CA2445863C - Reagent delivery system - Google Patents
Reagent delivery system Download PDFInfo
- Publication number
- CA2445863C CA2445863C CA 2445863 CA2445863A CA2445863C CA 2445863 C CA2445863 C CA 2445863C CA 2445863 CA2445863 CA 2445863 CA 2445863 A CA2445863 A CA 2445863A CA 2445863 C CA2445863 C CA 2445863C
- Authority
- CA
- Canada
- Prior art keywords
- reaction
- test
- support unit
- reagent
- unit according
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Expired - Fee Related
Links
- 239000003153 chemical reaction reagent Substances 0.000 title claims abstract description 131
- 238000006243 chemical reaction Methods 0.000 claims abstract description 106
- 238000012360 testing method Methods 0.000 claims abstract description 83
- 238000003556 assay Methods 0.000 claims abstract description 44
- 239000007788 liquid Substances 0.000 claims abstract description 31
- 239000011324 bead Substances 0.000 claims description 18
- 239000002322 conducting polymer Substances 0.000 claims description 16
- 229920001940 conductive polymer Polymers 0.000 claims description 16
- 238000010438 heat treatment Methods 0.000 claims description 13
- 229920000642 polymer Polymers 0.000 claims description 9
- 238000000605 extraction Methods 0.000 claims description 7
- 239000011888 foil Substances 0.000 claims description 7
- 238000000746 purification Methods 0.000 claims description 7
- 238000010791 quenching Methods 0.000 claims description 7
- 239000000463 material Substances 0.000 claims description 6
- 230000000171 quenching effect Effects 0.000 claims description 6
- 238000001816 cooling Methods 0.000 claims description 5
- 238000012806 monitoring device Methods 0.000 claims description 4
- -1 polypropylene Polymers 0.000 claims description 4
- 238000007789 sealing Methods 0.000 claims description 4
- 239000004743 Polypropylene Substances 0.000 claims description 3
- 229920001155 polypropylene Polymers 0.000 claims description 3
- 238000003756 stirring Methods 0.000 claims description 3
- 239000007844 bleaching agent Substances 0.000 claims description 2
- 239000003795 chemical substances by application Substances 0.000 claims description 2
- 239000002131 composite material Substances 0.000 claims description 2
- 238000010276 construction Methods 0.000 claims description 2
- 239000002184 metal Substances 0.000 claims description 2
- 244000005700 microbiome Species 0.000 claims description 2
- 239000002991 molded plastic Substances 0.000 claims description 2
- 239000004094 surface-active agent Substances 0.000 claims description 2
- 238000003860 storage Methods 0.000 abstract description 56
- 238000003780 insertion Methods 0.000 abstract description 3
- 230000037431 insertion Effects 0.000 abstract description 3
- 238000000034 method Methods 0.000 description 18
- 102000002281 Adenylate kinase Human genes 0.000 description 6
- 108020000543 Adenylate kinase Proteins 0.000 description 6
- 239000007787 solid Substances 0.000 description 5
- IGXWBGJHJZYPQS-SSDOTTSWSA-N D-Luciferin Chemical compound OC(=O)[C@H]1CSC(C=2SC3=CC=C(O)C=C3N=2)=N1 IGXWBGJHJZYPQS-SSDOTTSWSA-N 0.000 description 4
- 230000001580 bacterial effect Effects 0.000 description 4
- 238000004458 analytical method Methods 0.000 description 3
- 238000001514 detection method Methods 0.000 description 3
- 230000000694 effects Effects 0.000 description 3
- 230000005484 gravity Effects 0.000 description 3
- 235000015097 nutrients Nutrition 0.000 description 3
- 238000003752 polymerase chain reaction Methods 0.000 description 3
- 230000001681 protective effect Effects 0.000 description 3
- 239000011541 reaction mixture Substances 0.000 description 3
- CYCGRDQQIOGCKX-UHFFFAOYSA-N Dehydro-luciferin Natural products OC(=O)C1=CSC(C=2SC3=CC(O)=CC=C3N=2)=N1 CYCGRDQQIOGCKX-UHFFFAOYSA-N 0.000 description 2
- BJGNCJDXODQBOB-UHFFFAOYSA-N Fivefly Luciferin Natural products OC(=O)C1CSC(C=2SC3=CC(O)=CC=C3N=2)=N1 BJGNCJDXODQBOB-UHFFFAOYSA-N 0.000 description 2
- 108060001084 Luciferase Proteins 0.000 description 2
- 239000005089 Luciferase Substances 0.000 description 2
- DDWFXDSYGUXRAY-UHFFFAOYSA-N Luciferin Natural products CCc1c(C)c(CC2NC(=O)C(=C2C=C)C)[nH]c1Cc3[nH]c4C(=C5/NC(CC(=O)O)C(C)C5CC(=O)O)CC(=O)c4c3C DDWFXDSYGUXRAY-UHFFFAOYSA-N 0.000 description 2
- 241000724768 Phage 13 Species 0.000 description 2
- 230000003321 amplification Effects 0.000 description 2
- 238000011109 contamination Methods 0.000 description 2
- 238000000021 kinase assay Methods 0.000 description 2
- 238000002156 mixing Methods 0.000 description 2
- 239000000203 mixture Substances 0.000 description 2
- 238000003199 nucleic acid amplification method Methods 0.000 description 2
- 239000000243 solution Substances 0.000 description 2
- 241001504639 Alcedo atthis Species 0.000 description 1
- 239000004677 Nylon Substances 0.000 description 1
- 239000004698 Polyethylene Substances 0.000 description 1
- 239000013504 Triton X-100 Substances 0.000 description 1
- 229920004890 Triton X-100 Polymers 0.000 description 1
- 238000005842 biochemical reaction Methods 0.000 description 1
- 230000029918 bioluminescence Effects 0.000 description 1
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- 239000000376 reactant Substances 0.000 description 1
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- 238000010998 test method Methods 0.000 description 1
- 238000005382 thermal cycling Methods 0.000 description 1
Classifications
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- Y10—TECHNICAL SUBJECTS COVERED BY FORMER USPC
- Y10T—TECHNICAL SUBJECTS COVERED BY FORMER US CLASSIFICATION
- Y10T436/00—Chemistry: analytical and immunological testing
- Y10T436/25—Chemistry: analytical and immunological testing including sample preparation
- Y10T436/25375—Liberation or purification of sample or separation of material from a sample [e.g., filtering, centrifuging, etc.]
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- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y10—TECHNICAL SUBJECTS COVERED BY FORMER USPC
- Y10T—TECHNICAL SUBJECTS COVERED BY FORMER US CLASSIFICATION
- Y10T436/00—Chemistry: analytical and immunological testing
- Y10T436/25—Chemistry: analytical and immunological testing including sample preparation
- Y10T436/2575—Volumetric liquid transfer
Abstract
A delivery apparatus for selectively delivering one or more liquid reagents into a reaction or test chamber (2), especially of an assay apparatus, the apparatus comprising: one or more respective storage chambers (5,6) for containing the one or more liquid reagents and arranged generally above the reaction or test chamber (2); and a plunger element (4) arranged and operable for insertion into the mouth of a selected storage chamber so as to displace a selected reagent from therewithin into the reaction or test chamber (2) generally therebelow by gravitational liquid overflow from the mouth of the chamber. The apparatus may conveniently be provided as a discrete delivery unit, with the storage chambers (5,6) prefilled with the selected reagents.
Description
REAGENT DELIVERY SYSTEM
This invention relates to a reagent delivery system, more particularly to an apparatus for selectively delivering one or more liquid reagents into a reaction or test chamber of for example an assay apparatus. The invention also relates to a discrete reagent delivery unit for use therein, as well as to a method for delivering one or more liquid reagents to a reaction or test chamber in such an apparatus.
Many biochemical reaction procedures, such as the extraction and purification of DNA or the detection of microorganisms, require the sequential addition of one or more (typically a plurality of) reagents, to a reaction or test chamber, often in accurately measured and/or timed amounts, and which reagents must be kept separate prior to use. However, given this requirement for separate storage prior to delivery, it is difficult to provide for selective delivery of each reagent in accurately measured and/or timed amounts utilising an apparatus that is simple, compact and cost-effective. These conflicting criteria are made all the more difficult to realise practically and commercially in the context of an automated test or assay apparatus, where it is desirable that set-up procedures are simplified and overall cost, system maintenance and operator involvement are minimised.
Although there are many known commercial examples of test or assay apparatuses incorporating various types of reagent delivery system, most if not all are deficient in at least one or some of the above-mentioned criteria.
In a first aspect the present invention provides a delivery apparatus for selectively delivering one or more liquid reagents into a reaction or test chamber, the apparatus comprising:
one or more respective storage chambers for containing the one or more liquid reagents and arranged generally above the reaction or test chamber; and a plunger element arranged and operable for insertion into the mouth of a selected storage chamber so as to displace a selected reagent from therewithin into the reaction or test chamber generally therebelow by gravitational liquid overflow from the mouth of the chamber.
Embodiments of the apparatus of the invention provide a reagent delivery system which allows for separate reagent storage prior to use, together with accuracy of dosed amounts and/or times as and when desired, yet utilising an apparatus which may be cheap, compact and simple to set up, use and maintain.
The underlying principle of apparatus embodying the invention has been found to be the use of a plunger inserted into a liquid reagent-containing storage chamber to cause displacement of the reagent so that it overflows from the storage chamber mouth and flows under gravity into a reaction or test chamber arranged generally below the storage chamber.
In preferred practical embodiments of this first aspect of the invention the delivery apparatus forms part of a reaction, test or assay apparatus, especially an automated one, which comprises the said reaction or test chamber, the said one or more respective storage chambers arranged generally thereabove and the said plunger element, together with control means for controlling physical movement of the plunger element.
The apparatus may further comprise heating means arranged to control the temperature of reagents within the said reaction or test chamber and/or the one or more storage chambers. The heating means suitably comprises an electrically conducting polymer as described in more detail below, which is heatable by means of passing a controlled electric current through it. Thus the apparatus may further comprise control means such as computer control means, for the heating means.
= 29991-52 The control means will preferably generally comprise mechanical means for engaging and physically moving the plunger, such as are well known in existing test or assay machines, and appropriate hardware and software programmed to effect predetermined movements of the plunger element according to whatever reaction, test or assay procedure(s) is/are to be effected using the apparatus. More will be said about this further below.
The delivery apparatus of this first aspect of the invention may for example be employed in a final stage of a multi-stage assay apparatus, e.g. for carrying out adenylate kinase (AK) amplification assays for detecting bacterial contamination of food, in which several reagents are required to be sequentially delivered to a test chamber containing a pre-prepared sample for the purpose of AK-phage endpoint analysis. An example of such an assay technique is described in EP-A-0 680 515. As another example, this delivery apparatus could be employed as a discrete stage in the extraction and purification of DNA, where sequential delivery of several different reagent liquids to a single reaction vessel is required.
In practical terms, use of the above-defined delivery apparatus in either of the above exemplary cases may be made all the more expedient by providing the reaction or test chamber and the one or more reagent storage chamber(s) as a unitary, discrete unit.
Accordingly, in a second aspect the invention provides a reaction or test unit including a reaction or test chamber, for use in a reaction or test procedure in which one or more liquid reagents are selectively delivered into the reaction or test chamber, the unit further comprising one or more respective storage chambers for containing the one or more liquid reagents, wherein the one or more storage chambers have closed bottoms, openable or open mouths and are arranged generally above the reaction or test chamber.
This invention relates to a reagent delivery system, more particularly to an apparatus for selectively delivering one or more liquid reagents into a reaction or test chamber of for example an assay apparatus. The invention also relates to a discrete reagent delivery unit for use therein, as well as to a method for delivering one or more liquid reagents to a reaction or test chamber in such an apparatus.
Many biochemical reaction procedures, such as the extraction and purification of DNA or the detection of microorganisms, require the sequential addition of one or more (typically a plurality of) reagents, to a reaction or test chamber, often in accurately measured and/or timed amounts, and which reagents must be kept separate prior to use. However, given this requirement for separate storage prior to delivery, it is difficult to provide for selective delivery of each reagent in accurately measured and/or timed amounts utilising an apparatus that is simple, compact and cost-effective. These conflicting criteria are made all the more difficult to realise practically and commercially in the context of an automated test or assay apparatus, where it is desirable that set-up procedures are simplified and overall cost, system maintenance and operator involvement are minimised.
Although there are many known commercial examples of test or assay apparatuses incorporating various types of reagent delivery system, most if not all are deficient in at least one or some of the above-mentioned criteria.
In a first aspect the present invention provides a delivery apparatus for selectively delivering one or more liquid reagents into a reaction or test chamber, the apparatus comprising:
one or more respective storage chambers for containing the one or more liquid reagents and arranged generally above the reaction or test chamber; and a plunger element arranged and operable for insertion into the mouth of a selected storage chamber so as to displace a selected reagent from therewithin into the reaction or test chamber generally therebelow by gravitational liquid overflow from the mouth of the chamber.
Embodiments of the apparatus of the invention provide a reagent delivery system which allows for separate reagent storage prior to use, together with accuracy of dosed amounts and/or times as and when desired, yet utilising an apparatus which may be cheap, compact and simple to set up, use and maintain.
The underlying principle of apparatus embodying the invention has been found to be the use of a plunger inserted into a liquid reagent-containing storage chamber to cause displacement of the reagent so that it overflows from the storage chamber mouth and flows under gravity into a reaction or test chamber arranged generally below the storage chamber.
In preferred practical embodiments of this first aspect of the invention the delivery apparatus forms part of a reaction, test or assay apparatus, especially an automated one, which comprises the said reaction or test chamber, the said one or more respective storage chambers arranged generally thereabove and the said plunger element, together with control means for controlling physical movement of the plunger element.
The apparatus may further comprise heating means arranged to control the temperature of reagents within the said reaction or test chamber and/or the one or more storage chambers. The heating means suitably comprises an electrically conducting polymer as described in more detail below, which is heatable by means of passing a controlled electric current through it. Thus the apparatus may further comprise control means such as computer control means, for the heating means.
= 29991-52 The control means will preferably generally comprise mechanical means for engaging and physically moving the plunger, such as are well known in existing test or assay machines, and appropriate hardware and software programmed to effect predetermined movements of the plunger element according to whatever reaction, test or assay procedure(s) is/are to be effected using the apparatus. More will be said about this further below.
The delivery apparatus of this first aspect of the invention may for example be employed in a final stage of a multi-stage assay apparatus, e.g. for carrying out adenylate kinase (AK) amplification assays for detecting bacterial contamination of food, in which several reagents are required to be sequentially delivered to a test chamber containing a pre-prepared sample for the purpose of AK-phage endpoint analysis. An example of such an assay technique is described in EP-A-0 680 515. As another example, this delivery apparatus could be employed as a discrete stage in the extraction and purification of DNA, where sequential delivery of several different reagent liquids to a single reaction vessel is required.
In practical terms, use of the above-defined delivery apparatus in either of the above exemplary cases may be made all the more expedient by providing the reaction or test chamber and the one or more reagent storage chamber(s) as a unitary, discrete unit.
Accordingly, in a second aspect the invention provides a reaction or test unit including a reaction or test chamber, for use in a reaction or test procedure in which one or more liquid reagents are selectively delivered into the reaction or test chamber, the unit further comprising one or more respective storage chambers for containing the one or more liquid reagents, wherein the one or more storage chambers have closed bottoms, openable or open mouths and are arranged generally above the reaction or test chamber.
If desired the test chamber and/or the storage chamber may be supplied with heating and/or cooling means. Where the test chamber is provided with such means, it is possible to readily conduct reactions within the test chamber that require heating or cooling or thermal cycling, such as amplification reactions, for instance the polymerase chain reaction (PCR). Where the storage chambers are provided with heating and/or cooling means, these may be employed to allow reagents to be delivered to the test chamber at a particular temperature.
In particular, the heating means comprises an electrically conducting polymer, for example as described in WO 98/24548.
The polymer heats when an electric current is passed through it.
However, the low thermal mass of the polymer means that rapid cooling can also be assured when the current is off.
These polymers are flexible and convenient, as they may be folded or shaped to make intimate contact with any reaction vessel including test and/or storage chambers of the present invention. Thus, the polymer may form for example a sheath around the test and/or storage chambers, or it may be integral with it.
Where the test chamber and/or the storage chambers include electrically conducting polymers as an integral part thereof, they may be made from the polymer by extrusion, injection moulding or similar techniques. Alternatively, the test chamber or storage chamber may be manufactured using a composite construction in which a layer of the conducting polymer is interposed between layers of the material from which the vessel is made or in which the internal or external surfaces of the reaction vessel is coated with the polymer, or again in which the vessel is basically made of the polymer coated with a thin laminate of a PCR compatible material. Such vessels may be produced using lamination and/or deposition such as chemical or = 29991-52 electrochemical deposition techniques as is conventional in the art.
In a particular embodiment however, the test and/or storge chambers have electrically conducting polymer integral only with 5 a particular region of the test or storage chambers, and in particular a lower region where reagents are contained or stored. This provides for efficient heating just of the reagents and not of other regions of the chambers. Such chambers may be produced using conventional "overmoulding"
techniques.
Test or storage chambers which comprise the polymer as an integral part may provide particularly compact structures.
In preferred practical embodiments of this second aspect of the invention the reaction or test chamber and the one or more storage chambers are formed of, and preferably contained within an integral housing of, a suitable moulded plastics material, e.g. polypropylene. The housing may preferably include an upper peripheral wall which collectively surrounds and extends upwardly past the mouths of the storage chambers in order to act as a baffle to direct liquid reagents overflowing from the chambers into the reaction or test chamber therebelow.
Where the test or storage chambers include electrically conducting polymers, the housing may be provided with electrical contacts, arranged to contact the electrically conducting polymer heating means when the test or storage chambers are in position in the housing. These contacts are suitably connected to an electrical supply, preferably by way of an automatic controller such as a computer, so that the temperatures of the reagents within the test or storage chambers can be controlled automatically. If necessary, a temperature monitoring device such as a thermocouple may also be included and the results may be fed back to the control means so as to ensure that the desired temperatures are accurately achieved and/or maintained.
The unit may conveniently be provided with the one or more storage chambers prefilled with selected reagents in predetermined amounts and the mouths of the chamber(s) suitably sealed with puncturable sealing means, such as conventional foil seals. The reaction or test chamber of the unit may be provided empty or may contain a predispensed amount of a solid (eg.
freeze-dried) or liquid reagent with the chamber being likewise sealed with its own corresponding protective seal.
Furthermore, there may if desired be provided below the reaction or test chamber an auxiliary reagent chamber whose mouth is itself sealed with a corresponding protective seal which defines the bottom of the reaction or test chamber, which auxiliary chamber contains a predispensed amount of an auxiliary liquid or solid reagent into which the contents of the reaction or test chamber may be delivered at a desired stage in the overall procedure. In some cases, the auxiliary reagent chamber may be suspended above the bottom of the reaction or test chamber.
This allows yet further reagents to be contained at the bottom of the test chamber, which will be included in the reaction only when both the upper and lower surfaces of the reagent chamber are perforated.
Preferably the sealing means closing each of the aforementioned chambers of the unit will be readily breakable or perforatable by the tip of the plunger element as it moves into a respective chamber's mouth. Preferably, therefore, the tip of the plunger element is appropriately shaped for this purpose. It may for example be conical, with a sharp tip and/or it could for instance be formed with buttresses or ribs on its outer surface.
In certain embodiments the tip portion of the plunger may even have one or more channel formations formed in its outer surface =
In particular, the heating means comprises an electrically conducting polymer, for example as described in WO 98/24548.
The polymer heats when an electric current is passed through it.
However, the low thermal mass of the polymer means that rapid cooling can also be assured when the current is off.
These polymers are flexible and convenient, as they may be folded or shaped to make intimate contact with any reaction vessel including test and/or storage chambers of the present invention. Thus, the polymer may form for example a sheath around the test and/or storage chambers, or it may be integral with it.
Where the test chamber and/or the storage chambers include electrically conducting polymers as an integral part thereof, they may be made from the polymer by extrusion, injection moulding or similar techniques. Alternatively, the test chamber or storage chamber may be manufactured using a composite construction in which a layer of the conducting polymer is interposed between layers of the material from which the vessel is made or in which the internal or external surfaces of the reaction vessel is coated with the polymer, or again in which the vessel is basically made of the polymer coated with a thin laminate of a PCR compatible material. Such vessels may be produced using lamination and/or deposition such as chemical or = 29991-52 electrochemical deposition techniques as is conventional in the art.
In a particular embodiment however, the test and/or storge chambers have electrically conducting polymer integral only with 5 a particular region of the test or storage chambers, and in particular a lower region where reagents are contained or stored. This provides for efficient heating just of the reagents and not of other regions of the chambers. Such chambers may be produced using conventional "overmoulding"
techniques.
Test or storage chambers which comprise the polymer as an integral part may provide particularly compact structures.
In preferred practical embodiments of this second aspect of the invention the reaction or test chamber and the one or more storage chambers are formed of, and preferably contained within an integral housing of, a suitable moulded plastics material, e.g. polypropylene. The housing may preferably include an upper peripheral wall which collectively surrounds and extends upwardly past the mouths of the storage chambers in order to act as a baffle to direct liquid reagents overflowing from the chambers into the reaction or test chamber therebelow.
Where the test or storage chambers include electrically conducting polymers, the housing may be provided with electrical contacts, arranged to contact the electrically conducting polymer heating means when the test or storage chambers are in position in the housing. These contacts are suitably connected to an electrical supply, preferably by way of an automatic controller such as a computer, so that the temperatures of the reagents within the test or storage chambers can be controlled automatically. If necessary, a temperature monitoring device such as a thermocouple may also be included and the results may be fed back to the control means so as to ensure that the desired temperatures are accurately achieved and/or maintained.
The unit may conveniently be provided with the one or more storage chambers prefilled with selected reagents in predetermined amounts and the mouths of the chamber(s) suitably sealed with puncturable sealing means, such as conventional foil seals. The reaction or test chamber of the unit may be provided empty or may contain a predispensed amount of a solid (eg.
freeze-dried) or liquid reagent with the chamber being likewise sealed with its own corresponding protective seal.
Furthermore, there may if desired be provided below the reaction or test chamber an auxiliary reagent chamber whose mouth is itself sealed with a corresponding protective seal which defines the bottom of the reaction or test chamber, which auxiliary chamber contains a predispensed amount of an auxiliary liquid or solid reagent into which the contents of the reaction or test chamber may be delivered at a desired stage in the overall procedure. In some cases, the auxiliary reagent chamber may be suspended above the bottom of the reaction or test chamber.
This allows yet further reagents to be contained at the bottom of the test chamber, which will be included in the reaction only when both the upper and lower surfaces of the reagent chamber are perforated.
Preferably the sealing means closing each of the aforementioned chambers of the unit will be readily breakable or perforatable by the tip of the plunger element as it moves into a respective chamber's mouth. Preferably, therefore, the tip of the plunger element is appropriately shaped for this purpose. It may for example be conical, with a sharp tip and/or it could for instance be formed with buttresses or ribs on its outer surface.
In certain embodiments the tip portion of the plunger may even have one or more channel formations formed in its outer surface =
as a route for liquid reagent to drain therefrom as the plunger is retracted from any of the chambers.
Any number of reagent storage chambers may be provided in combination with the reaction or test chamber, depending on the number of reagents to be delivered. Typically there will be a plurality, e.g. 2, 3 or 4, but possibly more, of reagents each to be delivered from its own respective storage chamber, which are preferably arranged symmetrically around and generally above the periphery of the reaction or test chamber. The volume of the or each storage chamber may independently be selected according to the volume of reagent which is required to be delivered from it.
The nature of the reagents included will be widely variable depending on the nature of the reaction being conducted. In addition to reactants necessary for carrying out the desired reaction, chambers containing calibration or quenching agents may be included, as these may also then be added at an appropriate point during the reaction.
As used in the context of this invention, the term "generally above" referring to the location of the reagent storage chamber(s) with respect to the reaction or test chamber means that the majority of the volume of the or each storage chambers lies above the level of the mouth of the reaction or test chamber, in other words such that liquid reagent can flow under gravity into the reaction or test chamber from the mouth of a storage chamber as it overflows therefrom when displaced by the plunger inserted therein. Generally it will preferably be the case that the total volume of each storage chamber will be positioned above the level of the mouth of the reaction or test chamber.
In order to achieve accurate dosing of reagents using the present invention, the shape and dimensions of the plunger element in combination with the shape and dimensions of the respective storage chambers will normally be predetermined, and the distance of travel of the plunger element into each chamber controlled by the plunger's control means. This will typically take into account typical amounts of residual reagent left in the various chambers or adhering to the outer surfaces of the chambers or the plunger element.
In practical implementations of this invention the plunger element is preferably arranged and controlled for insertion into, and retraction from, each storage chamber containing a reagent to be delivered, in a sequential manner. The plunger element may be in the form of a solid or hollow cylindrical rod or wand and the reagent storage chambers may typically be in the form of cylindrical supported tubes. In general, therefore, the plunger element is movable (a) along an upright (substantially vertical, preferably) axis, for the purpose of displacing liquid reagents from their respective storage chambers, and also for initially puncturing the seals which close them, and preferably also (b) in a perpendicular (substantially horizontal, preferably) plane, to allow it to be moved from one storage chamber to another, and so that it may be used (optionally also with or as an alternative to the aforesaid vertical motion) as a stirring rod for mixing reagents in the reaction or test chamber (or even the auxiliary reagent chamber therebeneath, if present). All these movements of the plunger element will be controllable in a predetermined manner by the aforementioned control means.
In versions of the apparatus in which the plunger is a hollow rod (preferably a hollow cylinder) this can be useful for enabling a retractable magnet to inserted into the plunger for the purpose of collecting sample-laden magnetic beads from an earlier stage of an assay apparatus of which the delivery apparatus of the invention forms a part. This is just one example of a known assay technique with which the invention may be used.
In one possible form of the discrete reaction or test unit according to the second aspect of the invention, the plunger element may itself be provided as a component of the unit, e.g.
as a downwardly extending rod attached to an upper closure lid which seals the entire unit prior to use. In this case the lid part will preferably be provided with means by which it can be physically engaged by the plunger control means once it is disengaged from the unit. Also, for this case to be practically realisable, the distance between the lower tip of the plunger element and the lid part to which it is attached will preferably be greater than the depth of the various reagent storage chambers (and furthermore greater than the combined depths of the reagent storage chambers and the reaction or test chamber itself, in the case where there is an auxiliary reagent chamber therebeneath). In embodiments where the plunger element is carried on a lid as defined above, it may for example be expedient for the plunger to be mounted off-centre and the lid to form a carousel-like component for engagement by the plunger control means, whereby horizontal movement of the plunger between symmetrically arranged reagent chambers can be effected simply by rotation of the lid element.
Also encompassed by the present invention, according to a third aspect thereof, is a method for selectively delivering one or more liquid reagents into a reaction or test chamber in a test or assay apparatus, the method comprising:
providing the one or more liquid reagents in one or more respective storage chambers arranged generally above the reaction or test chamber; and inserting a plunger element into the mouth of a selected storage chamber so as to displace a selected reagent from therewithin into the reaction or test chamber generally therebelow by gravitational liquid overflow from the mouth of the chamber.
The above-defined method may in particular be practised in the use of a delivery apparatus, or a reaction, test or assay 5 apparatus, or a discrete reaction or test unit, according to any embodiments of the first and second aspects of the invention discussed above.
In an embodiment, the invention provides a support unit for use in a reaction, test or assay apparatus in the extraction and 10 purification of DNA, the support unit comprising: (i) one or more reagent chambers containing one or more reagents useful in the extraction and purification of DNA, the one or more reagent chambers being sealed; (ii) a separate magnetic beads chamber containing magnetic beads, the separate magnetic beads chamber being sealed; and (iii) a separate sample receiving chamber.
Preferred embodiments of the present invention in its various aspects will now be described in detail, with reference to the accompanying drawings, in which:
Figure 1 is a schematic perspective view of an exemplary preferred embodiment of the reagent delivery apparatus of the invention;
Figure 2 is a schematic perspective view of the main elements of an exemplary assay apparatus into which the apparatus of Figure 1 is incorporated;
Figures 3(a) and 3(b) are schematic plan views of another embodiment of the apparatus, very similar to that of Figure 1 10a but including four separate reagent storage chambers, showing schematically the unit respectively (a) before and (b) after the step of dispensing a first reagent into the reaction chamber of the apparatus;
Figures 4(a), (b) and (c) are schematic side views of a simplified version of the apparatus of Figure 1 showing only two reagent storage chambers, respectively (a) at the start of the reagent delivery procedure, (b) part way through it with the first of the reagents in the process of being delivered into the reaction chamber, and (c) with the delivery of the first reagent completed and the plunger element ready for moving on to the next reagent chamber;
Any number of reagent storage chambers may be provided in combination with the reaction or test chamber, depending on the number of reagents to be delivered. Typically there will be a plurality, e.g. 2, 3 or 4, but possibly more, of reagents each to be delivered from its own respective storage chamber, which are preferably arranged symmetrically around and generally above the periphery of the reaction or test chamber. The volume of the or each storage chamber may independently be selected according to the volume of reagent which is required to be delivered from it.
The nature of the reagents included will be widely variable depending on the nature of the reaction being conducted. In addition to reactants necessary for carrying out the desired reaction, chambers containing calibration or quenching agents may be included, as these may also then be added at an appropriate point during the reaction.
As used in the context of this invention, the term "generally above" referring to the location of the reagent storage chamber(s) with respect to the reaction or test chamber means that the majority of the volume of the or each storage chambers lies above the level of the mouth of the reaction or test chamber, in other words such that liquid reagent can flow under gravity into the reaction or test chamber from the mouth of a storage chamber as it overflows therefrom when displaced by the plunger inserted therein. Generally it will preferably be the case that the total volume of each storage chamber will be positioned above the level of the mouth of the reaction or test chamber.
In order to achieve accurate dosing of reagents using the present invention, the shape and dimensions of the plunger element in combination with the shape and dimensions of the respective storage chambers will normally be predetermined, and the distance of travel of the plunger element into each chamber controlled by the plunger's control means. This will typically take into account typical amounts of residual reagent left in the various chambers or adhering to the outer surfaces of the chambers or the plunger element.
In practical implementations of this invention the plunger element is preferably arranged and controlled for insertion into, and retraction from, each storage chamber containing a reagent to be delivered, in a sequential manner. The plunger element may be in the form of a solid or hollow cylindrical rod or wand and the reagent storage chambers may typically be in the form of cylindrical supported tubes. In general, therefore, the plunger element is movable (a) along an upright (substantially vertical, preferably) axis, for the purpose of displacing liquid reagents from their respective storage chambers, and also for initially puncturing the seals which close them, and preferably also (b) in a perpendicular (substantially horizontal, preferably) plane, to allow it to be moved from one storage chamber to another, and so that it may be used (optionally also with or as an alternative to the aforesaid vertical motion) as a stirring rod for mixing reagents in the reaction or test chamber (or even the auxiliary reagent chamber therebeneath, if present). All these movements of the plunger element will be controllable in a predetermined manner by the aforementioned control means.
In versions of the apparatus in which the plunger is a hollow rod (preferably a hollow cylinder) this can be useful for enabling a retractable magnet to inserted into the plunger for the purpose of collecting sample-laden magnetic beads from an earlier stage of an assay apparatus of which the delivery apparatus of the invention forms a part. This is just one example of a known assay technique with which the invention may be used.
In one possible form of the discrete reaction or test unit according to the second aspect of the invention, the plunger element may itself be provided as a component of the unit, e.g.
as a downwardly extending rod attached to an upper closure lid which seals the entire unit prior to use. In this case the lid part will preferably be provided with means by which it can be physically engaged by the plunger control means once it is disengaged from the unit. Also, for this case to be practically realisable, the distance between the lower tip of the plunger element and the lid part to which it is attached will preferably be greater than the depth of the various reagent storage chambers (and furthermore greater than the combined depths of the reagent storage chambers and the reaction or test chamber itself, in the case where there is an auxiliary reagent chamber therebeneath). In embodiments where the plunger element is carried on a lid as defined above, it may for example be expedient for the plunger to be mounted off-centre and the lid to form a carousel-like component for engagement by the plunger control means, whereby horizontal movement of the plunger between symmetrically arranged reagent chambers can be effected simply by rotation of the lid element.
Also encompassed by the present invention, according to a third aspect thereof, is a method for selectively delivering one or more liquid reagents into a reaction or test chamber in a test or assay apparatus, the method comprising:
providing the one or more liquid reagents in one or more respective storage chambers arranged generally above the reaction or test chamber; and inserting a plunger element into the mouth of a selected storage chamber so as to displace a selected reagent from therewithin into the reaction or test chamber generally therebelow by gravitational liquid overflow from the mouth of the chamber.
The above-defined method may in particular be practised in the use of a delivery apparatus, or a reaction, test or assay 5 apparatus, or a discrete reaction or test unit, according to any embodiments of the first and second aspects of the invention discussed above.
In an embodiment, the invention provides a support unit for use in a reaction, test or assay apparatus in the extraction and 10 purification of DNA, the support unit comprising: (i) one or more reagent chambers containing one or more reagents useful in the extraction and purification of DNA, the one or more reagent chambers being sealed; (ii) a separate magnetic beads chamber containing magnetic beads, the separate magnetic beads chamber being sealed; and (iii) a separate sample receiving chamber.
Preferred embodiments of the present invention in its various aspects will now be described in detail, with reference to the accompanying drawings, in which:
Figure 1 is a schematic perspective view of an exemplary preferred embodiment of the reagent delivery apparatus of the invention;
Figure 2 is a schematic perspective view of the main elements of an exemplary assay apparatus into which the apparatus of Figure 1 is incorporated;
Figures 3(a) and 3(b) are schematic plan views of another embodiment of the apparatus, very similar to that of Figure 1 10a but including four separate reagent storage chambers, showing schematically the unit respectively (a) before and (b) after the step of dispensing a first reagent into the reaction chamber of the apparatus;
Figures 4(a), (b) and (c) are schematic side views of a simplified version of the apparatus of Figure 1 showing only two reagent storage chambers, respectively (a) at the start of the reagent delivery procedure, (b) part way through it with the first of the reagents in the process of being delivered into the reaction chamber, and (c) with the delivery of the first reagent completed and the plunger element ready for moving on to the next reagent chamber;
Figure 5 illustrates a plunger element assembly which may be used in the apparatus of the invention, in which (a) is a perspective view showing a plunger with a magnet installed, (b) is a side view of the magnet, (C) and (d) are end and side views respectively of the plunger, and (e) is a top view of the assembly; and Figure 6 is a diagrammatic view of an apparatus for conducting adenylate kinase assays incorporating the delivery apparatus of the invention.
Referring firstly to Figure 1, housing 1 is formed from injection moulded polypropylene (which is a preferred material because it is readily autoclavable and because aqueous liquids do not so readily adhere to it, compared with nylon or polyethylene for example). The housing 1 contains a lower, central well or reaction chamber 2, which may be provided empty or may contain a pre-dispensed solid or liquid reagent 3 prior to use. A sample for reaction or analysis may be added to this chamber 2. A plunger 4 in the form of a solid rod or hollow wand with a sharp conical tip 4a is movable horizontally and vertically under the control of control hardware and software (not shown).
In this illustrated embodiment the top of the plunger 4 is formed as a lid 9 which may be used to seal the unit prior to use and/or for storage (as generally discussed earlier in this specification) and also for engagement (e.g. by means of slots (not shown) or any other suitable known attachment means in this type of hardware) by the mechanism which controls the movement of the plunger. Also in this embodiment the plunger 4 is shown as a hollow cylindrical rod having an open mouth 9a at the top for receiving a cylindrical magnet (30)(also under the overall control of the apparatus' control means).
Referring firstly to Figure 1, housing 1 is formed from injection moulded polypropylene (which is a preferred material because it is readily autoclavable and because aqueous liquids do not so readily adhere to it, compared with nylon or polyethylene for example). The housing 1 contains a lower, central well or reaction chamber 2, which may be provided empty or may contain a pre-dispensed solid or liquid reagent 3 prior to use. A sample for reaction or analysis may be added to this chamber 2. A plunger 4 in the form of a solid rod or hollow wand with a sharp conical tip 4a is movable horizontally and vertically under the control of control hardware and software (not shown).
In this illustrated embodiment the top of the plunger 4 is formed as a lid 9 which may be used to seal the unit prior to use and/or for storage (as generally discussed earlier in this specification) and also for engagement (e.g. by means of slots (not shown) or any other suitable known attachment means in this type of hardware) by the mechanism which controls the movement of the plunger. Also in this embodiment the plunger 4 is shown as a hollow cylindrical rod having an open mouth 9a at the top for receiving a cylindrical magnet (30)(also under the overall control of the apparatus' control means).
Located above the reaction well 2 in a symmetrical fashion are two storage chambers 5,6 each containing a respective liquid reagent for delivery into the reaction well 2 at a predetermined point in the procedure and each sealed with a conventional foil seal 18. In the case of each reagent, when delivery is required, the plunger 4 is brought into register with the respective chamber 5 or 6, then lowered so as to puncture the respective seal 18 and then further inserted into the chamber so as to displace liquid reagent from therewithin, which simply overflows from the chamber and falls under gravity into the reaction well 2 therebelow.
Additional vertical, and/or possibly horizontal movements of the plunger or wand 4 in the reaction well 2 can be used to effect mixing of dispensed reagents with sample.
A separate, foil-sealed auxiliary chamber 7 is provided below the reaction chamber 2 to provide a means of storing one or more dried auxiliary reagents 8, which can be mixed with reagents in the reaction well by using the wand 4 to punch through its own respective protective seal 18.
In practice flow of reagents out of the various storage chambers down into the reaction well may be assisted by arranging for the surface tension of the various liquids to be lowered. This is a known technique in certain known analytical procedures and can be achieved for example by including either in the liquid reagents or possibly directly in the appropriate chambers of the apparatus a suitable amount of a surfactant such as Triton X-100 (trade mark).
Figure 2 illustrates an example of an assay apparatus into which the delivery device of Figure 1 is incorporated. By way of example, the unit of Figure 1 is shown here as the final chamber in a series of three forming a disposable unit for carrying out AK-phage assays for detecting bacterial contamination of food.
Additional vertical, and/or possibly horizontal movements of the plunger or wand 4 in the reaction well 2 can be used to effect mixing of dispensed reagents with sample.
A separate, foil-sealed auxiliary chamber 7 is provided below the reaction chamber 2 to provide a means of storing one or more dried auxiliary reagents 8, which can be mixed with reagents in the reaction well by using the wand 4 to punch through its own respective protective seal 18.
In practice flow of reagents out of the various storage chambers down into the reaction well may be assisted by arranging for the surface tension of the various liquids to be lowered. This is a known technique in certain known analytical procedures and can be achieved for example by including either in the liquid reagents or possibly directly in the appropriate chambers of the apparatus a suitable amount of a surfactant such as Triton X-100 (trade mark).
Figure 2 illustrates an example of an assay apparatus into which the delivery device of Figure 1 is incorporated. By way of example, the unit of Figure 1 is shown here as the final chamber in a series of three forming a disposable unit for carrying out AK-phage assays for detecting bacterial contamination of food.
The first stage well 10 will contain pre-dispensed magnetic beads, coated with antibodies, for specific capture of target organisms. Using a hollow plunger that can move from well to well, and that can accept a retractable magnet down its centre, beads plus captured bacterial cells may be transferred to the second stage well 11 containing pre-dispensed wash solution, and thence to the final chamber 12 of the unit of the invention for AK assay. As just one example, this first part of the assay may utilise a commercially available assay system called Kingfisher (trade mark), ex Labsystems. For the AK-phage endpoint detection, the reagent solutions in the final unit of the invention would typically be a nutrient broth 12 in the main reaction well or chamber, phage 13 in one of the storage chambers, ADP 14 in the other of the storage chambers and bioluminescence reagent 15 in the auxiliary chamber beneath the main reaction well.
The apparatus may suitably be calibrated by delivering a known amount of ATP from a storage well, in place of either the phage 13 or the ADP 14.
Additional reagents may be included in additional storage chambers or wells. For instance in the context of the AK-phage assay, it may be. desirable to further include a well containing a quenching reagent, such as a bleach or an ink, which is able to halt the reaction or quench the bioluminesence therefrom.
This is suitably arranged to be delivered at the end of the reaction.
This may be particularly helpful where the apparatus contains more than one test chamber and so can monitor multiple reactions sequentially. Quenching of a light reaction in one chamber will prevent light leakage, to the luminometer reading the signal from the subsequent reaction.
The apparatus may suitably be calibrated by delivering a known amount of ATP from a storage well, in place of either the phage 13 or the ADP 14.
Additional reagents may be included in additional storage chambers or wells. For instance in the context of the AK-phage assay, it may be. desirable to further include a well containing a quenching reagent, such as a bleach or an ink, which is able to halt the reaction or quench the bioluminesence therefrom.
This is suitably arranged to be delivered at the end of the reaction.
This may be particularly helpful where the apparatus contains more than one test chamber and so can monitor multiple reactions sequentially. Quenching of a light reaction in one chamber will prevent light leakage, to the luminometer reading the signal from the subsequent reaction.
Figures 3(a) and 3(b) show another embodiment of the unit of the invention which is almost the same as that of Figure 1 but instead having four reagent storage chambers 25, 26, 27 and 28.
Figure 3(a) illustrates the unit prior to the first reagent in chamber 25 being delivered into the reaction well 2, and Figure 3 (b) shows it afterwards, with the predetermined dose of first reagent 2511 having been delivered into the reaction well 2, and leaving a residual amount 25' thereof behind in the chamber.
Figures 4(a), (b) and (c) further illustrate, in simplified schematic form (but self-explanatorily to the skilled person from the foregoing descriptions and the annotations in the Figure) the operation of the apparatus of Figure 1, with the reference numerals corresponding to the same identifying components and features as already referred to in the earlier Figures and discussed above.
Figure 4(a) shows the apparatus at the start of the reagent delivery procedure. Figure 4(b) shows the situation where the plunger 4 is about to be retracted from the reagent chamber 6 (in which a precalculated residual amount 6' of the reagent is left behind), having delivered a predetermined amount 6'' of the reagent from chamber 6 into the reaction well 2. Figure 4(c) shows the situation, following on from Figure 4(b) where the plunger 4 has been retracted from the storage chamber 6 and replaced in the central reaction well 2 and optionally moved vertically and/or horizontally to effect stirring of the contents of the reaction well 2.
Figure 5 illustrates a particular form of plunger (4). In this embodiment, the lid 9 is rectangular in shape to fit the particular apparatus (see Figure 6) in a sealing relationship in certain configurations as described hereinafter. In this case, it is further provided with additional grab holes (31) to allow the plunger assembly to be moved using a machine, from one chamber to another.
Figure 6 illustrates a discrete apparatus, for conducting an adenylate kinase assay for the detection of bacterial cells. In this case, the delivery apparatus is incorporated into a support unit (32), which is provided with a series of additional wells.
5 A first optional well (33) contains reagent broth (34), which may be required for dilution of viscous samples. It is closed by means of a cap (35). Adjacent this, is a well (36) which provides a store for magnetic beads which may be coated with a collection means such as antibodies for cells or microrganisms, 10 and if required are specific for particular target cells or organisms. A broth wash liquid (37) is provided in a further adjacent well (38).
Reagent delivery apparatus in accordance with the invention, is 15 included within the unit. In this embodiment, it comprises a chamber for holding phage (13) and a chamber for ADP (14).
Nutrient broth (12) is supplied in a main reaction well (39) and freeze dried luciferin/luciferase reagent (40) is stored in a foil sealed auxiliary chamber (7), below the main reaction well (39). This unit is suspended above a well (41) containing buffer (42).
The plunger (4) as illustrated in Figure 5 is accommodated within a further well (43). An additional well (44) is provided intermediate the well (37) and the reaction well (39) and is also able to accommodate the plunger (4), and is arranged so that when the plunger is in position in this well, the extended lid of the plunger (9) covers the reaction well (39).
Wells 36, 38, 39, 43 and 44 are sealed by means of a metal foil laminate sheet (45).
In use, a liquid or liquefied sample is placed in the sample well (33). For instance, samples may be formed by swilling a swab sample in nutrient broth (34) present in the well (33).
Figure 3(a) illustrates the unit prior to the first reagent in chamber 25 being delivered into the reaction well 2, and Figure 3 (b) shows it afterwards, with the predetermined dose of first reagent 2511 having been delivered into the reaction well 2, and leaving a residual amount 25' thereof behind in the chamber.
Figures 4(a), (b) and (c) further illustrate, in simplified schematic form (but self-explanatorily to the skilled person from the foregoing descriptions and the annotations in the Figure) the operation of the apparatus of Figure 1, with the reference numerals corresponding to the same identifying components and features as already referred to in the earlier Figures and discussed above.
Figure 4(a) shows the apparatus at the start of the reagent delivery procedure. Figure 4(b) shows the situation where the plunger 4 is about to be retracted from the reagent chamber 6 (in which a precalculated residual amount 6' of the reagent is left behind), having delivered a predetermined amount 6'' of the reagent from chamber 6 into the reaction well 2. Figure 4(c) shows the situation, following on from Figure 4(b) where the plunger 4 has been retracted from the storage chamber 6 and replaced in the central reaction well 2 and optionally moved vertically and/or horizontally to effect stirring of the contents of the reaction well 2.
Figure 5 illustrates a particular form of plunger (4). In this embodiment, the lid 9 is rectangular in shape to fit the particular apparatus (see Figure 6) in a sealing relationship in certain configurations as described hereinafter. In this case, it is further provided with additional grab holes (31) to allow the plunger assembly to be moved using a machine, from one chamber to another.
Figure 6 illustrates a discrete apparatus, for conducting an adenylate kinase assay for the detection of bacterial cells. In this case, the delivery apparatus is incorporated into a support unit (32), which is provided with a series of additional wells.
5 A first optional well (33) contains reagent broth (34), which may be required for dilution of viscous samples. It is closed by means of a cap (35). Adjacent this, is a well (36) which provides a store for magnetic beads which may be coated with a collection means such as antibodies for cells or microrganisms, 10 and if required are specific for particular target cells or organisms. A broth wash liquid (37) is provided in a further adjacent well (38).
Reagent delivery apparatus in accordance with the invention, is 15 included within the unit. In this embodiment, it comprises a chamber for holding phage (13) and a chamber for ADP (14).
Nutrient broth (12) is supplied in a main reaction well (39) and freeze dried luciferin/luciferase reagent (40) is stored in a foil sealed auxiliary chamber (7), below the main reaction well (39). This unit is suspended above a well (41) containing buffer (42).
The plunger (4) as illustrated in Figure 5 is accommodated within a further well (43). An additional well (44) is provided intermediate the well (37) and the reaction well (39) and is also able to accommodate the plunger (4), and is arranged so that when the plunger is in position in this well, the extended lid of the plunger (9) covers the reaction well (39).
Wells 36, 38, 39, 43 and 44 are sealed by means of a metal foil laminate sheet (45).
In use, a liquid or liquefied sample is placed in the sample well (33). For instance, samples may be formed by swilling a swab sample in nutrient broth (34) present in the well (33).
The foil sheet (45) is then removed and a cylindrical magnet (30) (Figure 5) is placed into the plunger (4), which is then used to collect magnetic beads from the well (36). The plunger (4) with the beads held magnetically on the surface is then immersed into a sample liquid. The magnet is (30) is removed, releasing the beads, which are then allowed to thoroughly mix with the sample, for example using the plunger (4) as a stirrer.
During this time, cells will bind to the beads.
The magnet (30) is then replaced in the plunger (4) and so the beads become reattached to the plunger (4) which is removed from the sample. The beads are then deposited in the broth (12) in the reaction well (39) by placing the plunger (4) in the well, and removing the magnet (30). Phage (13), which is specific for the target cells, is added to the reaction mixture by pushing the plunger (4) into the chamber containing it, piercing the cover and causing the phage (13) to overflow into the main reaction well (39). The plunger (4) is then placed in the well (44) so that the lid (9) acts as a cover for the well (39).
The reaction mixture is then incubated for a sufficient period of time to allow the phage to lyse any target cells. Optionally at this stage, magnetic beads may be removed from the reagent well (39), using the plunger (4) with the magnet (30) inserted into it.
ADP (14) is then added to the reaction well by inserting the plunger (4) into the reaction chamber such that the ADP
overflows into the reaction well (39). Again, the reaction may be allowed to incubate if necessary, with the plunger (4) in position in the well (44) so that the lid (9) closes the well (39), to allow adenylate kinase released to convert the ADP to ATP.
In a final stage ATP in the reaction well (39) is detected, by pushing the plunger (4) through the foil sealed chamber (7), releasing the dried luciferase and luciferin (40) and allowing these and the reaction mixture to flow into the buffer (42).
The reagents will mix together and produce a bioluminescent signal, depending upon the amount of ATP present. This may be detected, for example using a luminometer. Any signal will be indicative that the target cells were present in the sample.
Intermediate each of these steps, the plunger (4) may be washed by immersion in the broth (37) in well (38). Movement of the plunger (4) is suitably effected automatically, for example using a computer controlled unit.
Thus the apparatus of the invention provides a convenient means of conducting complex assays.
During this time, cells will bind to the beads.
The magnet (30) is then replaced in the plunger (4) and so the beads become reattached to the plunger (4) which is removed from the sample. The beads are then deposited in the broth (12) in the reaction well (39) by placing the plunger (4) in the well, and removing the magnet (30). Phage (13), which is specific for the target cells, is added to the reaction mixture by pushing the plunger (4) into the chamber containing it, piercing the cover and causing the phage (13) to overflow into the main reaction well (39). The plunger (4) is then placed in the well (44) so that the lid (9) acts as a cover for the well (39).
The reaction mixture is then incubated for a sufficient period of time to allow the phage to lyse any target cells. Optionally at this stage, magnetic beads may be removed from the reagent well (39), using the plunger (4) with the magnet (30) inserted into it.
ADP (14) is then added to the reaction well by inserting the plunger (4) into the reaction chamber such that the ADP
overflows into the reaction well (39). Again, the reaction may be allowed to incubate if necessary, with the plunger (4) in position in the well (44) so that the lid (9) closes the well (39), to allow adenylate kinase released to convert the ADP to ATP.
In a final stage ATP in the reaction well (39) is detected, by pushing the plunger (4) through the foil sealed chamber (7), releasing the dried luciferase and luciferin (40) and allowing these and the reaction mixture to flow into the buffer (42).
The reagents will mix together and produce a bioluminescent signal, depending upon the amount of ATP present. This may be detected, for example using a luminometer. Any signal will be indicative that the target cells were present in the sample.
Intermediate each of these steps, the plunger (4) may be washed by immersion in the broth (37) in well (38). Movement of the plunger (4) is suitably effected automatically, for example using a computer controlled unit.
Thus the apparatus of the invention provides a convenient means of conducting complex assays.
Claims (42)
1. A support unit for use in a reaction, test or assay apparatus in the extraction and purification of DNA, the support unit comprising:
(i) one or more reagent chambers containing one or more reagents useful in the extraction and purification of DNA, the one or more reagent chambers being sealed;
(ii) a separate magnetic beads chamber containing magnetic beads, the separate magnetic beads chamber being sealed; and (iii) a separate sample receiving chamber.
(i) one or more reagent chambers containing one or more reagents useful in the extraction and purification of DNA, the one or more reagent chambers being sealed;
(ii) a separate magnetic beads chamber containing magnetic beads, the separate magnetic beads chamber being sealed; and (iii) a separate sample receiving chamber.
2. The support unit according to claim 1 wherein one or more reagent chambers are sealed by means of a metal foil laminate sheet.
3. The support unit according to claim 1 or claim 2 wherein one or more reagent chambers are prefilled with selected reagents in pre-determined amounts.
4. The support unit according to any one of claims 1 to 3 wherein one or more reagent chambers is in the form of cylindrical supported tubes.
5. The support unit according to any one of claims 1 to 4, wherein the magnetic beads are coated with a collection means.
6. The support unit according to claim 5 wherein the collection means are specific for particular target cells or organisms.
7. The support unit according to claim 5 or claim 6 wherein the collection means are selected from antibodies for cells and microorganisms.
8. The support unit according to any one of claims 1 to 7 wherein the sample receiving chamber or one or more reagent chambers is supplied with heating and/or cooling means.
9. The support unit according to claim 8 wherein the heating means comprises an electrically conducting polymer which is heated by means of passing a controlled electric current through it.
10. The support unit according to claim 9 wherein the electrically conducting polymer forms a sheath around the sample receiving chamber or one or more reagent chambers.
11. The support unit according to claim 9 wherein the electrically conducting polymer is integral with the sample receiving or reagent chamber.
12. The support unit according to any one of claims 1 to 11 wherein the sample receiving chamber or one or more reagent chambers is manufactured using a composite construction.
13. The support unit according to claim 12 wherein a layer of electrically conducting polymer is interposed between layers of the material from which the vessel is made.
14. The support unit according to claim 10 wherein the internal or external surface of the sample receiving chamber or one or more reagent chambers is coated with the polymer.
15. The support unit according to claim 9 wherein the one or more reagent chambers is made of the electrically conducting polymer coated with a thin laminate of a PCR compatible material.
16. The support unit according to any one of claims 9 to 15 wherein the sample receiving chamber or one or more reagent chambers have electrically conducting polymer integral only with a particular region of the one or more reagent chambers.
17. The support unit according to any one of claims 1 to 16 wherein at least one of the sample receiving chamber or the one or more reagent chambers is provided empty.
18. The support unit according to any one of claims 1 to 17 wherein at least one of the reagents within the one or more reagent chambers is a dried auxiliary reagent.
19. The support unit according to any one of claims 1 to 17 wherein at least one of the reagents within the one or more reagent chambers is a liquid reagent provided with a surfactant.
20. The support unit according to any one of claims 1 to 17 wherein at least one of the reagents within the one or more reagent chambers is a quenching reagent.
21. The support unit according to claim 20, wherein the quenching reagent is bleach.
22. The support unit according to any one of claims 1 to 17 wherein at least one of the reagents within the one or more reagent chambers is a calibration or quenching agent.
23. A reaction, test or assay apparatus comprising a support unit according to any one of claims 1 to 22.
24. The reaction, test or assay apparatus according to claim 23, wherein the sample receiving chamber or one or more reagent chambers of the support unit is supplied with heating means comprising an electrically conducting polymer which is heated by means of passing a controlled electric current through it, and wherein the apparatus is provided with electrical contacts, arranged to contact the electrically conducting polymer heating means when the sample receiving chamber or one or more reagent chambers are in position in the apparatus.
25. The reaction, test or assay apparatus according to claim 24 wherein the contacts are connected to an electrical supply by way of an automatic controller so that the temperatures of the reagents within the sample receiving chamber or one or more reagent chambers can be controlled automatically.
26. The reaction, test or assay apparatus according to claim 24 or claim 25 wherein the apparatus comprises a temperature monitoring device.
27. The reaction, test or assay apparatus according to claim 26 wherein the temperature monitoring device comprises a thermocouple.
28. The reaction, test or assay apparatus according to claim 26 wherein the apparatus comprises control means for the electrically conducting polymer.
29. The reaction, test or assay apparatus according to claim 28 wherein the control means receives feedback from the temperature monitoring device.
30. The reaction, test or assay apparatus according to any one of claims 23 to 29 wherein the apparatus comprises a hollow rod for housing a retractable magnet.
31. The reaction, test or assay apparatus according to claim 30, wherein the support unit comprises a further chamber to accommodate the hollow rod.
32. The reaction, test or assay apparatus according to claim 30 or 31 wherein the hollow rod comprises a hollow cylindrical rod.
33. The reaction, test or assay apparatus according to any one of claims 30 to 32 wherein the hollow rod is movable along an upright axis.
34. The reaction, test or assay apparatus according to any one of claims 30 to 32 wherein the hollow rod is movable along an axis perpendicular to the upright axis.
35. The reaction, test or assay apparatus according to any one of claims 30 to 34 wherein the hollow rod is provided with a tip appropriately shaped to break or perforate sealing means of chambers.
36. The reaction, test or assay apparatus according to any one of claims 30 to 35 wherein the hollow rod further comprises a lid.
37. The reaction, test or assay apparatus according to any one of claims 30 to 36 wherein the apparatus comprises a hollow rod control means.
38. The reaction, test or assay apparatus according to claim 37 wherein the hollow rod is provided with engagement means by which it can be physically engaged by the control means.
39. The reaction, test or assay apparatus according to claim 38 wherein the hollow rod control means enables the hollow rod to be used as a stirring rod.
40. The reaction, test or assay apparatus according to any one of claims 23 to 39 wherein the sample receiving chamber and the one or more reagent chambers are contained within a moulded plastics housing.
41. The reaction, test or assay apparatus according to claim 40 wherein the sample receiving chamber and the one or more reagent chambers are of moulded polypropylene.
42. The reaction, test or assay apparatus according to any one of claims 23 to 41 wherein the apparatus comprises a discrete stage for use in the extraction and purification of DNA.
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PCT/GB2002/001797 WO2002087762A1 (en) | 2001-04-30 | 2002-04-18 | Reagent delivery system |
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CA2445863C true CA2445863C (en) | 2013-02-26 |
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2001
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2002
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- 2002-04-18 AU AU2002249430A patent/AU2002249430B2/en not_active Ceased
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- 2002-04-18 DE DE2002612614 patent/DE60212614T2/en not_active Expired - Lifetime
- 2002-04-18 EP EP20020718360 patent/EP1383602B1/en not_active Expired - Lifetime
- 2002-04-18 US US10/476,278 patent/US7638097B2/en not_active Expired - Fee Related
- 2002-04-18 NZ NZ529188A patent/NZ529188A/en unknown
- 2002-04-18 AT AT02718360T patent/ATE330703T1/en not_active IP Right Cessation
- 2002-04-18 JP JP2002585096A patent/JP4147113B2/en not_active Expired - Fee Related
- 2002-04-18 ES ES02718360T patent/ES2266478T3/en not_active Expired - Lifetime
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2005
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2012
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EP1383602B1 (en) | 2006-06-21 |
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DE60212614D1 (en) | 2006-08-03 |
US9067209B2 (en) | 2015-06-30 |
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CN1535182A (en) | 2004-10-06 |
US8298497B2 (en) | 2012-10-30 |
WO2002087762A1 (en) | 2002-11-07 |
ATE330703T1 (en) | 2006-07-15 |
HK1068568A1 (en) | 2005-04-29 |
CN1289197C (en) | 2006-12-13 |
US20040209266A1 (en) | 2004-10-21 |
US20100120131A1 (en) | 2010-05-13 |
CA2445863A1 (en) | 2002-11-07 |
US20150125939A1 (en) | 2015-05-07 |
US7638097B2 (en) | 2009-12-29 |
NZ529188A (en) | 2005-04-29 |
US8815181B2 (en) | 2014-08-26 |
US20100129898A1 (en) | 2010-05-27 |
AU2002249430B2 (en) | 2005-03-03 |
JP4147113B2 (en) | 2008-09-10 |
WO2002087762A8 (en) | 2003-12-31 |
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