WO1996010196A3 - Method and apparatus for automatic focusing of biomedical specimens - Google Patents

Method and apparatus for automatic focusing of biomedical specimens Download PDF

Info

Publication number
WO1996010196A3
WO1996010196A3 PCT/US1995/010133 US9510133W WO9610196A3 WO 1996010196 A3 WO1996010196 A3 WO 1996010196A3 US 9510133 W US9510133 W US 9510133W WO 9610196 A3 WO9610196 A3 WO 9610196A3
Authority
WO
WIPO (PCT)
Prior art keywords
images
automatic focusing
coverslip
focus measure
focus
Prior art date
Application number
PCT/US1995/010133
Other languages
French (fr)
Other versions
WO1996010196A2 (en
Inventor
Keith L Frost
Jon W Hayenga
James A Stephanick
Robert C Schmidt
Original Assignee
Neopath Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Neopath Inc filed Critical Neopath Inc
Priority to CA002200463A priority Critical patent/CA2200463C/en
Priority to AU32171/95A priority patent/AU709136B2/en
Priority to JP8511734A priority patent/JPH10506206A/en
Priority to EP95928372A priority patent/EP0784805A2/en
Publication of WO1996010196A2 publication Critical patent/WO1996010196A2/en
Publication of WO1996010196A3 publication Critical patent/WO1996010196A3/en

Links

Classifications

    • GPHYSICS
    • G02OPTICS
    • G02BOPTICAL ELEMENTS, SYSTEMS OR APPARATUS
    • G02B7/00Mountings, adjusting means, or light-tight connections, for optical elements
    • G02B7/28Systems for automatic generation of focusing signals

Landscapes

  • Physics & Mathematics (AREA)
  • General Physics & Mathematics (AREA)
  • Optics & Photonics (AREA)
  • Microscoopes, Condenser (AREA)
  • Eye Examination Apparatus (AREA)
  • Automatic Focus Adjustment (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Prostheses (AREA)
  • Measurement Of The Respiration, Hearing Ability, Form, And Blood Characteristics Of Living Organisms (AREA)

Abstract

A method for automatically focusing on a slide includes the steps of locating a coverslip (401-411), acquiring images from predetermined focal depths in the slide (412), and starting at an initial focal depth proximate the surface of the coverslip (202). A set of predetermined characteristics within each of the images are measured (511) to generate at least one image measurement for each of the plurality of images. A focus measure is computed (511) for each of the images, where each focus measure is a function of at least one image measurement. A best focus location is determined (512) relative to a focal depth where an acquired image has a highest focus measure.
PCT/US1995/010133 1994-09-20 1995-08-08 Method and apparatus for automatic focusing of biomedical specimens WO1996010196A2 (en)

Priority Applications (4)

Application Number Priority Date Filing Date Title
CA002200463A CA2200463C (en) 1994-09-20 1995-08-08 Method and apparatus for automatic focusing of biomedical specimens
AU32171/95A AU709136B2 (en) 1994-09-20 1995-08-08 Automatic focusing of biomedical specimens apparatus
JP8511734A JPH10506206A (en) 1994-09-20 1995-08-08 Automatic focusing device for medical and biological specimens
EP95928372A EP0784805A2 (en) 1994-09-20 1995-08-08 Automatic focusing of biomedical specimens apparatus

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US08/309,405 1994-09-20
US08/309,405 US5647025A (en) 1994-09-20 1994-09-20 Automatic focusing of biomedical specimens apparatus

Publications (2)

Publication Number Publication Date
WO1996010196A2 WO1996010196A2 (en) 1996-04-04
WO1996010196A3 true WO1996010196A3 (en) 1996-07-04

Family

ID=23198101

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US1995/010133 WO1996010196A2 (en) 1994-09-20 1995-08-08 Method and apparatus for automatic focusing of biomedical specimens

Country Status (6)

Country Link
US (1) US5647025A (en)
EP (1) EP0784805A2 (en)
JP (1) JPH10506206A (en)
AU (1) AU709136B2 (en)
CA (1) CA2200463C (en)
WO (1) WO1996010196A2 (en)

Families Citing this family (85)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5557097A (en) * 1994-09-20 1996-09-17 Neopath, Inc. Cytological system autofocus integrity checking apparatus
EP1045340A3 (en) * 1995-03-29 2000-10-25 Fuji Photo Film Co., Ltd. Image processing method and apparatus
US5787208A (en) * 1995-06-07 1998-07-28 Neopath, Inc. Image enhancement method and apparatus
US5768401A (en) * 1995-08-02 1998-06-16 Lucent Technologies Inc. Balanced focus system and method for achieving optimal focus of different areas of an object that are concurrently imaged
US6215892B1 (en) * 1995-11-30 2001-04-10 Chromavision Medical Systems, Inc. Method and apparatus for automated image analysis of biological specimens
US6718053B1 (en) * 1996-11-27 2004-04-06 Chromavision Medical Systems, Inc. Method and apparatus for automated image analysis of biological specimens
US6043475A (en) * 1996-04-16 2000-03-28 Olympus Optical Co., Ltd. Focal point adjustment apparatus and method applied to microscopes
US5995143A (en) * 1997-02-07 1999-11-30 Q3Dm, Llc Analog circuit for an autofocus microscope system
US6148099A (en) * 1997-07-03 2000-11-14 Neopath, Inc. Method and apparatus for incremental concurrent learning in automatic semiconductor wafer and liquid crystal display defect classification
US6130967A (en) * 1997-07-03 2000-10-10 Tri Path Imaging, Inc. Method and apparatus for a reduced instruction set architecture for multidimensional image processing
US6122397A (en) * 1997-07-03 2000-09-19 Tri Path Imaging, Inc. Method and apparatus for maskless semiconductor and liquid crystal display inspection
US6396039B1 (en) * 1999-03-11 2002-05-28 Corning Incorporated Focusing filament for autofocus system
AU762085B2 (en) 1999-04-13 2003-06-19 Chromavision Medical Systems, Inc. Histological reconstruction and automated image analysis
WO2000062241A1 (en) * 1999-04-14 2000-10-19 Tripath, Inc. Method and apparatus for determining microscope specimen preparation type
CA2374910C (en) * 1999-06-04 2009-10-06 Janssen Pharmaceutica N.V. Robust autofocus system for a microscope
US7369304B2 (en) * 1999-10-29 2008-05-06 Cytyc Corporation Cytological autofocusing imaging systems and methods
GB0005194D0 (en) * 2000-03-04 2000-04-26 Idiris Limited Imaging system
CA2403192C (en) * 2000-03-30 2007-11-13 British Telecommunications Public Limited Company Image processing
US7518652B2 (en) 2000-05-03 2009-04-14 Aperio Technologies, Inc. Method and apparatus for pre-focus in a linear array based slide scanner
US7738688B2 (en) 2000-05-03 2010-06-15 Aperio Technologies, Inc. System and method for viewing virtual slides
US6711283B1 (en) * 2000-05-03 2004-03-23 Aperio Technologies, Inc. Fully automatic rapid microscope slide scanner
US6518554B1 (en) * 2000-05-24 2003-02-11 Chromavision Medical Systems, Inc. Reverse focusing methods and systems
US6763140B1 (en) 2000-09-07 2004-07-13 Chipworks Method and apparatus for focusing a micro-imaging system onto a tilted or uneven sample to acquire images of the sample
US6993169B2 (en) * 2001-01-11 2006-01-31 Trestle Corporation System and method for finding regions of interest for microscopic digital montage imaging
US6816606B2 (en) * 2001-02-21 2004-11-09 Interscope Technologies, Inc. Method for maintaining high-quality focus during high-throughput, microscopic digital montage imaging
US7155049B2 (en) * 2001-01-11 2006-12-26 Trestle Acquisition Corp. System for creating microscopic digital montage images
DE10106698A1 (en) * 2001-02-14 2002-08-29 Leica Microsystems Method and device for automatically focusing an optical device
JP2003125172A (en) * 2001-10-10 2003-04-25 Pfu Ltd Control method for image reader
EP1306805A1 (en) * 2001-10-25 2003-05-02 Mitsubishi Electric Information Technology Centre Europe B.V. Image Analysis
WO2003042788A2 (en) 2001-11-13 2003-05-22 Chromavision Medical Systems, Inc. A system for tracking biological samples
US20030118245A1 (en) * 2001-12-21 2003-06-26 Leonid Yaroslavsky Automatic focusing of an imaging system
US7221805B1 (en) * 2001-12-21 2007-05-22 Cognex Technology And Investment Corporation Method for generating a focused image of an object
US7272252B2 (en) * 2002-06-12 2007-09-18 Clarient, Inc. Automated system for combining bright field and fluorescent microscopy
JP4048265B2 (en) * 2002-08-26 2008-02-20 独立行政法人科学技術振興機構 Single-cell long-term observation device
US7302096B2 (en) * 2002-10-17 2007-11-27 Seiko Epson Corporation Method and apparatus for low depth of field image segmentation
US20040105000A1 (en) * 2002-11-29 2004-06-03 Olymlpus Corporation Microscopic image capture apparatus
US6993187B2 (en) * 2003-02-14 2006-01-31 Ikonisys, Inc. Method and system for object recognition using fractal maps
US7062079B2 (en) * 2003-02-14 2006-06-13 Ikonisys, Inc. Method and system for image segmentation
US6876776B2 (en) * 2003-02-14 2005-04-05 Ikonicys, Inc. System and method for auto-focusing an image
US20040202357A1 (en) 2003-04-11 2004-10-14 Perz Cynthia B. Silhouette image acquisition
US7196300B2 (en) * 2003-07-18 2007-03-27 Rudolph Technologies, Inc. Dynamic focusing method and apparatus
US20050089208A1 (en) * 2003-07-22 2005-04-28 Rui-Tao Dong System and method for generating digital images of a microscope slide
US8659619B2 (en) * 2004-03-26 2014-02-25 Intellectual Ventures Fund 83 Llc Display device and method for determining an area of importance in an original image
TWM256493U (en) * 2004-04-30 2005-02-01 Shang Hang Internat Co Semi-automatic image-taking microscopic equipment for inspecting objects on conveyor
US7653260B2 (en) * 2004-06-17 2010-01-26 Carl Zeis MicroImaging GmbH System and method of registering field of view
US8582924B2 (en) * 2004-06-30 2013-11-12 Carl Zeiss Microimaging Gmbh Data structure of an image storage and retrieval system
TWI422896B (en) * 2004-07-12 2014-01-11 August Technology Corp Dynamic focusing method and apparatus
US7113625B2 (en) * 2004-10-01 2006-09-26 U.S. Pathology Labs, Inc. System and method for image analysis of slides
US20060159325A1 (en) * 2005-01-18 2006-07-20 Trestle Corporation System and method for review in studies including toxicity and risk assessment studies
WO2006078928A2 (en) * 2005-01-18 2006-07-27 Trestle Corporation System and method for creating variable quality images of a slide
US20070031056A1 (en) * 2005-08-02 2007-02-08 Perz Cynthia B System for and method of focusing in automated microscope systems
US20070031043A1 (en) * 2005-08-02 2007-02-08 Perz Cynthia B System for and method of intelligently directed segmentation analysis for automated microscope systems
US20070091109A1 (en) * 2005-09-13 2007-04-26 Roscoe Atkinson Image quality
JP4915071B2 (en) * 2005-09-22 2012-04-11 株式会社ニコン Microscope and virtual slide creation system
US7697827B2 (en) 2005-10-17 2010-04-13 Konicek Jeffrey C User-friendlier interfaces for a camera
WO2007095330A2 (en) 2006-02-15 2007-08-23 Hologic Inc Breast biopsy and needle localization using tomosynthesis systems
JP4917331B2 (en) * 2006-03-01 2012-04-18 浜松ホトニクス株式会社 Image acquisition apparatus, image acquisition method, and image acquisition program
JPWO2007145091A1 (en) * 2006-06-15 2009-10-29 株式会社ニコン Cell culture equipment
JP4663602B2 (en) * 2006-08-14 2011-04-06 オリンパス株式会社 Automatic focusing device, microscope and automatic focusing method
US7769219B2 (en) * 2006-12-11 2010-08-03 Cytyc Corporation Method for assessing image focus quality
US8179432B2 (en) * 2007-04-30 2012-05-15 General Electric Company Predictive autofocusing
EP2191414B1 (en) * 2007-08-17 2019-02-13 CDx Medical IP, Inc. Feature dependent extended depth of focusing on semi-transparent biological specimens
WO2009107321A1 (en) * 2008-02-28 2009-09-03 株式会社ニコン Microscope apparatus and cell culture apparatus
WO2009106081A1 (en) 2008-02-29 2009-09-03 Dako Denmark A/S Systems and methods for tracking and providing workflow information
US20100157086A1 (en) 2008-12-15 2010-06-24 Illumina, Inc Dynamic autofocus method and system for assay imager
DE102009041183A1 (en) * 2009-09-11 2011-03-24 Carl Zeiss Imaging Solutions Gmbh Method for automatically focusing a microscope on a predetermined object and microscope for automatic focusing
WO2011043838A1 (en) 2009-10-08 2011-04-14 Hologic, Inc . Needle breast biopsy system and method of use
US20110115896A1 (en) * 2009-11-19 2011-05-19 Drexel University High-speed and large-scale microscope imaging
WO2012071429A1 (en) 2010-11-26 2012-05-31 Hologic, Inc. User interface for medical image review workstation
AU2012225398B2 (en) 2011-03-08 2017-02-02 Hologic, Inc. System and method for dual energy and/or contrast enhanced breast imaging for screening, diagnosis and biopsy
DE102011075809A1 (en) * 2011-05-13 2012-11-15 Carl Zeiss Microimaging Gmbh Method and device for defining a z-range in a sample, in which a z-stack of the sample is to be picked up by means of a microscope
KR102109588B1 (en) 2011-11-27 2020-05-12 홀로직, 인크. Methods for processing, displaying and navigating breast tissue images
ES2641456T3 (en) 2012-02-13 2017-11-10 Hologic, Inc. System and method for navigating a tomosynthesis stack using synthesized image data
US20140186859A1 (en) 2012-05-09 2014-07-03 Advanced Animal Diagnostic, Inc. Autofocus method for imaging a biological sample and cartridge for use therein
WO2013192396A1 (en) 2012-06-20 2013-12-27 Advanced Animal Diagnostics, Inc. Sample collection and transfer assembly and related methods
JP6061619B2 (en) 2012-10-30 2017-01-18 オリンパス株式会社 Microscope system
CN105451657A (en) 2013-03-15 2016-03-30 霍罗吉克公司 System and method for navigating tomosynthesis stack including automatic focusing
US10092358B2 (en) 2013-03-15 2018-10-09 Hologic, Inc. Tomosynthesis-guided biopsy apparatus and method
WO2015130916A1 (en) 2014-02-28 2015-09-03 Hologic, Inc. System and method for generating and displaying tomosynthesis image slabs
CN107111124B (en) * 2014-10-29 2020-04-21 分子装置有限公司 Apparatus and method for generating in-focus image using parallel imaging in microscope system
JP6799924B2 (en) * 2016-02-16 2020-12-16 株式会社Screenホールディングス Cell observation device and cell observation method
JP7169986B2 (en) 2017-03-30 2022-11-11 ホロジック, インコーポレイテッド Systems and methods for synthesizing low-dimensional image data from high-dimensional image data using object grid augmentation
EP3600047A1 (en) 2017-03-30 2020-02-05 Hologic, Inc. System and method for hierarchical multi-level feature image synthesis and representation
JP7174710B2 (en) 2017-03-30 2022-11-17 ホロジック, インコーポレイテッド Systems and Methods for Targeted Object Augmentation to Generate Synthetic Breast Tissue Images
US11403483B2 (en) 2017-06-20 2022-08-02 Hologic, Inc. Dynamic self-learning medical image method and system

Citations (8)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4584704A (en) * 1984-03-01 1986-04-22 Bran Ferren Spatial imaging system
US4600832A (en) * 1983-10-28 1986-07-15 Nanometrics Incorporated Method and apparatus for automatic optical focusing on an optically discernible feature on an object
US4693608A (en) * 1984-10-29 1987-09-15 Toray Industries, Inc. Method and apparatus for determining position of points on article
US4899194A (en) * 1987-11-24 1990-02-06 Fuji Photo Film Co., Ltd. Method of and device for detecting image
US5003165A (en) * 1989-05-25 1991-03-26 International Remote Imaging Systems, Inc. Method and an apparatus for selecting the best focal position from a plurality of focal positions
US5040228A (en) * 1989-08-28 1991-08-13 At&T Bell Laboratories Method and apparatus for automatically focusing an image-acquisition device
US5287272A (en) * 1988-04-08 1994-02-15 Neuromedical Systems, Inc. Automated cytological specimen classification system and method
US5430288A (en) * 1991-02-19 1995-07-04 Linotype-Hell Ag Method and apparatus for setting the sharpness of an optical imaging system

Family Cites Families (11)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CH518562A (en) * 1970-02-24 1972-01-31 Zeiss Carl Fa Method and device for the automatic focusing of microscopes
US4045772A (en) * 1974-04-29 1977-08-30 Geometric Data Corporation Automatic focusing system
US4012634A (en) * 1974-04-29 1977-03-15 Geometric Data Corporation Automatic focusing system including quantizing means
US4000417A (en) * 1975-08-25 1976-12-28 Honeywell Inc. Scanning microscope system with automatic cell find and autofocus
US4342905A (en) * 1979-08-31 1982-08-03 Nippon Kogaku K.K. Automatic focusing device of a microscope
JPS63167313A (en) * 1986-12-27 1988-07-11 Hitachi Ltd Automatic focus control method
JP2928548B2 (en) * 1989-08-02 1999-08-03 株式会社日立製作所 Three-dimensional shape detection method and device
US5257182B1 (en) * 1991-01-29 1996-05-07 Neuromedical Systems Inc Morphological classification system and method
US5239170A (en) * 1991-10-23 1993-08-24 Karl Suss America, Incorporated Autofocus method and apparatus for imaging microscopy using a predetermined visual imaging feature
US5179419A (en) * 1991-11-22 1993-01-12 At&T Bell Laboratories Methods of detecting, classifying and quantifying defects in optical fiber end faces
US5315700A (en) * 1992-02-18 1994-05-24 Neopath, Inc. Method and apparatus for rapidly processing data sequences

Patent Citations (9)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4600832A (en) * 1983-10-28 1986-07-15 Nanometrics Incorporated Method and apparatus for automatic optical focusing on an optically discernible feature on an object
US4584704A (en) * 1984-03-01 1986-04-22 Bran Ferren Spatial imaging system
US4693608A (en) * 1984-10-29 1987-09-15 Toray Industries, Inc. Method and apparatus for determining position of points on article
US4899194A (en) * 1987-11-24 1990-02-06 Fuji Photo Film Co., Ltd. Method of and device for detecting image
US5287272A (en) * 1988-04-08 1994-02-15 Neuromedical Systems, Inc. Automated cytological specimen classification system and method
US5287272B1 (en) * 1988-04-08 1996-08-27 Neuromedical Systems Inc Automated cytological specimen classification system and method
US5003165A (en) * 1989-05-25 1991-03-26 International Remote Imaging Systems, Inc. Method and an apparatus for selecting the best focal position from a plurality of focal positions
US5040228A (en) * 1989-08-28 1991-08-13 At&T Bell Laboratories Method and apparatus for automatically focusing an image-acquisition device
US5430288A (en) * 1991-02-19 1995-07-04 Linotype-Hell Ag Method and apparatus for setting the sharpness of an optical imaging system

Also Published As

Publication number Publication date
CA2200463C (en) 2002-04-16
AU709136B2 (en) 1999-08-19
EP0784805A2 (en) 1997-07-23
CA2200463A1 (en) 1996-04-04
US5647025A (en) 1997-07-08
JPH10506206A (en) 1998-06-16
WO1996010196A2 (en) 1996-04-04
AU3217195A (en) 1996-04-19

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