligand.
The BBD is further defined to include the portion of a construct, wherein the construct is a peptidomimetic, peptide-like, or metallo-construct molecule, which upon binding of the construct with a metal ion, is biologically active, exhibiting binding to a meianocortin receptor found on cells, tissues, organs and other biological materials. The BBD may, in this instance, be sychnological or rhegnylogical, and generally has the attributes and functions of a BBD of a peptide. The BBD may be coextensive with all or a portion of the MBD, so that the same amino acids or other residues which constitute the MBD also constitute all or a part of the BBD. In some instances, one or amino acids of the MBD will form a part of the BBD, and one or more additional amino acids, which are not part of the MBD, form the remainder of the BBD.
Conformationai constraint refers to the stability and preferred conformation of the three- dimensional shape assumed by a peptide or other construct. Conformationai constraints include local constraints, involving restricting the conformationai mobility of a single residue in a peptide; regional constraints, involving restricting the conformationai mobility of a group of residues, which residues may form some secondary structural unit; and global constraints, involving the entire peptide structure. See generally Synthetic Peptides: A User's Guide, cited above.
The primary structure of a peptide is its amino acid sequence. The secondary structure deals with the conformation of the peptide backbone and the folding up of the segments of the peptide into regular structures such as α-helices, β-sheets, turns and the like. Thus, the three-dimensional shape assumed by a peptide is directly related to its secondary structure. See generally Synthetic Peptides: A User's Guide, cited above, including the text, figures and tables set forth at pages 24-33, 39-41 and 58-67. A global structure refers to a peptide structure which exhibits a preference for adopting a conformationally constrained three-dimensional shape.
The product resulting from the methods set forth herein can be used for both medical applications and animal husbandry or veterinary applications. Typically, the product is used in humans, but may also be used in other mammals. The term "patient" is intended to denote a mammalian individual, and is so used throughout the specification and in the claims. The primary applications of this invention involve human patients, but this invention may be applied to laboratory, farm, zoo, wildlife, pet, sport or other animals. The products of this invention may optionally employ radionuclide ions, which may be used for diagnostic imaging purposes or for radiotherapeutic purposes.
Peptide and Metallo-Construct Molecule Libraries and Combinatorial Chemistries. Using the methods of this invention, libraries of peptides and peptidomimetics are designed wherein each constituent library member includes an MBD sequence necessary for providing a coordination site for complexation with a metal, it being understood that such sequence may differ among the constituent members of the library. Upon complexing the MBD with a metal, a specific structure results, forming a mimic of a reverse turn structure. The specific stereochemical features of this complex are due to the stereochemistry of the coordination sphere of the complexing metal ion. Thus the preferred geometry of the coordination sphere of the metal dictates and defines the nature and extent of conformationai restriction.
Libraries of this invention contain constituents which are either locally or globally constrained structures. Libraries may include molecules with either local conformation restrictions or global conformation restrictions, or some combination thereof. This aspect of the invention includes a variety of methods of synthesis, screening and structural elucidation of positive hits in screening systems. The importance of these aspects is well known to those skilled in the art and will also become evident from the following description and examples. In general, most of the metals that may prove useful in this invention have a coordination number of 4 to 6, and rarely as high as 8, which implies that the putative MBD must be made of residues with reactive groups located in a stereocompatible manner so as to establish a bond with a metal ion of given geometry and coordination sphere Coordinating groups in the peptide chain include nitrogen atoms of amme, amide, imidazole, or guanidmo functionalities, sulfur atoms of thiols or disulfides, and oxygen atoms of hydroxy, phenolic, carbonyl, or carboxyl functionalities In addition, the peptide chain or individual ammo acids can be chemically altered to include a coordinating group, such as oxime, hydrazmo, sulfhydryl, phosphate, cyano, pyπdino, pipeπdino, or morphohno groups For a metal with a coordination number of 4, a tetrapeptide ammo acid sequence may be employed (such as Gly-Gly-Gly- Gly), or a tnpeptide am o acid sequence in which at least one of the am o acids has a side chain with a coordinating group can similarly be employed (such as Gly-Gly-Cys) The side chain can have a nitrogen, oxygen or sulfur-based coordination group Thus, an ammo acid sequence can provide an N4, N3S, N2S2, NS3, N2SO or similar ligand, yielding tetradentate coordination of a metal ion utilizing nitrogen, sulfur and oxygen atoms In another embodiment of the invention, the MBD includes one or more ammo acid residues and one or more deπvatized ammo acids or spacer sequences, with the denvatized am o acid or spacer sequence having a nitrogen, sulfur or oxygen atom available for complexing with the various oxidation states of the metal Examples of denvatized ammo acids include amide, primary alkyl or aryl amide, 1 ,2,3,4-tetrahydroιsoquιnohne-2-carboxyhc acid and its corresponding 7-hydroxy derivative, N- carboxymethylated ammo acids, 2'-mercapto-Trp, Nβ-(2 mercaptoethane)-α,β-dιamιnopropιonιc acid and similar higher homologs of other homologous ammo acids, Nβ-(2 amιnoethane)-α,β-dιamιnopropιonιc acid and similar higher homologs of other homologous am o acids, Np-(pιcohnoyl)-α,β-dιamιnopropιonιc acid and similar higher homologs of other homologous ammo acids, β-(pιcolylamιde)-Asp and similar homologs of other homologous ammo acids, Nβ-(2-amιno-benzoyl)-α,β-dιamιnopropιonιc acid and similar higher homologs of other homologous ammo acids, β-(2-amιdomethylpyπdιne)-Asp and similar homologs of other homologous ammo acids, N-benzyloxycarbonyl am o acid, N-tert butyloxycarbonyl ammo acid, N-fluorenylmethyloxycarbonyl ammo acid and other similar urethane-protected ammo acid derivatives, and other denvatized or synthetic ammo acids relating to any of the foregoing Examples of spacer sequences which may be employed in this invention include 2-mercaptoethylamιne, succmic acid, glutanc acid, 2-mercaptosuccιnιc acid, ethylenediamine, diethylenetriamme, tnethylenetetraamme, tetraethylenepentaamme, glycol, polyethylene glycol, thioglycohc acid, mercaptopropionic acid, pyπdine- 2-carboxylate, picolylamme, 2-mercaptoanιhne, 2-amιnobenzoιc acid, and 2-amιnomethylpyrιdιne In general, any sequence which may be linked, directly or indirectly, to one or two ammo acids so as to form a continuous sequence, and which has a nitrogen, sulfur or oxygen atom available for complexing with the valences of the metal ion, may be employed as an element of the MBD
S-Protected Thiol Group Compounds in Metallo-Libranes A free thiol (SH) group is preferred for complexation of most metal ions to the peptides and peptidomimetics of this invention, and in many cases an SH group is necessary in order to form a stable exchange-inert complex with a metal Peptides and other organic molecules with free SH groups, however, are easily oxidized in air and in solution, and can often form a disulfide-linked dimer If more than one free SH group is present in a molecule, oxidation may lead to a complex polymer Similarly, if a mixture of different peptides or organic molecules with free SH groups are prepared, oxidation generally leads to a complex mixture of polymers of unknown composition This is of serious concern in preparing libraries of metallopeptides or other organic molecules where one or more SH group is intended for use in metal complexation
A variety of SH protecting groups have been employed for a variety of purposes, including radiopharmaceutical manufacture and formulation For example, in its protected form S-Benzoyl- mercaptoacetyl-glycyl-glycyl-glycme (Bz-MAG3) has been used to complex Tc-99m (99mTc) under conditions where the S-Bz group splits during 99 Tc complexation The use of S-Bz protection, however, is not compatible with the methods of peptide synthesis
In order to construct metallopeptide libraries of this invention which incorporate an SH group, if mixed pool synthesis is employed the peptides must be S-protected derivatives The SH protecting group is chosen such that (a) the synthesis of peptide derivatives with S-protecting group is compatible with methods of solution and solid phase peptide synthesis, so that the S-protecting group is stable during synthetic procedures, and (b) the S-protecting group can be deprotected in situ, without cleavage from the resin in the case of solid phase synthesis, during the metal complexation step Many prior art methods, such as Bz-MAG3, meet at most only one of the two criteria specified above (Bz-MAG3 meets only criterion (a) above)
Use of orthogonally S-protected thiol groups permits synthesis of metallo-compounds in a single pot A mixture of compounds, each compound containing an orthogonal S-protected group ("OSPG"), is used for complexation with a metal ion, and it is only during metal ion complexation that the S-protected group is deprotected, and accordingly polymerization and cross-linking is avoided This procedure thus provides homogenous libraries of metallo-compounds
One OSPG meeting the criteria specified above, and which can be used in this invention, employs an S'Bu (S-thio-butyl or S-t-butyl) group to protect the SH group The S4Bu group is stable under both the acidic and basic conditions typically employed in peptide synthesis Further, the S(Bu group may be cleaved by reduction using a suitable phosphme reagent, which reduction step may be employed immediately prior to or in conjunction with complexation of a metal ion to the peptide Such OSPG cleavage does not cleave the peptide from the resin, or otherwise alter the structure of the peptide
Another OSPG meeting the criteria specified above and suitable for this invention employs an S- Acm (S-acetamidomethyl) group to protect the SH group The Acm group is also stable under the acid and base conditions usually employed during peptide synthesis The S-Acm group may be removed by treatment of S-Acm-protected peptide or peptide resin with mercury (II) acetate or silver (I) tertrafluoroborate, which liberates the thiol peptide in its mercury or silver ion-complexed state Free thiol-containmg peptide can then be recovered by treating the mercury or silver ion and thiol complexed salts with an excess of a thiol-containmg reagent, such as beta-mercaptoethanol or dithiothreitol The resulting peptide is then used for metal complexation Alternatively, the mercury or silver ion and thiol complexed peptide may be directly treated with a metal ion complexing reagent to form the desired metallopeptide
Other examples of OSPGs for metallopeptides include 4-methoxytrιtyl (Mmt), 3-nιtro-2- pyπdinesulfenyl (Npys) and S-sulfonate (S03H) Mmt is selectively removed upon treatment with 1 % TFA in dichloromethane Npys and S-sulfonate are selectively removed by treatment with a thiol- containmg reagent such as beta-mercaptoethanol or dithiothreitol or a phosphme reagent such as tnbutyl phosphme The Npys group (R G Simmonds RG et al Int J Peptide Protein Res, 43 363,1994) is compatible with Boc chemistry for peptide synthesis and the S-sulfonate (Maugras I et al Int J Peptide Protein Res, 45 152, 1995) is compatible with both Fmoc and Boc chemistries Similar OSPGs derived from homologous series of S-alkyl, or S-aryl, or S-aralkyl may also be used in this invention A primary characterization of the OSPG is that its use results in the formation of a disulfide (S-S) bond utilizing one sulfur atom each from the thiol-containmg am o acid and the protecting group In addition, the resulting disulfide (S-S) bond is cleavable by the use of any of a variety of disulfide cleaving agents, including but not limited to phosphme- and thiol-containmg reagents The method employing S*Bu protected SH groups, or other OSPGs, may be employed for the generation of either solid phase or soluble libraries For solid phase libraries, peptides may be synthesized by use of conventional Fmoc chemistry In the case of conventional Fmoc chemistry, Fmoc-L-Cys-(S'Bu) is coupled to an appropriate resin, via one or more intermediate ammo acids, and additional am o acids are thereafter coupled to the L-Cys-(S'Bu) residue S'Bu may be employed with either L- or D-Cys, and any of a variety of other ammo acids, including designer or unnatural ammo acids and mimics thereof, characterized by an SH group available for binding to a metal ion, including, but not limited to, 3-mercapto phenylanan e and other related 3-mercapto ammo acids such as 3- mercapto va ne (penicillamme), 2-mercaptoacetιc acid, 3-mercaptopropιonιc acid, 2-mercaptopropιonιc acid, 3-mercapto-3,3,-dιmethyl propionic acid, 3-mercapto,3-methyl propionic acid, 3-mercapto-3,3,- diethyl propnonic acid, 2-mercapto,2-methyl acetic acid, 3-cyclopentamethlene,3-mercaptopropιonιc acid, 2-cyclopentamethlene,2-mercaptoacetιc acid and related ammo acids In all these cases, S- protection can be by S'Bu, S-Acm, Mmt, Npys, S-sulfonate and related groups, as described above
Metal Ion Complexation to MBD The complexation of metal ions to the sequences in a library, and specifically to the MBD, is achieved by mixing the sequences with the metal ion This is conveniently done in solution, with the solution including an appropriate buffer In one approach, the metal ion is, when mixed with the peptide or peptidomimetic constituents, already in the oxidation state most preferred for complexing to the MBD Some metal ions are complexed in their most stable oxidation state, such as calcium (II), potassium (I), indium (III), manganese (II), copper (II), zinc (II) and other metals In other instances, the metal must be reduced to a lower oxidation state in order to be complexed to the MBD This is true of ferrous, ferric, stannous, stannic, technetιumoxo[V], pertechnetate, rhenιumoxo[V], perrhenate and other similar metal ions Reduction may be performed prior to mixing with the sequences, simultaneously with mixing with the sequences, or subsequent to mixing with the sequences Any means of reduction of metal ions to the desired oxidation state known to the art may be employed For tetradentate coordination with a metal ion, rhenium is a preferred ion. Solid phase resin bound peptide or peptidomimetic sequences may be labeled with rhenium ion by treatment with the rhenium transfer agent ReOCI3(PPh3)2 in the presence of 1 ,8-Diazabicyclo[5,4,0] undec-7-ene as a base. The sequences may then be cleaved from the resin. Alternatively, peptide or peptidomimetic sequences in a soluble library may similarly be labeled by treatment with the rhenium transfer agent ReOCI3(PPh3)2 in the presence of 1 ,8-Diazabicyclo[5,4,0] undec-7-ene as a base. Metal complexation in the presence of 1 ,8-Diazabicyclo[5,4,0]undec-7-ene (DBU) as a base can conveniently be accomplished at ambient room temperature. In an alternative method of metal complexation a mild base, such as sodium acetate, can be used. In this case the thiol-containing sequence, either in solution or bound to solid phase, is taken in a suitable solvent, such as DMF, NMP, MeOH, DCM or a mixture thereof, and heated to 60-70°C with the rhenium transfer agent ReOCI3(PPh3)2 in the presence of sodium acetate for 15 minutes. Similarly, other bases such as triethylamine, ammonium hydroxide and so on, may be employed. According to this invention, MeOH is a preferred choice of solvent for rhenium complexation in the case of S- deprotected peptides in solution. The solvent choice for S-deprotected peptides still attached to the solid phase is guided mainly by considerations of superior solvation (swelling) of the solid phase. DMF and NMP may be employed. Various mixtures of these solvents, also in combination with MeOH, and DCM, CHCI3 and so on, may also be employed to yield optimized complexation results. In one embodiment of this invention, an S*Bu protected peptide is treated in situ with rhenium transfer agent in the presence of DBU and tributylphosphine to effect S-deprotection and rhenium complexation in one pot. Alternately, complexation of rhenium to the SlBu protected peptide in the presence of rhenium perrhenate may be accomplished by treatment with Sn[ll]CI2. This reagent effects S-deprotection as well as conversion of Re04 state to ReO state in situ to cause complexation of the rhenium to the S-deprotected peptide. A preferred procedure in this invention is the use of SlBu protected peptide with S-deprotection by treatment with tributylphosphine, and metal complexation of the resulting peptide utilizing ReOCI3(PPh3)2 in the presence of DBU at room temperature.
In the libraries of this invention, the MBD forms a reverse turn structure upon complexation with a metal ion, with the library constructed such that side chains of amino acids within the MBD are varied, and similarly amino acids not forming a part of the MBD are also varied. Various compounds in a library of metallopeptides can be obtained by varying the sequence of amino acids in a set of peptides that are all optimized to form a complex of nearly similar geometry when coordinated with a metal ion. This optimization can be obtained, for example, by appropriate positioning of amino acids having high affinity to complex a metal ion. Examples of naturally occurring amino acids with high affinity for metal complexation include Cys and His. A library of such peptides, therefore, would have at least one of these amino acids that is suitably placed in the sequence, with this amino acid being common to all the molecules in the library, with this amino acid thus non-randomized. A conceptual, generalized view of a solid phase library of metallopeptides that is constructed using local conformationai restriction is:
A= _ o
O ^ N N CQ-Peptide Chain-Resin
M I
A, N S ^ CO
Peptide Chain
where M is a metal ion, Ai and A2 are amino acid side chains forming parts of the reverse turn structure which is the BBD, and "Peptide Chain" denotes one or more amino acids. A similar library can also be constructed in which the components are soluble, and thus not bound to a resin.
Another embodiment of this invention provides for construction of a library with global conformationai restriction. In this embodiment, the MBD can be held constant, and a randomized or selected series of sequences of amino acids or mimetics varied to form the library. This type of library encompasses metallopeptides in which a MBD is an isosteric replacement for a disulfide, lactam, lactone, thioether or thioester moiety in cyclic peptides. In these constructs a set MBD is introduced between two pre-selected ends of a linear peptide or peptidomimetic that contains the randomized or selected series of sequences of amino acids or mimetics under investigation. The general structure of a metallopeptide library of this type is:
A, O
0 N N CO
M
A N S CO
Peptide Chain (Containing Biological Function Domain)— Resin where M is a metal ion and A, and A2 are structural elements that may provide additional stability to metal complexation, or may modulate biological activity, such as determining the organ of clearance, or altering biodistribution patterns or pharmacokinetics. The "Peptide Chain" sequence may be randomly varied, thereby resulting in a random library, or may be directed in a predetermined fashion, based upon known characteristics of the target molecule. One illustration of a globally-constrained metallopeptide library is a library of peptides wherein all the individual members of the library include a metal ion-binding domain and the library is directed specifically towards a family of meianocortin receptors. The general formula of this library of peptides, before complexation to a metal ion, is: A Aa Aa2- Aa3-A2~Res/n where X is a fixed MBD including a plurality of ammo acids, so that all of the valences of the metal ion are satisfied upon complexation of the metal ion with X, AT and A2 each comprise from 0 to about 20 ammo acids, and Aa^ Aa2 and Aa3 each comprise one or more am o acids connected to X through an amide, thioether, thioester, ester, carbamate, or urethane bond, wherein each of Aa^ Aa2 and Aa3 is varied In this example, the MBD may include an OSPG Other thiols in the sequence may optionally include S-protecting groups that are not orthogonal, such that the OSPG may be removed without removal of other S-protecting groups in the sequence
For solid phase libraries the peptide constructs are attached to a resin, and the resin is omitted for soluble libraries The functional equivalent of each these peptide libraries may also be obtained through the development of a library of non-ammo acid building blocks so as to result in structural mimics of these peptides The peptide bonds may be replaced by pseudopeptide bonds, such as thioamides, thioethers, substituted amines, carbanate, urethane, aliphatic moieties, and functionally similar constructs
A peptide library is first assembled according to the sequence specification and degeneration, as described above, by well-known methods of peptide synthesis These libraries can be synthesized as discreet, spatially addressable compounds in parallel synthesis, using split synthesis approaches, or by deconvolution techniques of soluble libraries Using similar methods, a pseudopeptide, peptidomimetic or non-peptide library can be obtained The non-peptide libraries may also optionally incorporate one of various tagging approaches that are well known to those skilled in the art Both solid-phase and soluble libraries can be obtained in this manner The entire library is then reacted with an appropriate metal- complexmg agent to obtain the corresponding metal-coordinated library, comprising a similar class of predetermined structures For example, to complex a peptide library with rheniumoxo metal ion, the peptide library can be treated with Re(0)CI3(PPh3)2 in the presence of sodium acetate This procedure results in quantitative complexation of ReO with the peptide In order to complex Zn, Co, Mn, Fe or Cu ions, the peptide library is treated with chloride or other suitable salts of these metal ions to yield the library of corresponding metal ions Essentially, a variety of metal ions can be used to construct different metallopeptide libraries One limiting factor in selection of the appropriate metal ion is the relative stability of a particular metal-peptide complex, related in large part to the metal-peptide binding constant or constants It is well known in the art that some metal-peptide constructs are stable only within specified pH or other special conditions, or are easily oxidized in air Some peptide-metal ion complexes, such as those with ReO, are stable in pure form and can be isolated and stored under normal storage conditions for a long period of time
A metallopeptide library constructed according to this invention can be screened to identify one or more receptor-bmdmg or pharmacologically-active meianocortin receptor-specific candidates by various techniques that have been reported in the prior art Both soluble and solid phase libraries may be directly employed in these assays These techniques include direct target binding approaches as described by Lam and coworkers (Lam KS et al: Nature 354:82-84, 1991 , Lam KS et al. Nature 360 768, 1992), deconvolution and iterative re-synthesis approaches (Houghten RA et al: Proc Natl Acad Sci USA 82:5131-5135, 1985; Berg et al- J Am Chem Soc 111 8024-8026, 1989, Dooley CT et al: Science 266:2019-2022, 1994, Blondelle SE: Antimicrob Agents Chemother 38.2280-2286, 1994; Panilla C Biopolymers 37.221-240, 1995), approaches using orthogonal pools of two co-synthesized libraries according to Tartar and coworkers ( Deprez B et al: J Am Chem Soc 117 5405-5406, 1995), positional scanning methods devised by Houghton and coworkers that eliminate iterative re-synthesis (Dooley CT et al. Life Sci 52 1509-1517, 1993, Pmilla C et al. Biotechmques 13:901-905, 1992; Pmilla C et al" Drug Dev Res 33 133-145, 1992), and a combination of the positional scanning method with split synthesis methods (Erb E et al Proc Natl Acad Sci USA, 91.11422-11426, 1994)
Among these techniques, the deconvolution and iterative resynthesis approach, the approach involving orthogonal pools of two co-synthesized libraries, and the positional scanning method may be directly applied to soluble metallopeptide libraries to elucidate the structure of a "hit," or peptide identified as a receptor-bmdmg or pharmacologically-active candidate in the screening process For solid phase libraries, other than spatially addressable parallel synthesis libraries, the structure of hits can be directly determined by various strategies well known to those skilled in the art These include direct mass spectrometπc analysis of compounds covalently bound to solid phase matrix of particles by the use of matrix-assisted laser desorption/ionization (MALDI) techniques (Siuzdak G et al Bioorg Med Chem Lett 6:979, 1996, Brown BB et ai Molecular Diversity 1 -4-12, 1995) The technique of creating a series of partially end-capped compounds at each of the synthetic steps during library assembly also helps in unambiguous identification by mass spectrometry (Youngquist RS et al J Am Chem Soc, 117 3900- 3906, 1995, Youngquist RS et al Rapid Commun Mass Spectr 8 77-81 , 1994) In addition to these analytical techniques, various encoding strategies that have been devised for structure elucidation in organic molecule-based libraries, including non-peptide and non-nucleotide libraries, may be utilized
Various encoding strategies, such as DNA encoding, peptide encoding, haloaromatic tag encoding, and encoding based on radiofrequency transponders, are now well known in the art and can be used directly in combination with metallopeptide libraries These tagging strategies require the incorporation of the tags during the course of synthesis of libraries, which can be accomplished during the construction of a metallopeptide libraries, since metal complexation is a final, post-synthesis step
Structural Diversity of Meianocortin Receptor-Specific Library Members Examples of some of the molecular templates which may be employed in this invention are shown below for tetradentate metal ion complexation In general, these molecular templates define groups of metallopeptides of this invention which, by substitution as provided, give rise to libraries of metallopeptides for use in determining meianocortin receptor-specific compounds, which may be either agonist or antagonist compounds The templates are provided without the metal ion, it being understood that the compounds exhibit enhanced specificity for meianocortin receptors only upon metal ion complexation. Ri - Lll - Aaa - Bbb - Ccc - R2 Template 1 and
Ri - Bbb - Aaa - Ccc - R2 Template 2
Where R-i is any functionality that potentiates the intrinsic activity of the remainder of the molecule, including but not limited to providing an auxiliary or secondary receptor contact. Any of a variety of amino acids and non-peptide groups may be employed, including an amino acid chain from one to about four neutral or charged L- or D-configuration amino acid residues. If R, is a non-peptide group, it may be a linear or branched alkyl, aryl, alkene, alkenyi or aralkyl chain.
Where Aaa is an L- or D-configuration cationic amino acid with a positively charged side chain. Preferred amino acids include L-configuration Lys, Arg, Orn, Dpr or Dbu, and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids. Aaa provides an N (nitrogen atom) for metal ion complexation.
Where Bbb is an L- or D-configuration amino acid with an aromatic side chain. Preferred amino acids include D-configuration Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nitro), Phe(4'-methyl), Phe(4'- Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl), or Tyr(BzlCI2), and derivatives, analogs or homologs thereof. The aromatic ring in Bbb may be functionalized with halogen, alkyl or aryl groups. Bbb provides an N for metal ion complexation.
Where Ccc is an amino acid that provides both an N, from the alpha amino group, and an S (sulfur atom), from a side chain group, for metal ion complexation. Preferred amino acids include L- or D-configuration Cys, Pen and Hcys.
Where Lll is a D-configuration amino acid with an aromatic side chain. Preferred amino acids include D-configuration Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nitro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl), or Tyr(BzlCI2), and derivatives, analogs or homologs thereof. The aromatic ring in Lll may be functionalized with halogen, alkyl or aryl groups. Lll does not provide an N for metal ion complexation.
Where R2 is an amino acid with an aromatic side chain. Preferred amino acids include L- or D- configuration Phe, Trp, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nitro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl) or Tyr(BzlCI2), and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids. The C- terminus may be free or amidated. R2 may also be the corresponding des-carboxyl amino acid of any of the foregoing. Alternatively, R2 may be eliminated.
Fig. 1 depicts the structure of Template 1, and Fig. 2 depicts the structure of Template 2, in both cases showing coordination with a tetradenate coordination sphere metal ion, resulting in an N3S-ι metal ion bond. R, - Ddd - Bbb - Aaa - R3 Template 3
Where R-i, Bbb and Aaa are as described above. Where Ddd is an amino acid that provides an S, from a side chain group, for metal ion complexation. Preferred amino acids include L- or D-configuration Cys, Pen and Hcys.
Where R3 is an amino acid with an aromatic side chain that provides an N for metal ion complexation. Preferred amino acids include L- or D-configuration Phe, Trp, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nitro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl) or Tyr(BzlCI2), and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids. The C-terminus may be free or amidated. R3 may also be the corresponding des-carboxyl amino acid of any of the foregoing.
Fig. 3 depicts the structure of Template 3, showing coordination with a tetradenate coordination sphere metal ion, resulting in an N3S-| metal ion bond.
R4- Eee - Bbb - Ccc - R2 Template 4
Where R2, Bbb and Ccc are as described above.
Where R4 is a functionality that provides a cationic center. Preferred amino acids include L- or D- configuration Lys, Arg, Orn, Dpr or Dbu, and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids. The N-terminus of the amino acid may be functionalized with any of a variety of neutral amino acid and non-peptide groups, including linear or branched alkyl, aryl, alkene, alkenyl or aralkyl chains.
Where Eee is an uncharged L- or D-configuration amino acid that provides an N for metal ion complexation. Preferred amino acids include Gly and L-configuration Ala, Nle, Leu, Val, Phe or Trp, and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids. In a preferred embodiment, Eee isn an amino acid with an aliphatic side chain.
Fig. 4 depicts the structure of Template 4, showing coordination with a tetradenate coordination sphere metal ion, resulting in an N^ metal ion bond.
Ri - Fff - Aaa - Ggg - Ccc - Rs Template 5 Where R1 ; Aaa and Ccc are as described above.
Where Fff is an L- or D-configuration aromatic amino acid. Preferred amino acids include D- configuration Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nitro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl), Tyr(BzlCI2), Tic, Tiq or Tea, and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids. The aromatic ring in Fff may be substituted with halogen, alkyl or aryl groups. Fff does not provide an N for metal ion complexation.
Where Ggg is an L- or D-configuration aromatic amino acid. Preferred amino acids include L- configuration Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nitro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl) or Tyr(BzlCI2), and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids. The aromatic ring in Ggg may be substituted with halogen, alkyl or aryl groups. Ggg provides an N for metal lon complexation
Where R5 is preferably an amide, substituted amide, ester or carboxylate group R5 may also be and L- or D-configuration ammo acid or ammo acid amide, including an aromatic, aliphatic, neutral or charged ammo acid Fig. 5 depicts the structure of Template 5, showing coordination with a tetradenate coordination sphere metal ion, resulting in an N3Si metal ion bond
R1 - Hhh - Aaa - Bbb - Ccc - R5 Template 6
Where R1t Aaa, Bbb, Ccc and R2 are as described above
Where Hhh is an L- or D-configuration cationic am o acid with a positively charged side chain Preferred ammo acids include L-configuration Lys, Arg, Orn, Dpr or Dbu, and derivatives, analogs or homologs thereof, including both natural and synthetic ammo acids Hhh does not provide an N for metal ion complexation
Fig. 6 depicts the structure of Template 6, showing coordination with a tetradenate coordination sphere metal ion, resulting in an N^ metal ion bond Ri - iii - Iii - Ccc - Jjj - Kkk - R2 Template 7
Where R^ Ccc and R2 are as described above
Where In is an L- or D-configuration ammo acid that provides an N for metal ion complexation Preferred ammo acids includes Ala, Gly, Nle, Val Leu, lie, His, Lys, or Arg, and derivatives, analogs or homologs thereof, including both natural and synthetic ammo acids Where JJJ is an L- or D-configuration ammo acid with an aromatic side chain Preferred am o acids include D-configuration Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nιtro), Phe(4'-methyl), Phe(4'- Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl), or Tyr(BzlCI2), and derivatives, analogs or homologs thereof The aromatic ring in JJJ may be functionalized with halogens, alkyl or aryl groups JJJ does not provide an N for metal ion complexation Where Kkk is an L- or D-configuration cationic ammo acid with a positively charged side chain
Preferred ammo acids include L-configuration Lys, Arg, Orn, Dpr or Dbu, and derivatives, analogs or homologs thereof, including both natural and synthetic am o acids Aaa does not provide an N for metal ion complexation
Fig. 7 depicts the structure of Template 7, showing coordination with a tetradenate coordination sphere metal ion, resulting in an N3Sι metal ion bond
The foregoing templates may be employed with tetradentate coordination sphere metal ions, such as various forms of technetium and rhenium Corresponding templates may be constructed for use with metal ions of other coordination spheres
Representative Peptides of this Invention Representative peptides of this invention were made using library and synthesis methods described herein, and selected peptides were tested using a Where Kkk is an L- or D-configuration cationic ammo acid with a positively charged side chain Preferred ammo acids include L-configuration Lys, Arg, Orn, Dpr or Dbu, and derivatives, analogs or homologs thereof, including both natural and synthetic ammo acids Aaa does not provide an N for metal ion complexation Fig. 7 depicts the structure of Template 7, showing coordination with a tetradenate coordination sphere metal ion, resulting in an N3Si metal ion bond
The foregoing templates may be employed with tetradentate coordination sphere metal ions, such as various forms of technetium and rhenium Corresponding templates may be constructed for use with metal ions of other coordination spheres Representative Peptides of this Invention Representative peptides of this invention were made using library and synthesis methods described herein, and selected peptides were tested using a binding assay Table 1 sets forth peptides of this invention, and the results of competitive inhibition binding assays The peptides were synthesized using conventional peptide synthesis methods, and were complexed with rhenium using the methods described herein The competitive inhibition binding assay was conducted using membranes prepared from hMC4-R and B-16 mouse melanoma cells (containing MC1-R) using 0 4 nM 125l-NDP-alpha-MSH (New England Nuclear, Boston, MA, USA) in 50 mM HEPES buffer containing 1 mM MgCI2, 2 mM CaCI2, and 5 mM KCI, at pH 7 2 The assay tube also contained a chosen concentration of the test peptide of this invention, complexed to a rhenium metal ion as indicated, for determining its efficacy in inhibiting the binding of 1 5l- NDP-alpha-MSH to its receptor Non-specific binding was measured by complete inhibition of binding of 125l-NDP-alpha-MSH in the assay with the presence of 1 μM alpha-MSH Incubation was for 90 minutes at room temperature, after which the assay mixture was filtered and the membranes washed three times with ice cold buffer The filter was dried and counted in a gamma counter for remaining radioactivity bound to the membranes 100% specific binding was defined as the difference in radioactivity (cpm) bound to cell membranes in the absence and presence of 1 μM alpha-MSH The cpm obtained in presence of test compounds were normalized with respect to 100% specific binding to determine the percent inhibition of 125l-NDP-alpha MSH binding Each assay was conducted in triplicate and the actual mean valves are described in Table 1 Negative numbers in Table 1 under "% Inhibition" result from experimental variance, and are indicative of no inhibition, similarly, values over 100% also result from experimental variance, and are indicative of complete inhibition
Figure imgf000029_0001
Figure imgf000030_0001
Figure imgf000031_0001
Figure imgf000032_0001
Figure imgf000033_0001
Figure imgf000034_0001
Figure imgf000035_0001
Figure imgf000036_0001
Figure imgf000037_0001
Figure imgf000038_0001
Figure imgf000039_0001
Figure imgf000040_0001
Figure imgf000041_0001
Figure imgf000042_0001
Figure imgf000043_0001
Figure imgf000044_0001
Figure imgf000045_0001
Figure imgf000046_0001
Figure imgf000047_0001
Figure imgf000048_0001
Figure imgf000049_0001
For selected peptides of this invention, a cAMP assay was also performed Human MC4-R or B-16 cells were grown to confluence in 96 well plates (plating approximately 250,000 cells per well) Identical sets of cells in triplicate were treated with 0 2 mM isobutylmethylxanthine (IBMX) and the chosen concentration of the rhenium metal ion-complexed peptide and the rhenium metal ion- complexed peptide in the presence of 20 nM alpha-MSH Cells similarly treated but with only 20 nM alpha-MSH served as positive control A buffer blank, as a negative control, was also included Incubation was for one hour at 37°C after which the medium was aspirated and the cells extarted with 150 microliters of HCI Total cAMP accumulated in 100 microliters of this solution was quantitated using a commercially available low pH cAMP assay kit (R&D Systems) by the procedure specified by the kit supplier The table shows the amount of cAMP accumulated in the cells upon exposure to the test compound alone and the presence of 20 nM alpha-MSH The rhenium metal ion-complexed peptide showing cAMP accumulation in the same range as or higher than the positive control (buffer blank in the presence of alpha-MSH) are considered to be agonist ligands The rhenium metal lon- complexed peptide showing accumulation in the same range as the negative control (buffer blank in the absence of alpha-MSH) are ineffective at the test concentration if the result is similar to the positive control where alpha-MSH is also present in the assay The rhenium metal ion-complexed peptide showing accumulation in the same range as the negative control are considered to be antagonists if there is inhibition in cAMP when alpha-MSH is present in the assay Values above the positive control are due to potent agonism, experimental variance or synergistic agonistic effects of rhenium metal ion- complexed peptide and alpha-MSH
Figure imgf000049_0002
Figure imgf000050_0001
Figure imgf000051_0001
Figure imgf000052_0001
Figure imgf000053_0001
Based on the foregoing studies, potential lead molecules following:
PL-1145 MC1-R agonist (Template 2)
PL-1144 MC1-R agonist (Template 2)
PL-1493 MC4-R antagonist (Template 1 )
PL-1883 MC4-R agonist (Template 1 )
PL-1489 MC4-R antagonist (Template 5)
PL-1950 MC4-R specific (Template 5)
PL-1947 MC4-R specific (Template 5)
PL-1581 Non-specific agonist (Template 5)
PL-1790 Non-specific agonist (Template 5)
PL-1791 Non-specific agonist (Template 5)
PL-1792 Non-specific agonist (Template 5)
PL-1605 Non-specific antagonist (Template 6)
PL-1758 Non-specific (Template 4)
PL-1877 MC4-R specific (Template 4)
PL-1902 MC4-R specific (Template 4)
PL-1909 MC4-R specific agonist (Template 4)
PL-1888 MC4-R specific (Template 7)
PL-1269 MC4-R specific antagonist (Template 3)
PL-1297 MC4-R specific antagonist (Template 3)
Radiopharmaceutical Applications. In one embodiment, metallopeptides of this invention that are MC1-R specific can be used, when complexed to 99 Tc as a radiodiagnostic agent, for imaging melanoma tumor metastases, and when complexed to rhenium-188 (188Re), rhenium-186 (186Re) or other therapeutic radionuclides as a radiotherapeutic agent for treatment of melanoma tumors and metastatic tumors.
Human melanoma has a complex antigenic profile. It is generally believed that malignant melanoma is derived by UV activity from DOPA positive melanocytes, the melanin (skin pigment) producing units. Primary diagnosis involves electron microscopic examination to reveal the presence or absence of pre-melanosomes. Melanotic melanoma is classified as dendritic, spindle, bizarre, large epitheloid, small nevus and so on. Amelanotic melanoma, on the other hand, is frequently misdiagnosed because the histology of these cells resembles that of malignant iymphoma, carcinoma or sarcoma. Therefore, morphological evaluation may not prove reliable for clinical diagnosis. Thus, there is a need for a receptor-specific diagnostic test, particularly to identify and locate metastatic melanoma tumors. Several studies have documented the presence of melanotropin receptors on primary human melanoma cells Melanotropin receptors have been reported as markers for melanotic and amelanotic human melanoma tumors In particular, the presence of MC1-R has been demonstrated in human melanoma cells by an antibody to MC1-R The melanotropin bioactive sequence, or message segment, is a tetrapeptide, His-Phe-Arg-Trp, that exist as a reverse turn Within the reverse turn, the His, Phe, and Trp residues have been postulated to form a hydrophobic receptor binding surface The His residue has recently been identified as a signal residue that helps discriminate between MC1-R and MC4-R Thus, it is possible to design metallopeptides of this invention which are specific for MC1-R, and bind MC1-R with high affinity, but which are not specific for MC4-R, or which bind MC4-R with low affinity One result is a 99mTc-labeled radioimaging agent with high specific affinity and selectivity for the MC1-R In addition, both agonists and antagonists metallopeptides of this invention are contemplated for comparative evaluation in imaging melanoma tumors
The product can be formulated as a single-vial, lyophilized radiolabehng kit containing the peptide in an uncomplexed state, buffer, and a reducing agent for pertechnetate To induce radiolabehng, resulting in a metallopeptide, the vial is incubated after the addition of sodium pertechnetate
In one method of labeling with 99mTc, a 5-10 μg sample of the peptide taken in 0 001 N aq HCI is mixed with 1-30 mCi of generator-eluted Na99mTc04 in a 5 ml serum vial The volume of the resulting mixture is adjusted to 600 μl using mjectable saline A 400 μl volume of freshly prepared and nitrogen-purged phthalate-tartrate-Sn(ll) buffer (40 10 1 mM) is added to the vial under a nitrogen head space The vial is immediately sealed and placed in a shielded boiling water bath After 15 minutes the vial is removed from the water bath and allowed to come to room temperature The radiochemical purity, as calculated from HPLC profiles, ranges from 90-99% The peptides of this invention may alternatively be labeled with 99mTc by other means, including use of stannous-tartrate-succinate buffer, stannous-EDTA-succmate buffer, stannous stabilized in glucoheptonate, or a stannous-borate-tartrate buffer, as well as other means of labeling with ""Tc known in the art
For radiopharmaceutical and other medical applications, the metallopeptides of this invention may be delivered to a subject by any means known in the art This includes intravenous injection, subcutaneous injection, administration through mucous membranes, oral administration, dermal administration, regional administration to an organ, cavity or region, and the like
Imaging may be any means known in the art, including gamma camera and SPECT imaging Imaging may commence immediately after administration, and may include time course radiographic studies, and imaging may continue so long as images may be obtained The MC1-R specific metallopeptides of this invention may be used as melanoma specific tumor imaging and staging agent These uses include early detection and localization of primary and disseminated lesions, identification of lymph nodes containing lesions, radioimmunoguided surgery applications and the like Tumor imaging using a 99mTc-labeled metallopeptide of this invention selective for the MC1-R will further help in formulating the optimal clinical treatment modality, whether surgical, radiation or chemotherapeutic
Chemoprevention Applications In another embodiment, metallopeptides of this invention that are MC1-R specific can be used as chemoprevention agents against sun-induced, such as by UV radiation, neoplastic activity in human skin MC1-R agonist metallopeptides of this invention may be employed to stimulate epidermal melanocytes to produce melanin as well as to convert pheomelanin to eumelanin Eumelanin, which is dark brown or black pigmentation, is considered more photo- protective than pheomelanin, which is yellow or red pigmentation
In general, darker skinned individuals have lower incidences of skin cancer than lighter skinned people The dark pigment eumelanin, a brown/black pigment incorporating dopa-based structural units, is the mam photoprotective agent in skin Lighter colored people have higher levels of pheomelanin, a red/yellow pigment having predominantly cysteine and related sulfur-based structural units, which is an inefficient UV absorber The process of melanogenesis is believed to involve stimulation of MC1-R in epidermal melanocytes, thereby mediating the stimulation of tyrosmase enzymes within these pigment cells, inducing the conversion of tyrosine to dopa and then through dopaqumone to eumelanin Sun tanning due to direct sun exposure is also proposed to result from the same pathway by local production of melanotropic peptide from a POMC gene in the epidermis Thus stimulation of eumelanin production and conversion of pheomelanin to eumelanin may be a desirable chemoprevention modality in blocking sun, or UV, induced neoplastic activity in skin
A potent, high-affinity and highly selective MC1-R agonist metallopeptide of this invention can accordingly be used as a therapeutic chemoprevention agent for combating harmful sun, or UV, exposure that induces neoplastic activity in skin melanocytes
Particularly for individuals previously diagnosed with melanoma or diagnosed as highly susceptible to melanoma, avoidance of any significant UV exposure is medically necessary Currently, both physical screens, such as hats, long sleeves and so on, and various sun- or UV-protectmg creams and formulations are utilized However, the efficacy, both absolute and as a function of time, of even the best chemical sun block is limited, and physical screens are inappropriate for many activities This results in individuals either receiving unacceptably high UV doses or foregoing normal activities, such as swimming, hiking, skiing, attending sporting events, employment in outdoor settings and so on Eumelanin production through activation of the MC1-R on epidermal melanocytes provides a natural shield against sun (UV) induced mutations and DNA damage than does any chemical sun block Eumelanin is a better UV absorber over a wide range than any commercially available sun- protecting cream or formulation The metallopeptides for this application may be made with non-radioactive isotopes of rhenium, or other metals as specified herein, with metal ion complexation by any means specified herein or known in the art The metallopeptides may be formulated by any means known in the art, including but not limited to tablets, capsules, caplets, suspensions, powders, lyophilized forms and aerosols and may be mixed and formulated with buffers, binders, stabilizers, anti-oxidants and other agents known in the art The metallopeptides may be administered by any systemic or partially systemic means known in the art, including but not limited to intravenous injection, subcutaneous injection, administration through mucous membranes, oral administration, dermal administration, skin patches, aerosols and the like Therapeutic Applications In another embodiment, metallopeptides of this invention that are
MC4-R agonists can be used as a therapeutic agent to modify energy metabolism and feeding behavior, including treatment of pathologic obesity and related conditions Metallopeptides of this invention that are MC4-R antagonists can also be used as a therapeutic agent in eating disorders, such as treatment of anorexia Control centeis for eating and satiety reside in the hypothalamus These responses are determined by diverse hormones and soluble factors that signal through specific receptors in the hypothalamus MC4-R is known to be expressed in the brain, and mactivation of this receptor by gene targeting has resulted in mice with the maturity-onset obesity syndrome that is associated with hyperphagia, hypeπnsuhnemia and hyperglycemia In yet another embodiment, metallopeptides of this invention may used as therapeutic agents for treatment of sexual dysfunction, including treatment of both male erectile dysfunction and female sexual dysfunction In yet another embodiment, metallopeptides of this invention may be used as therapeutic agents for treatment of inflammation, including specifically MC1-R and MC3-R agonist metallopeptides The metallopeptides for this application may be made with non-radioactive isotopes of rhenium, or other metals as specified herein, with metal ion complexation by any means specified herein or known in the art The metallopeptides may be formulated by any means known in the art, including but not limited to tablets, capsules, caplets, suspensions, powders, lyophilized forms and aerosols and may be mixed and formulated with buffers, binders, stabilizers, anti-oxidants and other agents known in the art The metallopeptides may be administered by any systemic or partially systemic means known in the art, including but not limited to intravenous injection, subcutaneous injection, administration through mucous membranes, oral administration, dermal administration, skin patches, aerosols and the like
The invention is further illustrated by the following non-limiting examples Example 1 DEVELOPMENT OF A PROTOTYPE METALLOPEPTIDE LIBRARY FOR THE
MELANOCORTIN RECEPTOR
The library design was based on the tetrapeptide message sequence, His-Phe-Arg-Trp (6-9 sequence), of α-MSH. This sequence exists as a reverse turn, making it suitable for conversion into a metallopeptide format of this invention. In this approach metallopeptides were designed around a tripeptide N3Sι MBD designed for a rhenium metal ion. The MBD was derivatized to yield the pentapeptide Ac-His-Phe-Arg-Cys-Trp-NH2 as a putative candidate for meianocortin ("MC") receptors. Further refinements in the structure were made in response to other considerations, including the chirality of amino acid side chains, yielding a template structure Ac-His-D-Phe-Arg-Cys-Trp-NH2. The structure of this peptide after binding to rhenium is:
Figure imgf000058_0001
The template structure was used to define a small combinatorial library utilizing split synthesis methodologies. The final template selected for the combinatorial library was Ac-D-His-Xaa-D-Cys- Trp-NH2, where Xaa was D-(2') Naphthylalanine, D-Trp, D-HomoPhe, or D-Phenylglycine. For this library, the peptide resin, Cys(S'Bu)-Trp(Boc)-Resin was split in four equal parts. Each part was reacted with one of the four Xaa types. After coupling, the resin pools were mixed and synthesis continued in a single pool to couple the His residue. The final result was four separate peptides in a single pool, each peptide varying by one amino acid, in the Xaa position.
An SlBu OSPG group was used to protect the SH group during synthesis. After solid-phase assembly of the peptide chain using Fmoc chemistry with acid labile side chain protecting groups, the S'Bu group was split using tributylphosphine. The resulting free SH-containing peptide-resin was treated with the rhenium transfer agent Re(0)CI3(PPh3)2 in the presence of 1 ,8-Diazabicyclo[5,4,0] undec-7-ene as base. The resulting metallopeptide resin was then treated with TFA to cleave it from the resin and de-protect all the side chain protecting groups. The products were analyzed by mass spectrometry. HPLC analysis was performed and individual peaks collected and subjected to mass analysis. The resulting peptides were analyzed by electron spray mass spectrometry, yielding the predicted mass, including the rhenium complexed to the peptide. Example 2 DESIGN AND SYNTHESIS OF MELANOCORTIN RECEPTOR-SPECIFIC
METALLOPEPTIDE LIBRARY
The library was rationally designed based upon data relating to meianocortin receptors and peptide sequences specific to the meianocortin receptors, including melanotropin side-chain pharmacophores, D-Phe7 and Trp9, that interact with a hydrophobic network of receptor aromatic residues in transmembrane regions 4, 5, 6, and 7. Based on this design criterions, a pharmacophore for the meianocortin receptor was preliminarily defined, and a combinatorial library designed for identification of potent and receptor-selective agonists.
Based on the design criteria, the putative structure R-Aaa-Baa-L-Cys-Caa-NH2was selected, in which each of Aaa, Baa and Caa are selected from L- or D-isomers of 2-Nal (1 ), Phe (2), Trp (3), Tyr (4) and Ala (5), so that any one of the foregoing can be substituted for any one of Aaa, Baa or Caa. In the nomenclature adopted for the library design, the five amino acids were designated 1 through 5, with the isomerism conventionally notated, so that, for example, Baa2L refers to L-Phe in the Baa position.
The terminal R group was selected from Ac, C6H5OOH, CH3(CH2)5-COOH, C6H5CH=CH-COOH (trans) and Pyridine-3-carboxylate. The terminal R group represents a truncated amino acid, and offers additional structural diversity.
A pool and split library synthesis scheme was employed such that 5,000 separate compounds were synthesized, resulting in 200 final pools each containing 25 different compounds, with the compounds differing solely by the amino acids in the Aaa and Baa position. Using this methodology, binding characteristics relating to the Caa amino acid or R terminal group can be identified through inter-group comparison, thereby simplifying the deconvolution strategy.
The library synthesis steps are set forth in Fig. 8. The resin of step 1 was divided into 10 groups. At step 2 each of Caa^ through Caa5D were coupled to an individual resin group, and L-Cys was coupled to each resin group, resulting in 10 groups and 20 couplings. Each of the resin groups of step 2 was then divided into 10 sub-groups as shown at step 3 (with only one subgroup illustrated at step 3, and for each subgroup of step 3, each of BaaiL through Baa5D were coupled to one group within the subgroup, resulting in 100 groups in 10 subgroups and 100 couplings. For each subgroup of step 3, the five BaaxL members and the five BaaxD members were separately pooled in step 4, resulting in 20 subgroups, with each subgroup containing five different sequences differing by the Baax member. Each of the 20 subgroups of step 4 were then in step 5 divided into 10 groups (with only one shown for illustration purposes in Fig. 8), and for each subgroup, each of Aaa^ through Aaa5D were coupled to one group within the subgroup, resulting in 200 groups in 20 subgroups and 200 couplings. For each subgroup of step 5, the five AaaxL members and the five AaaxD members were separately pooled in step 6, resulting in 40 subgroups, with each subgroup containing twenty-five different sequences differing by the Baax and Aaax member. In step 7, each of the 40 subgroups of step 6 were divided into five groups, and each of R, through R5 were coupled to one group within the subgroup, resulting in 200 groups in 40 subgroups, with each group containing 25 different sequences differing by the Baax and Aaax member.
Peptides were synthesized using Fmoc chemistry, with side chain functionalities protected using acid labile groups. The SH group of the Cys residue was protected by a S'Bu OSPG cleavable in presence of both base and acid labile groups using tributylphosphine as the reducing agent. The peptide chain was assembled on the solid phase using 1-(1 H-benzotriazole-1-yl)-1 ,1 ,3,3,-tetra- methyluronium tetrafluoroborate (TBTU) as a coupling agent. The SH group was then selectively unprotected and rhenium metal ion complexed using the rhenium transfer agent Re(0)CI3(PPh3)2 in the presence of 1 ,8-Dιazabιcyclo[5,4,0]undec-7-ene (DBU) as base. In this manner, the metal-peptide complex was formed with the peptide chain still tethered to the solid support. The metallopeptide was then liberated from the solid support by treatment with TFA. This solid phase approach to metal ion complexation is fully compatible with split synthesis methodologies employed in combinatorial libraries. The synthesis process was performed using commercial automated synthesizers. Multiple manual synthesizers (such as those commercially available from SynPep Corporation, Dublin, CA) allow parallel synthesis of ten peptides simultaneously.
Quality control protocols were employed as required, and include HPLC, mass spectral analysis, and ammo acid analysis on each individual pool of 25 compounds. The presence of each of pool constituent is established by molecular ion mass spectral analysis. Negative ion mode electron spray (ES) and matrix-assisted laser desorption (MALDI) techniques were employed. Using mass spectral analysis, three different measures were made: (a) the presence of up to 25 individual compounds by molecular ion peak measurement (assuming different masses for each compound), (b) confirmation that the molecular ion peaks show complexation to a rhenium metal ion, and (c) absence of peaks with molecular masses corresponding to peptides uncomplexed with metal ion Rhenium is a mixture of two isotopes that differ in mass by 2 units (186 and 188) with a relative abundance of these isotopes of 1 :2 The molecular ion profile of a metallopeptide appears as two peaks that differ by 2 mass units with integrated area ratios of 1 2. Rhenium thus acts as an internal mass spectral reference for these metallopeptides. A spectral analysis of one such pool of 25 compounds synthesized by the methods of this claim is shown at Fig. 9. Five sets of two metallopeptides in this pool have similar masses due to the presence of the same am o acids assembled in different sequences. The relative intensities of the peaks is due to differential lonization of individual compounds in the pool and does not reflect the relative amounts in the mixture. Each pair of peaks with mass unit differences of 2 and relative ratios of 1 2 are due to the relative abundance of two stable isotopes of rhenium (Re-185 and Re-187) The spectral analysis did not reveal any free uncomplexed linear peptides, which would be approximately 197 to 199 mass units less than the corresponding metallopeptide, due to the absence of the rhenium-oxo core.
Ammo acid analysis of each pool of 25 metallopeptides was also employed, and was used to determine the relative equimolar ratio of each of 25 compounds in a pool The synthetic protocols of split synthesis were designed to assure equimolar amounts of pool constituents.
Example 3 SCREENING OF MELANOCORTIN RECEPTOR-SPECIFIC LIBRARY
Metallopeptide library pools are screened for MC4-R receptor and MC1-R receptor binding activity in high throughput screening assays. The MC receptor-b dmg assay uses membrane preparations from B16-F1 or B16-F10 melanoma cells as the source of MC receptor. Cell membranes prepared from MC4-R-expressιng 293 cells and negative control, untransfected 293 cells, are substituted for B16-F1 or B16-F10 melanoma cell membranes in MC4-R specific binding assays. The MC receptor-b dmg assays use the Mil pore Multi-Screen System and are performed in 96-well Millipore filter plates (Durapore, 0.45 mm porosity) pre-blocked with 0.5% bovine serum albumin in phosphate buffered saline. Cell membrane preparations (12.5 μg/well) are incubated with 0.4 nM 125I-NDP-MSH in HEPES Buffer containing 0.2% bovine serum albumin. Non-specific binding is determined by addition of l O^M α-MSH or 10"7M NDP-MSH. Metallopeptides to be tested are added to reaction wells at a final concentration of 1 mM. After incubation for 90 minutes at room temperature, the binding reaction is rapidly terminated by filtration to capture the membranes. Filters are washed 3 times with ice-cold PBS and air-dried. Individual filters are then punched from the plates and distributed into gamma counter tubes. Radioactivity associated with the membranes is determined in a Packard Cobra gamma counter. Specific binding is determined as the radioactivity in wells containing 125I-NDP-MSH alone minus the radioactivity in wells containing lO^M α-MSH. Test compounds are screened in duplicate wells and are considered to be active where 1 μM concentrations inhibit >50% of the specific binding. Standard curves of unlabeled NDP-MSH will be included on each plate as an internal assay control.
A commercially available cAMP kit (R&D Systems, DE0350, low pH) is employed to evaluate agonist potential of metallopeptides that bind to MC4-R. 293 cells stably transfected with hMC-4 receptor, or B16-F1 melanoma cells, are grown to confluence in 96-well dishes. Ceils are washed and fresh RPM I containing 0.2 mM isobutylmethylxanthine (cAMP phosphodiesterase) and varying concentrations of metallopeptides, or α-MSH as a positive control, are added, and the cells are incubated for 1 hour at 37°C. Medium is aspirated, and cell layers extracted with 150 μl of 0.1 M HCL Total cAMP accumulation in 100 μl of cell extract is quantitated in 96-well plates by competitive immunoassay with the cAMP kit, using an acetylation modification. EC50 values for test compounds will be calculated based on cAMP accumulation in cells treated with lO^M α-MSH. The capabilities of both of these cell types to accumulate cAMP in the presence of α-MSH and MSH analog peptides are documented in the scientific literature; see, for example, Oilman MM et al: Science 278:135-138, 1997.
Example 4 DECONVOLUTION OF MELANOCORTIN RECEPTOR-SPECIFIC LIBRARY Deconvolution of a positive pool is done by iterative re-synthesis and screening deconvolution approaches. The individual 25 constituents are synthesized separately, or alternatively in 5 smaller pools of 5 compounds each, with each pool screened in receptor binding assays. The latter approach is preferred where there is a high hit frequency in the preliminary screen. The compounds in pools with the best results (closest to receptor affinity in the nanomolar range and MC4-R to MC1-R selectivity of at least 100) are individually synthesized and screened.
Example 5 ALTERNATIVE METHOD OF DECONVOLUTION OF MELANOCORTIN RECEPTOR-SPECIFIC LIBRARY
In this example, an alternative method of mass spectral deconvolution of metallopeptide libraries is employed. The method is based on the internal signature of rhenium-complexed peptides (two isotopic peaks in 1 :2 ratios differing by 2 mass units), which generally permits metallopeptide identification even in mixed solutions. A positive pool is incubated with receptor-bearing cells, the excess unbound compounds washed away under controlled conditions, and the cells treated with a solvent to disrupt metallopeptide binding and extract the metallopeptide in the solvent. Mass spectral analysis of the solvent reveals the metallopeptide or metallopeptides which are bound to the receptor-bearing cells, and through comparison to the quality control data it is possible to ascertain the specific metallopeptide or metallopeptides which are bound. This process provides high throughput of metallopeptide library screening. Example 6 SINGLE POT SYNTHESIS OF A LIBRARY OF FOUR METALLOPEPTIDES OF
THE GENERAL STRUCTURE Ac-His-Xaa-Cys-Trp-NH2
A synthesis procedure similar to that described in Example 1 was used in making this library. A NovaSyn TGR resin for making peptide amides (substitution 0.2 mM/gm) was used. Fmoc synthetic strategy was employed using the following protected amino acids: Fmoc-Trp(Boc), Fmoc-Cys(S'Bu), Fmoc-Xxx, and Fmoc-His(Trityl). The Xaa amino acids were Trp, HomoPhe, 2'-Naphthylalanine, and Phenylglycine. The peptide resin Cys(SlBu)-Trp-NH2 was split into four equal pools and one of the Xaa amino acids was coupled to one individual pool. After completion of the coupling reaction, the four resin pools were mixed again. The synthesis proceeded with the coupling of His followed by acetylation of the N-terminus. After the complete assembly of the peptide chain Ac-His(Trt)-Xaa- Cys(SlBu)-Trp(Boc)-NH2, the S'Bu group was removed by treatment with DMF/tributyiphosphine and rhenium-oxo metal ion was complexed as generally described above. The fully protected metallopeptide was deblocked and liberated from the solid support by treatment with a cleavage cocktail (95:5 mixture of trifluoroacetic acid - triisopropylsilane) for three hours. The metallopeptide library was recovered by precipitation using cold ether. The resulting pellet was washed twice and 0.5 ml of 95% acetic acid was added. After one-half hour 5 ml of water was added and the solution was freeze-dried yielding the desired library in solid form. Mass spectrometric analysis of the library pool confirmed the correct masses for all four members of the library:
TABLE 3
Figure imgf000062_0001
As noted in TABLE 3, two molecular ion peaks differing in mass units of 2 were calculated and observed for each structure; this difference is presumptively due to the presence of two natural isotopes of rhenium, Re-185 and Re-187, in the complexation step. In addition, the area under the observed peaks in the spectrometric analysis showed that for each structure the area was in a 1 :2 ratio, which is identical to and presumptively related to the relative abundance of Re-185 and Re-187 isotopes. These results confirmed the complexation of rhenium to the peptides. The spectral analysis is shown at Fig. 10
These results were also confirmed by HPLC analysis of this library of four compounds, which results were compared to HPLC analysis of each of the four individual members performed under identical HPLC conditions As is evident from Fig. 11, each of the four member components are present in the library mixture In the HPLC profile each of the metallopeptide has resolved into two isomers due to alternate orientations (syn and anti) of the rhenium oxo core The HPLC analysis also revealed the lack of uncomplexed linear peptides in the preparation All four compounds used for this comparison were individually prepared using methods identical to that described above for synthesis of the library The HPLC profiles are shown as Figs. 11 A to 11E Example 7 SYNTHESIS OF MC1-R SPECIFIC METALLOPEPTIDES FOR USE AS
CHEMOPREVENTION AGENT
High potency metallopeptides are also provided with N-termmal modifications Systematic N- terminal modifications are made based upon the limited data available in the literature related to receptor-bmdmg affinities of peptide analogs for various MC receptor types In general, these studies indicate that the Hιs6 residue may be a critical factor in determining receptor selectivity for MC1-R (peripheral) versus MC4-R (brain) Three-dimensional molecular models of the human meianocortin receptor have been developed based upon the electron cryo-microscopic structure of bactenorhodopsin and the electron density footprint of bovine rhodopsm By modeling known potent agonists into the proposed binding sites, specific ligand-receptor interactions have been identified. By this means, researchers have tentatively identified melanotropin side-chain pharmacophores, D-Phe7 and Trp9, and have proposed that these interact with a hydrophobic network of receptor aromatic residues in transmembrane regions 4, 5, 6, and 7 The findings of these results are utilized in selecting N-terminal modifications for the metallopeptide core Groups with hydrophobic and/or hydrogen bonding potential are investigated in a systematic and stereospecific manner, with contemporaneous assaying of potency and MC1 -R specificity of the resulting metallopeptides The influence of the His residue on bioactivity is also investigated Two series of metallopeptides are synthesized
Rheniumoxo - [R-Hιs-D-Phe-Arg-Cys-Trp-NH2] and Rheniumoxo - [R-D-Phe-Arg-Cys-Trp-NH2] Where R is a pair consisting of a hydrophobic side chain and hydrophilc side chain with hydrogen bonding potential which is selected from the following groups
Ser, HSer, HO-(CH2)n-CO-,
H2N-(CH2)n-CO-, HOOC-(CH2)n-CO-, CH3-(CH2)n-CO-,
Figure imgf000063_0001
And where n is from 2 to 9 and X and/or Y are selected from H, OH, CI, Br, I, NH2, OCH3, N02 and similar groups.
Example 8 SKIN DARKENING IN ANOLIS CAROLINENSIS PT-1145 complexed with rhenium (0.65 mg taken in a 50 mL vehicle) was injected intraperitoneally in a lizard (Anolis carolinensis) that was pre-conditioned for a skin darkening experiment. The pre-conditioning involved leaving the lizards in a well-lit white background for 24 hours. Within 10-15 minutes after injection, the skin coat color turned from bright green to dark brown to black. The skin coat color remained dark during the five-hour observation period. Lizards injected with the vehicle alone (PBS buffer containing 1 % each of DMF and beta-cyclodextran) did not show any change in their skin color during the 5-hour observation period.
Each of the foregoing is merely illustrative, and other equivalent embodiments are possible and contemplated.
Although this invention has been described with reference to these preferred embodiments, other embodiments can achieve the same results. Variations and modifications of the present invention will be obvious to those skilled in the art and it is intended to cover in the appended claims all such modifications and equivalents. The entire disclosures of all applications, patents, and publications cited above are hereby incorporated by reference.
The preceding examples can be repeated with similar success by substituting the gener ically or specifically described reactants and/or operating conditions of this invention for those used in the preceding examples.

Claims

CLAIMSWhat is claimed is:
1. A construct comprising a metal ion-binding domain comprising two or more linked residues forming an 3S^ ligand available for complexing with a metal ion, wherein the construct is conformationally constrained in a structure specific for one or more meianocortin receptors upon complexing the metal ion-binding domain with a metal ion.
2. A manufactured peptide and pharmaceutically acceptable salts thereof comprising a metal ion-binding domain comprising two or more contiguous amino acids and a determined biological- function domain specific for one or more meianocortin receptors, wherein at least a portion of said biological-function domain is co-extensive with at least a portion of the metal ion-binding domain, and wherein said biological-function domain is conformationally constrained upon complexing the metal ion-binding domain with a metal ion.
3. A combinatorial library targeted to meianocortin receptors of different sequence peptide members synthesized on solid phase, where each constituent library member comprises: (a) a peptide sequence of three or more amino acid residues bound to solid phase characterized by (i) a sequence of two or more amino acid residues forming a metal ion-binding domain and including at least one amino acid residue containing at least one S wherein the said S is protected by an orthogonal S-protecting group, (ii) a sequence of one or more amino acid residues at the N- or C- terminus of the metal ion-binding domain, or at both the N- and C-terminus of the metal ion-binding domain, and (iii) a cleavable bond attaching the peptide sequence to solid phase; and
(b) a unique selection or sequence of amino acid residues in the peptide sequence of at least one of the constituent members of the library; wherein the orthogonal S-protecting group may be removed without cleaving the peptide sequence from the solid phase.
4. A combinatorial library targeted to meianocortin receptors of different sequence peptidomimetic members synthesized on solid phase, where each constituent library member comprises:
(a) a peptidomimetic sequence of a combination of three or more amino acid residues and mimics of amino acid residues bound to solid phase characterized by (i) a sequence of two or more amino acid residues, mimics of amino acid residues or combinations thereof forming a metal ion- binding domain and including at least one amino acid residue or mimic of an amino acid residue containing at least one S wherein the said S is protected by an orthogonal S-protecting group, (ii) a sequence of one or more amino acid residues, mimics of amino acid residues or combinations thereof at the N- or C- terminus of the metal ion-binding domain, or at both the N- and C-terminus of the metal ion-binding domain, and (iii) a cleavable bond attaching the peptidomimetic sequence to solid phase; and (b) a unique selection or sequence of amino acid residues, mimics of amino acid residues or combinations thereof in the peptidomimetic sequence of at least one of the constituent members of the library; wherein the orthogonal S-protecting group may be removed without cleaving the peptidomimetic sequence from the solid phase.
5. A combinatorial library targeted to meianocortin receptors of different sequence peptide or peptidomimetic members synthesized in solution, where each constituent library member comprises:
(a) a peptidomimetic sequence of a combination of three or more amino acid residues and mimics of amino acid residues bound to solid phase characterized by (i) a sequence of two or more amino acid residues, mimics of amino acid residues or combinations thereof forming a metal ion- binding domain and including at least one amino acid residue or mimic of an amino acid residue containing at least one S wherein the said S is protected by an orthogonal S-protecting group, (ii) a sequence of one or more amino acid residues, mimics of amino acid residues or combinations thereof at the N- or C- terminus of the metal ion-binding domain, or at both the N- and C-terminus of the metal ion-binding domain; and
(b) a unique selection or sequence of amino acid residues, mimics of amino acid residues or combinations thereof in the peptidomimetic sequence of at least one of the constituent members of the library.
6. The composition of claims 1 or 2 of the formulas:
R, - Lll - Aaa - Bbb - Ccc - R2,
R1 - Bbb - Aaa - Ccc - R2,
R1 _ Ddd - Bbb - Aaa - R3,
R4- Eee - Bbb - Ccc - R2, Ri - Fff - Aaa - Ggg - Ccc - R5,
R, - Hhh - Aaa - Bbb - Ccc - R5, or
Ri - Iii - Iii - Ccc - Jjj - Kkk - R2, wherein
Ri is any functionality that potentiates the intrinsic activity of the remainder of the molecule, including but not limited to providing an auxiliary or secondary receptor contact. Any of a variety of amino acids and non-peptide groups may be employed, including an amino acid chain from one to about four neutral or charged L- or D-configuration amino acid residues. If R, is a non- peptide group, it may be a linear or branched alkyl, aryl, alkene, alkenyl or aralkyl chain; Aaa is an L- or D-configuration cationic amino acid with a positively charged side chain. Preferred amino acids include L-configuration Lys, Arg, Orn, Dpr or Dbu, and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids. Aaa provides an N (nitrogen atom) for metal ion complexation; Bbb is an L- or D-configuration amino acid with an aromatic side chain. Preferred amino acids include D-configuration Phe, Phe(4*CI), Phe(3',4' Di-CI), Phe(4'-nitro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl), or Tyr(BzlCI2), and derivatives, analogs or homologs thereof. The aromatic ring in Bbb may be functionalized with halogen, alkyl or aryl groups. Bbb provides an N for metal ion complexation; Ccc is an amino acid that provides both an N, from the alpha amino group, and an S (sulfur atom), from a side chain group, for metal ion complexation. Preferred amino acids include L- or D- configuration Cys, Pen and Hcys;
Lll is a D-configuration amino acid with an aromatic side chain. Preferred amino acids include D- configuration Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nitro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl), or
Tyr(BzlCI2), and derivatives, analogs or homologs thereof. The aromatic ring in Lll may be functionalized with halogen, alkyl or aryl groups. Lll does not provide an N for metal ion complexation;
R2 is an amino acid with an aromatic side chain. Preferred amino acids include L- or D-configuration Phe, Trp, Phe(4'CI), Phe(3',4' Di-CI), Phe(4"-nitro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl,
Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl) or Tyr(BzlCI2), and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids. The C-terminus may be free or amidated. R2 may also be the corresponding des-carboxyl amino acid of any of the foregoing. Alternatively, R2 may be eliminated; Ddd is an amino acid that provides an S, from a side chain group, for metal ion complexation. Preferred amino acids include L- or D-configuration Cys, Pen and Hcys;
R3 is an amino acid with an aromatic side chain that provides an N for metal ion complexation. Preferred amino acids include L- or D-configuration Phe, Trp, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nitro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzi), Cys(Bzl) or Tyr(BzlCI2), and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids. The C-terminus may be free or amidated. R3 may also be the corresponding des-carboxyl amino acid of any of the foregoing;
R is a functionality that provides a cationic center. Preferred amino acids include L- or D- configuration Lys, Arg, Orn, Dpr or Dbu, and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids. The N-terminus of the amino acid may be functionalized with any of a variety of neutral amino acid and non-peptide groups, including linear or branched alkyl, aryl, alkene, alkenyl or aralkyl chains; Eee is an uncharged L- or D-configuration amino acid that provides an N for metal ion complexation. Preferred amino acids include Gly and L-configuration Ala, Nle, Leu, Val, Phe or Trp, and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids. In a preferred embodiment, Eee isn an amino acid with an aliphatic side chain; Fff is an L- or D-configuration aromatic amino acid. Preferred amino acids include D-configuration
Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nitro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl), Tyr(BzlCI2), Tic, Tiq or Tea, and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids. The aromatic ring in Fff may be substituted with halogen, alkyl or aryl groups. Fff does not provide an N for metal ion complexation;
Ggg is an L- or D-configuration aromatic amino acid. Preferred amino acids include L-configuration Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nitro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl) or Tyr(BzlCI2), and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids. The aromatic ring in Ggg may be substituted with halogen, alkyl or aryl groups. Ggg provides an N for metal ion complexation;
R5 is preferably an amide, substituted amide, ester or carboxylate group. R5 may also be and L- or D- configuration amino acid or amino acid amide, including an aromatic, aliphatic, neutral or charged amino acid; Hhh is an L- or D-configuration cationic amino acid with a positively charged side chain. Preferred amino acids include L-configuration Lys, Arg, Orn, Dpr or Dbu, and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids. Hhh does not provide an N for metal ion complexation;
Iii is an L- or D-configuration amino acid that provides an N for metal ion complexation. Preferred amino acids includes Ala, Gly, Nle, Val. Leu, He, His, Lys, or Arg, and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids;
Jjj is an L- or D-configuration amino acid with an aromatic side chain. Preferred amino acids include D-configuration Phe, Phe(4'CI), Phe(3',4' Di-CI), Phe(4'-nitro), Phe(4'-methyl), Phe(4'-Phenyl), Hphe, Pgl, Trp, 1-Nal, 2-Nal, Ser(Bzl), Lys(Z), Lys(Z-2'Br), Lys(Bz), Thr(Bzl), Cys(Bzl), or Tyr(BzlCI2), and derivatives, analogs or homologs thereof. The aromatic ring in Jjj may be functionalized with halogens, alkyl or aryl groups. Jjj does not provide an N for metal ion complexation; and
Kkk is an L- or D-configuration cationic amino acid with a positively charged side chain. Preferred amino acids include L-configuration Lys, Arg, Orn, Dpr or Dbu, and derivatives, analogs or homologs thereof, including both natural and synthetic amino acids. Aaa does not provide an N for metal ion complexation.
7. The composition of claim 1 or 2 wherein the metal ion-binding domain is complexed with a metal ion.
8. The composition of claim 1 or 2, wherein the composition is substantially more specific for one or more meianocortin receptors when the metal ion-binding domain is complexed with a metal ion than is the composition when the metal ion-binding amino acid sequence is not complexed with a metal ion.
9. The combinatorial library of claim 3, 4 or 5 wherein the metal ion-binding domain further comprises at least one N available for binding to a metal ion upon removal of the orthogonal S- protecting group.
10. The combinatorial library of claim 3, 4 or 5 wherein the metal ion-binding domain comprises three residues forming an N^ ligand.
11. The combinatorial library of claim 3, 4 or 5 wherein the orthogonal S-protecting group is S-thio-butyl, acetamidomethyl, 4-methoxytrityl, S-sulfonate or 3-nitro-2-pyridinesulfenyl.
12. The combinatorial library of claim 3, 4 or 5 wherein the orthogonal S-protecting group may be removed from constituent library members thereof without otherwise altering the constituent library members or any amino acid side chain protecting group therein.
13. The combinatorial library of claim 3, 4 or 5 wherein the structural diversity occurs in the metal ion-binding domain.
14. The combinatorial library of claim 3, 4 or 5 wherein the structural diversity occurs outside the metal ion-binding domain.
15. The combinatorial library of claim 3, 4 or 5 wherein one or more constituent library members include at least one amino acid residue or mimic of an amino acid residue in the sequence at the N- or C-terminus of the metal ion-binding domain containing at least one S wherein the said S is protected by a non-orthogonal S-protecting group, whereby the orthogonal S-protecting group may be removed without removing the non-orthogonal S-protecting group.
16. The solid phase combinatorial library of claim 3 wherein the at least one amino acid residue containing at least one S wherein the said S is protected by an orthogonal S-protecting group is an L- or D-3-mercapto amino acid, including but not limited to L- or D-cysteine or L- or D- penicillamine.
17. The combinatorial library of claim 4 or 5 wherein the at least one amino acid residue or mimic of an amino acid residue containing at least one S wherein the said S is protected by an orthogonal S-protecting group is an L- or D-3-mercapto amino acid, including but not limited to L- or D- cysteine or L- or D-penicillamine; 3-mercapto phenylananine; 2-mercaptoacetic acid; 3- mercaptopropionic acid; 2-mercaptopropionic acid; 3-mercapto-3,3,-dimethyl propionic acid; 3- mercapto-3,3,-diethyl proprionic acid; 3-mercapto,3-methyl propionic acid; 2-mercapto,2-methyl acetic acid; 3-cyclopentamethiene,3-mercaptopropionic acid; or 2-cyclopentamethlene,2-mercaptoacetic acid.
PCT/US2000/016396 1999-08-12 2000-06-15 Melanocortin metallopeptide constructs, combinatorial libraries and applications WO2001013112A1 (en)

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JP2001517163A JP2004519410A (en) 1999-08-12 2000-06-15 Melanocortin metallopeptide constructs, random sequence libraries and methods of application
EP00944681A EP1208377A4 (en) 1999-08-12 2000-06-15 Melanocortin metallopeptide constructs, combinatorial libraries and applications
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WO2001050127A3 (en) * 1999-12-30 2002-01-31 7Tm Pharma Screening using biological target molecules with metal-ion binding sites
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WO2003055477A1 (en) * 2001-12-21 2003-07-10 7Tm Pharma A/S Method for the treatment of mc receptor related disorders with a chelate and/or a chelator
US7323462B2 (en) 2002-12-10 2008-01-29 Pfizer Inc. Morpholine dopamine agonists
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WO2006094725A1 (en) * 2005-03-10 2006-09-14 Bayer Schering Pharma Aktiengesellschaft Chelators for radioactively labeled conjugates comprising a stabilizing sidechain
EP1700608A1 (en) * 2005-03-10 2006-09-13 Schering AG Chelators for radioactively labeled conjugates comprising a stabilizing sidechain
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US7754691B1 (en) 2005-07-07 2010-07-13 Palatin Technologies, Inc. Linear melanocortin receptor-specific peptides for cachexia
WO2013067309A1 (en) 2011-11-04 2013-05-10 Xion Pharmaceutical Corporation Methods and compositions for oral administration of melanocortin receptor agonist compounds
US10058823B2 (en) 2013-06-03 2018-08-28 Basf Se Membranes

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AU5874200A (en) 2001-03-13

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