WO1999042827A3 - Device for detecting oligonucleotide and/or polynucleotide hybridization - Google Patents

Device for detecting oligonucleotide and/or polynucleotide hybridization Download PDF

Info

Publication number
WO1999042827A3
WO1999042827A3 PCT/DE1999/000460 DE9900460W WO9942827A3 WO 1999042827 A3 WO1999042827 A3 WO 1999042827A3 DE 9900460 W DE9900460 W DE 9900460W WO 9942827 A3 WO9942827 A3 WO 9942827A3
Authority
WO
WIPO (PCT)
Prior art keywords
polynucleotide hybridization
detecting oligonucleotide
oligonucleotide
polynucleotide
detection
Prior art date
Application number
PCT/DE1999/000460
Other languages
German (de)
French (fr)
Other versions
WO1999042827A2 (en
Inventor
Vladimir Mirsky
Michael Riepl
Original Assignee
Wolfbeis Otto Samuel
Vladimir Mirsky
Michael Riepl
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from DE1998107339 external-priority patent/DE19807339A1/en
Priority claimed from DE19807338A external-priority patent/DE19807338A1/en
Application filed by Wolfbeis Otto Samuel, Vladimir Mirsky, Michael Riepl filed Critical Wolfbeis Otto Samuel
Priority to EP99915484A priority Critical patent/EP1055004A2/en
Publication of WO1999042827A2 publication Critical patent/WO1999042827A2/en
Publication of WO1999042827A3 publication Critical patent/WO1999042827A3/en

Links

Classifications

    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N1/00Sampling; Preparing specimens for investigation
    • G01N1/28Preparing specimens for investigation including physical details of (bio-)chemical methods covered elsewhere, e.g. G01N33/50, C12Q
    • G01N1/40Concentrating samples
    • G01N1/405Concentrating samples by adsorption or absorption
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N27/00Investigating or analysing materials by the use of electric, electrochemical, or magnetic means
    • G01N27/02Investigating or analysing materials by the use of electric, electrochemical, or magnetic means by investigating impedance
    • G01N27/22Investigating or analysing materials by the use of electric, electrochemical, or magnetic means by investigating impedance by investigating capacitance
    • G01N27/221Investigating or analysing materials by the use of electric, electrochemical, or magnetic means by investigating impedance by investigating capacitance by investigating the dielectric properties
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N29/00Investigating or analysing materials by the use of ultrasonic, sonic or infrasonic waves; Visualisation of the interior of objects by transmitting ultrasonic or sonic waves through the object
    • G01N29/02Analysing fluids
    • G01N29/036Analysing fluids by measuring frequency or resonance of acoustic waves
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/543Immunoassay; Biospecific binding assay; Materials therefor with an insoluble carrier for immobilising immunochemicals
    • G01N33/54306Solid-phase reaction mechanisms
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/543Immunoassay; Biospecific binding assay; Materials therefor with an insoluble carrier for immobilising immunochemicals
    • G01N33/54366Apparatus specially adapted for solid-phase testing
    • G01N33/54373Apparatus specially adapted for solid-phase testing involving physiochemical end-point determination, e.g. wave-guides, FETS, gratings
    • G01N33/5438Electrodes
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/569Immunoassay; Biospecific binding assay; Materials therefor for microorganisms, e.g. protozoa, bacteria, viruses
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N2291/00Indexing codes associated with group G01N29/00
    • G01N2291/02Indexing codes associated with the analysed material
    • G01N2291/025Change of phase or condition
    • G01N2291/0256Adsorption, desorption, surface mass change, e.g. on biosensors
    • G01N2291/0257Adsorption, desorption, surface mass change, e.g. on biosensors with a layer containing at least one organic compound

Abstract

The invention relates to a device enabling the detection of oligonucleotide and/or polynucleotide. The invention further relates to an array enabling detection of different oligonucleotides and/or polynucleotides by means of electrochemical measurements.
PCT/DE1999/000460 1998-02-20 1999-02-19 Device for detecting oligonucleotide and/or polynucleotide hybridization WO1999042827A2 (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
EP99915484A EP1055004A2 (en) 1998-02-20 1999-02-19 Device for detecting oligonucleotide and/or polynucleotide hybridization

Applications Claiming Priority (4)

Application Number Priority Date Filing Date Title
DE1998107339 DE19807339A1 (en) 1998-02-20 1998-02-20 Sensitive surface for sensor
DE19807339.9 1998-02-20
DE19807338A DE19807338A1 (en) 1998-02-20 1998-02-20 Device for detecting nucleic acid hybridization
DE19807338.0 1998-02-20

Publications (2)

Publication Number Publication Date
WO1999042827A2 WO1999042827A2 (en) 1999-08-26
WO1999042827A3 true WO1999042827A3 (en) 1999-10-28

Family

ID=26044047

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/DE1999/000460 WO1999042827A2 (en) 1998-02-20 1999-02-19 Device for detecting oligonucleotide and/or polynucleotide hybridization

Country Status (2)

Country Link
EP (1) EP1055004A2 (en)
WO (1) WO1999042827A2 (en)

Families Citing this family (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2000070345A1 (en) 1999-05-14 2000-11-23 Iris Bio Technologies Reversible immobilization of ligands onto metal surfaces, their preparation and use in biochemical applications
EP1234182A2 (en) * 1999-06-30 2002-08-28 Iris Bio Technologies Hybridization of target dna with immobilized nucleic acid analogs
DE10113355A1 (en) * 2000-04-28 2001-09-13 Vladimir M Mirsky Chemical sensor used for the qualitative or quantitative detection of mercury consists of a receptor layer covered by one or more organic layers
DE10048997A1 (en) * 2000-09-27 2002-04-11 Santron Ag Device for the detection of charged macromolecules
AT413214B (en) * 2003-01-24 2005-12-15 Sy Lab Vgmbh MEASUREMENT ARRANGEMENT AND METHOD FOR DETECTING A DNA SEQUENCE

Citations (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1993020230A1 (en) * 1992-03-27 1993-10-14 Environmental & Medical Products Ltd Electrochemical detection of dna hybridisation
US5653939A (en) * 1991-11-19 1997-08-05 Massachusetts Institute Of Technology Optical and electrical methods and apparatus for molecule detection
WO1999014596A1 (en) * 1997-09-15 1999-03-25 Ab Sangtec Medical Capacity affinity sensor
WO1999027355A1 (en) * 1997-11-21 1999-06-03 Wolfbeis, Otto, Samuel Method for producing laterally organized structures on supporting surfaces
WO1999028047A2 (en) * 1997-11-29 1999-06-10 Wolfbeis, Otto, Samuel Artificial surface with predetermined affinity
DE19901761A1 (en) * 1999-01-18 1999-07-01 Gerhard Dr Hartwich Oligonucleotides tagged with photoinducible redox-active unit

Patent Citations (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5653939A (en) * 1991-11-19 1997-08-05 Massachusetts Institute Of Technology Optical and electrical methods and apparatus for molecule detection
WO1993020230A1 (en) * 1992-03-27 1993-10-14 Environmental & Medical Products Ltd Electrochemical detection of dna hybridisation
WO1999014596A1 (en) * 1997-09-15 1999-03-25 Ab Sangtec Medical Capacity affinity sensor
WO1999027355A1 (en) * 1997-11-21 1999-06-03 Wolfbeis, Otto, Samuel Method for producing laterally organized structures on supporting surfaces
WO1999028047A2 (en) * 1997-11-29 1999-06-10 Wolfbeis, Otto, Samuel Artificial surface with predetermined affinity
DE19901761A1 (en) * 1999-01-18 1999-07-01 Gerhard Dr Hartwich Oligonucleotides tagged with photoinducible redox-active unit

Non-Patent Citations (7)

* Cited by examiner, † Cited by third party
Title
HASHIMOTO K ET AL.: "Novel DNA sensor for electrochemical gene detection", ANALYTICA CHIMICA ACTA, vol. 286, 1994, pages 219 - 224, XP002113742 *
MARRAZZA G ET AL.: "Disposable DNA electrochemical sensor for hybridization detection", BIOSENSORS & BIOELECTRONICS, vol. 14, 1999, pages 43 - 51, XP002113746 *
MIKKELSEN S R: "Electrochemical sensors for DNA sequence detection", ELECTROANALYSIS, vol. 8, no. 1, 1996, pages 15 - 19, XP002113745 *
SCHLENOFF J B ET AL.: "Stability and self-exchange in alkanethiol monolayers", THE JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, vol. 117, 1995, pages 12528 - 12536, XP002113743 *
TARLOV M J: "Electron-transfer reaction of cytochrome c adsorbed on carboxylic acid terminated alkanethiol monolayer electrodes", THE JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, vol. 113, 1991, pages 1847 - 1849, XP002113744 *
WANG J ET AL.: "Nucleic-acid immobilization, recognition and detection at chronopotentiometric DNA chips", BIOSENSORS & BIOELECTRONICS, vol. 12, no. 7, 1997, pages 587 - 599, XP002113741 *
WANG J ET AL: "DNA ELECTROCHEMICAL BIOSENSOR FOR THE DETECTION OF SHORT DNA SEQUENCES RELATED TO THE HUMAN IMMUNODEFICIENCY VIRUS", ANALYTICAL CHEMISTRY, vol. 68, no. 15, 1 August 1996 (1996-08-01), pages 2629 - 2634, XP000623884, ISSN: 0003-2700 *

Also Published As

Publication number Publication date
EP1055004A2 (en) 2000-11-29
WO1999042827A2 (en) 1999-08-26

Similar Documents

Publication Publication Date Title
WO2002018631A3 (en) Diagnosis of illnesses or predisposition to certain illnesses
ZA200107497B (en) Methods for detection of nucleic acid polymorphisms using peptide-labeled oligonucleotides and antibody arrays.
EP1308523A3 (en) Detecting DNA sequence variations
WO2000050869A3 (en) Snp detection
WO2003020952A3 (en) Affinity-shifted probes for quantifying analyte polynucleotides
WO2003078652A3 (en) Modification of selectivity for sensing for nanostructure device arrays
CA2201595A1 (en) Compositions and methods for the simultaneous detection and quantification of multiple specific nucleic acid sequences
AU3519900A (en) Methods for single nucleotide polymorphism detection
WO1996022392A3 (en) Nucleic acid amplification oligonucleotides and probes to lyme disease associated borrelia
IL132966A0 (en) Method and system for detecting oligonucleotides in a sample
CA2195971A1 (en) Nucleic acid hybridization assay probes targeted to mycoplasma pneumoniae nucleic acid
WO2000042217A3 (en) Method for electrochemically detecting nucleic acid-oligomer hybridisation events
GB9827912D0 (en) Detecting nucleic acids
WO1999042827A3 (en) Device for detecting oligonucleotide and/or polynucleotide hybridization
WO2001066804A3 (en) Methods for optimizing hybridization performance of polynucleotide probes and localizing and detecting sequence variations
WO2002057488A3 (en) Gene detection method, detection device, and detection chip
EP0950718A4 (en) Method for detecting dna with probe pna
WO2004000995A3 (en) Methods, probes, and accessory molecules for detecting single nucleotide polymorphisms
WO2002030266A3 (en) Detection of dna damage
AU6213600A (en) Methods for determining the specificity and sensitivity of oligonucleotides for hybridization
WO2003002762A3 (en) Enhanced detection and distinction of differential gene expression by enzymatic probe ligation and amplification
AU2002223169A1 (en) Method for detecting molecules or chemical reactions by determining variation ofconductance
AU2002352121A1 (en) Method for detecting hybridization events in nucleic acids
AU2002357240A8 (en) Nucleic acid diagnostic reagents and methods for detecting nucleic acids, polynucleotides and oligonucleotides
WO2005026389A3 (en) Ligation-based method of analysis of single nucleotide polymorphisms on genomic dna

Legal Events

Date Code Title Description
AK Designated states

Kind code of ref document: A2

Designated state(s): CA JP US

AL Designated countries for regional patents

Kind code of ref document: A2

Designated state(s): AT BE CH CY DE DK ES FI FR GB GR IE IT LU MC NL PT SE

121 Ep: the epo has been informed by wipo that ep was designated in this application
AK Designated states

Kind code of ref document: A3

Designated state(s): CA JP US

AL Designated countries for regional patents

Kind code of ref document: A3

Designated state(s): AT BE CH CY DE DK ES FI FR GB GR IE IT LU MC NL PT SE

DFPE Request for preliminary examination filed prior to expiration of 19th month from priority date (pct application filed before 20040101)
WWE Wipo information: entry into national phase

Ref document number: 1999915484

Country of ref document: EP

WWE Wipo information: entry into national phase

Ref document number: 09622580

Country of ref document: US

WWP Wipo information: published in national office

Ref document number: 1999915484

Country of ref document: EP

NENP Non-entry into the national phase

Ref country code: CA

WWW Wipo information: withdrawn in national office

Ref document number: 1999915484

Country of ref document: EP