WO2000055364A3 - Genetic analysis - Google Patents
Genetic analysis Download PDFInfo
- Publication number
- WO2000055364A3 WO2000055364A3 PCT/GB2000/000916 GB0000916W WO0055364A3 WO 2000055364 A3 WO2000055364 A3 WO 2000055364A3 GB 0000916 W GB0000916 W GB 0000916W WO 0055364 A3 WO0055364 A3 WO 0055364A3
- Authority
- WO
- WIPO (PCT)
- Prior art keywords
- depletion
- population
- inter
- perfectly matched
- matched duplex
- Prior art date
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6827—Hybridisation assays for detection of mutation or polymorphism
- C12Q1/683—Hybridisation assays for detection of mutation or polymorphism involving restriction enzymes, e.g. restriction fragment length polymorphism [RFLP]
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6834—Enzymatic or biochemical coupling of nucleic acids to a solid phase
- C12Q1/6837—Enzymatic or biochemical coupling of nucleic acids to a solid phase using probe arrays or probe chips
Abstract
Priority Applications (4)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
AU31782/00A AU3178200A (en) | 1999-03-12 | 2000-03-10 | Genetic analysis |
EP00909502A EP1173609A2 (en) | 1999-03-12 | 2000-03-10 | Genetic analysis |
CA002362771A CA2362771A1 (en) | 1999-03-12 | 2000-03-10 | Genetic analysis |
JP2000605780A JP2002538837A (en) | 1999-03-12 | 2000-03-10 | Genetic analysis |
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
EP99301933.0 | 1999-03-12 | ||
EP99301933 | 1999-03-12 |
Publications (2)
Publication Number | Publication Date |
---|---|
WO2000055364A2 WO2000055364A2 (en) | 2000-09-21 |
WO2000055364A3 true WO2000055364A3 (en) | 2001-10-11 |
Family
ID=8241266
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
PCT/GB2000/000916 WO2000055364A2 (en) | 1999-03-12 | 2000-03-10 | Genetic analysis |
Country Status (5)
Country | Link |
---|---|
EP (1) | EP1173609A2 (en) |
JP (1) | JP2002538837A (en) |
AU (1) | AU3178200A (en) |
CA (1) | CA2362771A1 (en) |
WO (1) | WO2000055364A2 (en) |
Cited By (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US9206418B2 (en) | 2011-10-19 | 2015-12-08 | Nugen Technologies, Inc. | Compositions and methods for directional nucleic acid amplification and sequencing |
Families Citing this family (11)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US7141371B2 (en) | 2002-09-06 | 2006-11-28 | State Of Oregon Acting By And Through The State Board Of Higher Education On Behalf Of The University Of Oregon | Methods for detecting and localizing DNA mutations by microarray |
DK1885882T3 (en) | 2005-05-10 | 2011-04-11 | State Of Oregon Acting By & Through The State Board Of Higher Eduction On Behalf Of The University O | Methods for mapping polymorphisms and polymorphism microarray |
US20110105364A1 (en) * | 2009-11-02 | 2011-05-05 | Nugen Technologies, Inc. | Compositions and methods for targeted nucleic acid sequence selection and amplification |
SG11201404243WA (en) | 2012-01-26 | 2014-08-28 | Nugen Technologies Inc | Compositions and methods for targeted nucleic acid sequence enrichment and high efficiency library generation |
CA2877094A1 (en) | 2012-06-18 | 2013-12-27 | Nugen Technologies, Inc. | Compositions and methods for negative selection of non-desired nucleic acid sequences |
US20150011396A1 (en) | 2012-07-09 | 2015-01-08 | Benjamin G. Schroeder | Methods for creating directional bisulfite-converted nucleic acid libraries for next generation sequencing |
US9822408B2 (en) | 2013-03-15 | 2017-11-21 | Nugen Technologies, Inc. | Sequential sequencing |
CN105849264B (en) | 2013-11-13 | 2019-09-27 | 纽亘技术公司 | For identifying the composition and method that repeat sequencing reading |
WO2015131107A1 (en) | 2014-02-28 | 2015-09-03 | Nugen Technologies, Inc. | Reduced representation bisulfite sequencing with diversity adaptors |
EP3177740B1 (en) | 2014-08-06 | 2021-01-13 | Nugen Technologies, Inc. | Digital measurements from targeted sequencing |
US11099202B2 (en) | 2017-10-20 | 2021-08-24 | Tecan Genomics, Inc. | Reagent delivery system |
Citations (12)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
EP0226288A2 (en) * | 1985-10-09 | 1987-06-24 | Collaborative Research Inc. | Means and method of testing for cystic fibrosis based on genetic linkage |
US4771384A (en) * | 1986-07-24 | 1988-09-13 | Dnastar, Inc. | System and method for fragmentation mapping |
WO1989001526A1 (en) * | 1987-08-07 | 1989-02-23 | Genelabs Incorporated | Coincidence cloning method and library |
EP0466404A1 (en) * | 1990-07-13 | 1992-01-15 | Life Technologies, Inc. | Size markers for electrophoretic analysis of DNA |
WO1993017126A1 (en) * | 1992-02-19 | 1993-09-02 | The Public Health Research Institute Of The City Of New York, Inc. | Novel oligonucleotide arrays and their use for sorting, isolating, sequencing, and manipulating nucleic acids |
WO1994011383A1 (en) * | 1992-11-12 | 1994-05-26 | Cold Spring Harbor Laboratory | A representational approach to dna analysis |
US5376526A (en) * | 1992-05-06 | 1994-12-27 | The Board Of Trustees Of The Leland Stanford Junior University | Genomic mismatch scanning |
WO1995011971A1 (en) * | 1993-10-28 | 1995-05-04 | Life Technologies, Inc. | Nucleic acid marker ladder for estimating mass |
WO1995012688A1 (en) * | 1993-01-11 | 1995-05-11 | United States Biochemical Corporation | Methods of analysis and manipulation of dna utilizing mismatch repair systems |
WO1997029211A1 (en) * | 1996-02-09 | 1997-08-14 | The Government Of The United States Of America, Represented By The Secretary, Department Of Health And Human Services | RESTRICTION DISPLAY (RD-PCR) OF DIFFERENTIALLY EXPRESSED mRNAs |
US5710000A (en) * | 1994-09-16 | 1998-01-20 | Affymetrix, Inc. | Capturing sequences adjacent to Type-IIs restriction sites for genomic library mapping |
US5750335A (en) * | 1992-04-24 | 1998-05-12 | Massachusetts Institute Of Technology | Screening for genetic variation |
-
2000
- 2000-03-10 WO PCT/GB2000/000916 patent/WO2000055364A2/en not_active Application Discontinuation
- 2000-03-10 JP JP2000605780A patent/JP2002538837A/en active Pending
- 2000-03-10 EP EP00909502A patent/EP1173609A2/en not_active Withdrawn
- 2000-03-10 CA CA002362771A patent/CA2362771A1/en not_active Abandoned
- 2000-03-10 AU AU31782/00A patent/AU3178200A/en not_active Abandoned
Patent Citations (12)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
EP0226288A2 (en) * | 1985-10-09 | 1987-06-24 | Collaborative Research Inc. | Means and method of testing for cystic fibrosis based on genetic linkage |
US4771384A (en) * | 1986-07-24 | 1988-09-13 | Dnastar, Inc. | System and method for fragmentation mapping |
WO1989001526A1 (en) * | 1987-08-07 | 1989-02-23 | Genelabs Incorporated | Coincidence cloning method and library |
EP0466404A1 (en) * | 1990-07-13 | 1992-01-15 | Life Technologies, Inc. | Size markers for electrophoretic analysis of DNA |
WO1993017126A1 (en) * | 1992-02-19 | 1993-09-02 | The Public Health Research Institute Of The City Of New York, Inc. | Novel oligonucleotide arrays and their use for sorting, isolating, sequencing, and manipulating nucleic acids |
US5750335A (en) * | 1992-04-24 | 1998-05-12 | Massachusetts Institute Of Technology | Screening for genetic variation |
US5376526A (en) * | 1992-05-06 | 1994-12-27 | The Board Of Trustees Of The Leland Stanford Junior University | Genomic mismatch scanning |
WO1994011383A1 (en) * | 1992-11-12 | 1994-05-26 | Cold Spring Harbor Laboratory | A representational approach to dna analysis |
WO1995012688A1 (en) * | 1993-01-11 | 1995-05-11 | United States Biochemical Corporation | Methods of analysis and manipulation of dna utilizing mismatch repair systems |
WO1995011971A1 (en) * | 1993-10-28 | 1995-05-04 | Life Technologies, Inc. | Nucleic acid marker ladder for estimating mass |
US5710000A (en) * | 1994-09-16 | 1998-01-20 | Affymetrix, Inc. | Capturing sequences adjacent to Type-IIs restriction sites for genomic library mapping |
WO1997029211A1 (en) * | 1996-02-09 | 1997-08-14 | The Government Of The United States Of America, Represented By The Secretary, Department Of Health And Human Services | RESTRICTION DISPLAY (RD-PCR) OF DIFFERENTIALLY EXPRESSED mRNAs |
Non-Patent Citations (7)
Title |
---|
ELLIS L A ET AL: "MUTS BINDING PROTECTS HETERODUPLEX DNA FROM EXONUCLEASE DIGESTION IN VITRO: A SIMPLE METHOD FOR DETECTING MUTATIONS", NUCLEIC ACIDS RESEARCH, vol. 22, no. 13, 11 July 1994 (1994-07-11), pages 2710/2711, XP002021164 * |
ESPOSITO J J AND KNIGHT J C: "Orthopoxvirus DNA: A comparison of restriction profiles and maps", VIROLOGY, vol. 143, 1985, pages 230 - 251, XP000951520 * |
KNEHR M ET AL.: "Isolation and characterization of a cDNA encoding rat liver cytosolic epoxide hydrolase and its functional expression in Escherichia coli", THE JOURNAL OF BIOLOGICAL CHEMISTRY, vol. 268, no. 23, 1993, pages 17623 - 17627, XP002165725 * |
KOROLIK V ET AL.: "Differentiation of Campylobacter jejuni and Campylobacter coli strains by using restriction endonuclease DNA profiles and DNA fragment polymorphisms", JOURNAL OF CLINICAL MICROBIOLOGY, vol. 33, no. 5, 1995, pages 1136 - 1140, XP000951519 * |
MASATO ORITA ET AL: "DETECTION OF POLYMORPHISMS OF HUMAN DNA BY GEL ELECTROPHORESIS AS SINGLE-STRAND CONFORMATION POLYMORPHISMS", PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF USA, vol. 86, no. 8, 1 April 1989 (1989-04-01), pages 2766 - 2770, XP000310584 * |
SAMBROOK J ET AL.: "Molecular cloning: A laboratory Manual. Vol.2: Partial digestion of high-molecular-weight eukaryotic DNA with restriction enzymes", 1989, COLD SPRING HARBOUR LABORATORY PRESS, COLD SPRING HARBOUR, XP002113808 * |
SMITH J ET AL: "MUTATION DETECTION WITH MUTH, MUTL, AND MUTS MISMATCH REPAIR PROTEINS", PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF USA,US,NATIONAL ACADEMY OF SCIENCE. WASHINGTON, vol. 93, 1 April 1996 (1996-04-01), pages 4374 - 4379, XP002030021, ISSN: 0027-8424 * |
Cited By (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US9206418B2 (en) | 2011-10-19 | 2015-12-08 | Nugen Technologies, Inc. | Compositions and methods for directional nucleic acid amplification and sequencing |
Also Published As
Publication number | Publication date |
---|---|
EP1173609A2 (en) | 2002-01-23 |
JP2002538837A (en) | 2002-11-19 |
CA2362771A1 (en) | 2000-09-21 |
WO2000055364A2 (en) | 2000-09-21 |
AU3178200A (en) | 2000-10-04 |
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