CA2246622A1 - Alkaline cellulase and method of producing same - Google Patents
Alkaline cellulase and method of producing same Download PDFInfo
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- CA2246622A1 CA2246622A1 CA002246622A CA2246622A CA2246622A1 CA 2246622 A1 CA2246622 A1 CA 2246622A1 CA 002246622 A CA002246622 A CA 002246622A CA 2246622 A CA2246622 A CA 2246622A CA 2246622 A1 CA2246622 A1 CA 2246622A1
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- cellulase
- dna
- composition
- amino acid
- acid sequence
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Classifications
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/14—Hydrolases (3)
- C12N9/24—Hydrolases (3) acting on glycosyl compounds (3.2)
- C12N9/2402—Hydrolases (3) acting on glycosyl compounds (3.2) hydrolysing O- and S- glycosyl compounds (3.2.1)
- C12N9/2405—Glucanases
- C12N9/2434—Glucanases acting on beta-1,4-glucosidic bonds
- C12N9/2437—Cellulases (3.2.1.4; 3.2.1.74; 3.2.1.91; 3.2.1.150)
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- C—CHEMISTRY; METALLURGY
- C11—ANIMAL OR VEGETABLE OILS, FATS, FATTY SUBSTANCES OR WAXES; FATTY ACIDS THEREFROM; DETERGENTS; CANDLES
- C11D—DETERGENT COMPOSITIONS; USE OF SINGLE SUBSTANCES AS DETERGENTS; SOAP OR SOAP-MAKING; RESIN SOAPS; RECOVERY OF GLYCEROL
- C11D3/00—Other compounding ingredients of detergent compositions covered in group C11D1/00
- C11D3/16—Organic compounds
- C11D3/38—Products with no well-defined composition, e.g. natural products
- C11D3/386—Preparations containing enzymes, e.g. protease or amylase
- C11D3/38645—Preparations containing enzymes, e.g. protease or amylase containing cellulase
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Y—ENZYMES
- C12Y302/00—Hydrolases acting on glycosyl compounds, i.e. glycosylases (3.2)
- C12Y302/01—Glycosidases, i.e. enzymes hydrolysing O- and S-glycosyl compounds (3.2.1)
- C12Y302/01004—Cellulase (3.2.1.4), i.e. endo-1,4-beta-glucanase
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- D—TEXTILES; PAPER
- D06—TREATMENT OF TEXTILES OR THE LIKE; LAUNDERING; FLEXIBLE MATERIALS NOT OTHERWISE PROVIDED FOR
- D06M—TREATMENT, NOT PROVIDED FOR ELSEWHERE IN CLASS D06, OF FIBRES, THREADS, YARNS, FABRICS, FEATHERS OR FIBROUS GOODS MADE FROM SUCH MATERIALS
- D06M2200/00—Functionality of the treatment composition and/or properties imparted to the textile material
- D06M2200/20—Treatment influencing the crease behaviour, the wrinkle resistance, the crease recovery or the ironing ease
Abstract
The present invention provides a cellulase composition obtainable from Bacillus sp. CBS 669.93. A preferred cellulase has a calculated molecular weight of approximately 63 kD, a calculated isoelectric point of about 5 and a pH optimum on CMC of about 6 at 40 ~C and 60 ~C.
Description
WO 97/3400S PCT/US9'/'~,GSl ALKALINE CELLULA~E AND MEI'HOD OF PRODUCING SAME
BACKGROUND OF THE INVENTION
A. Technical field The present invention relates to novel ,cellulase cGi"posilions. The invention further relates to novel ~e" ~'~s~ CGlllpO .itions pr~er~bly derived from B~cillus sp.
The present invention further relates Ito the use of the novel cellulase in composilions ~ecogni~ed in the art as adva. ~ eously havin~ cell~ ce added thereto including 8s an additive in a det~-~enl cGr"posilion, in the lreaLn,enl of 10 ~e'lu'~se containing fabri~ in the t,eal",enl of pulp and paperand in the l,~al,.,enl of starch for the prodwtion of high fructose com-syrup or ethanol.
r~ State of the Art Cellu! ~ses are enzymes which are ~p~le of the hydrolysis of the ,B-D-15 glucos~ c linkages in cell~'ases. Cetlulolytic enzymes have been l,aJi~ionally divided into three major classes: endc3'~c~nases ~o~luc~nases or cellobiohydrolases and ,~-g'Lcosidases (Knowles J. et al. (1987) TIBTECH 5 25~-261); and are known to be produced by a lar~e number of bacleria, yeasts and fungi.
Primary among the aFplin~ 'icns that have been dcveloped for the use of cellulolytic enzymes are those involvin~ degrading (wood)cel' '~se pulp into su~ars for (bio)ethanol production textile l,~al",enls like 'stone washing' and 'Liape shi.,g' and in detergent cGmpositions. Thus ce"u'-ses are known to be useful in dete,~enl compositions for removing dirt i.e., cleaning. For exa",F'e Great Britain 25 App!.cati~n Nos. 2 075 028 2 095 275 and 2 094 826 illustrate improved cleaning performance when deler~enls inco",orale co" Itase Additionally Great Britain ~ppl;c~tion No. 1,358 599 illustrates the use of c~llulase in del~r5~anls to reduce the harshness of cotton containing fabrics.
Another useful feature of se lu'~ces in the l,t7ab"ent of textil~s is their ability 30 to r~condition used fabrics by making their colors more vibrant. For e,~n ?lerepeated washing of cotton containing fabrics results in a greyish cast to the fabric which is bel ~ved to be due to disnupted and diso.der- d fibrils sGr,~et;."es called "pills" caused by me~l ,an c-' action. This greyish cast is particularly noliceable on colored fabrics. As a conse~uence the ability of cellulase to remove the ~isor~lert:d 3~ top layer of the fiber and thus improve the overall appearance of the fabric has been of value.
WO 97/34005 PCT/U' 3G,'~ ef~l Despite knowledge in the art related to many ce'lu'~se compositions having some or all of the above pi upe, lies, there is a continued need for new cell~ ses having a varying spectrum of chaiacl~:nslics which are useful in, for exd"l~'e, tresting textiles, as a component of cleter~nl cG",posilions, in the treP ,.enl of pulp 5 and paper, and in the conversion of b- .l,&ss. Applican~s have discovered certain cellulases which have such a complement of -ha,~cleri:.lies and which are useful in such known ~ ';ons of cellulase.
SUMMARY OF THE INVENTION
It is an object of the present invention to provide a novel cel'~ se having beneficial properties for use in deteryents, treating textiles and pulp and paper manufactunng.
According to the present invention, a ce'l ~'~se is obtainable from or derived from Bacillus sp. CBS 669.93, or a derivative of said ce'lu!-ce. CBS 669.93 is deposited at the CenltaalL,ureau voor Schimmelcultures (CBS), Baam, Netherlands under accession number CBS 669.93, on Decerl,ber 23, 1993 ("CBS 669.93n~.
Preferably, the novel cellulase comprises an amino acid sequence according to ~i~ures 2A-2C (SEQ ID NO: 1), or a derivative thereof having greater than 58%
sequence identity, preferably at least 80% sequence identity and more preferably at least 90% sequence identity thereto. The present invention is also directed to anovel cellulase comprising an amino acid sequence acc~rding to Figures 2A-2C
(SEQ ID NO:1), or a derivative thereof having greater than 72% sequence similarity, preferably at least 80% sequence si")ila,it~ and most ~ f~.al-ly at least 90%
sequence similarity.
According to another embodiment, a cGi"posilion is provided co".p.isi.lg DNA which encodes an amino acid sequence accordin9 to Figures 2A-2C (SEQ ID
NO: 1), or a derivative thereof havin~ greater than ~8% sequence identity, ,Gr~terdbly 80% sequence identity and more ~ref~rd~ly 90% sequence identity thereto.
Altematively, a cG~I~pGsitic~n is provided ~Gr..prising DNA which encodes an amino 30 acid sequence acconJing to Figures 2A-2C (SEQ ID NO:1), or a derivative thereof having greater than 72% sequence similarity, ,~rt:re- aLly 80% sequence similarity and more t~referdbly 90% sequence similarity thereto.
Accol-li,.g to yet another einbodi..,ent of the invention, a method of transforming a slJit~hle .. :~ooryanism with DNA encoding an amino acid sequence35 according to the invention is provided.
WO 97/34005 PCTlU~ 5Cl In an espe~ lly preferred er"bodi~"ent of the present invention, the _P'lu'~se is a cellul~se derived from PacilJus sp. C~S 669.93 havin~ a calculated ~"oiec~ll r weight of approximately 63 kD. The appro~i,nalely 63 kD cellul~se has a cP'cul~t~d isoelectnc point of about 5 and a pH optimum on CMC of about 6 at 40 ~ C and 5 60 C.
E~RlEf DESC~<lr'1 ION OF THE FIGURES
Figure 1 shows the pH profile activity of an appn~i",alQty 63 kD c~ s~
derived from CBS 66g.93 at 40 ~ C and 60 ~ C.
Figures 2A-2C showthe DNA s~quence (SEQ ID NO:2) and cc.-- ~pon ' .
10 amino acid sequence (SEQ ID NO:1) o~ an a~)pruxi,,,alely 63 kD oe'lu'ase derived from CBS 669.93 with the leader peptide sequence underlined, which upon secretion is cleaved to yield the mature enzyme.
DETAlLED DESCRIPTION O~ THE INVENTION
"Derivative" is intended to ind;~le a protein which is derived from the native 1~ protein by addition of one or more amino acids to either or both the C- and N-terminal end of the native protein, subs~itution of one or more amino acids at one or a number of dirrer~nl sites in the native amino acid sequence, deletion of one or more amino acids at either or both ends of the native protein or at one or more sites in the amino acid sequence, or insertion of one or more amino acids at one or more 20 sites in the native amino acid sequence. The prepa~dlion of an enzyme derivative is preferably achieved by modifying a DNA sequence which encodes for the native protein, transformation of that DNA sequence into a suitahle host, and eA~ression of the modified DNA sequence to fonn the derivative enzyme. The derivative of the invention includes peptides comprising altered amino acid sequences in comparison 2~ with a precursor enzyme amino acid sequence (e.g., a wild type or n;ative state enzyme accG~d;.-g to the p,t sen~ invention) and which pepti~les retain a char~ ,islic enzyme nature of the precursor enzyme but which have altered properties in sorne spec,tic aspect. For n~- " r'e~ an altered cellulase may have an increased pH optimum or increased te"~perdture ~esi~ance but will retain its 30 ch~,dclerislic cellu'clytic activity. Derivatives also include che~ ' ",odlfi-,alions of amino acid residues within the enzyme ,-,ole ~ 'e.
A cellulase is "obtainable fromr R~ IS 668.93 if such ce" ~lase has an amino acid sequence. which co"~sponds to the amino acid sequence of a ce'lu~se which may be obtained from that organis",. Thus ce'!ulqse with an identical amino WO 97/34005 PCT/I 1~, . r~SG51 _ 4 __ acid sequence to the 63 kD c~ 'ese of the invention derived from a di~rerer.
Bacillus would be "obtainable fromU e~8 ~/US 669.93.
"Host cell" means a cell which has the capacity to act as a host and expression vehicle for a ~- CG~ ant DNA vector ac~-.Ji.)g to the present ir.v~nlion.
5 In a pr~fe..~:d e--,bocliment according to the present invention "host cell'' means the cells of R~ .lS.
"~NA construct~ or U~NA vector" means a nu le ~ sequenc,e which co,-,prises one or more DNA rld~ 6nls en~ any of the novel . ~ ses or cellulase derivatives de~cribed above.
In a p,efe,n:d e",bodi.)~ent the ce" ~ e is obtainable from the Centraal Bureau voor Schimmelcultures Baam the Netherlands through microorgan,s-"
deposi~ion number CBS 669.~3 (described in a~FI ~ -tion PCT/EP941~4312) deposited under the Rudarest Convention on Decer"ber 23 1993 As used herein the cleposiled species will be referred to as CBS 669.93. In a more preténed embodiment the cel'Jl~çe of the invention is an appro~i-"ately 63 kD ~elM'~e (f '_ ~lated on the basis of amino acid sequence of the mature protein) derived from CBS 669.93 (refe,.ed to herein as the "63 kD Cellulasen). The ap~ru~ir.,ately 63 kD
cellulase has a calculated pl for the mature protein of about 5 and a ptl optimum on CMC at 40 C and 60 C of about 6.
The gene encoding the amino acid sequence of the app,u~i",ately 63 kD
cellul~se was analyzed by co",parison with the acces~ lt sequence data in various libraries (GenBank Swiss-Prot EMBL and PIR) using the of CAOS/CAMM Center University of Nijmegen Holland. A search of d~t~hases for a co".paiisoll of the cellulase encoded by the DNA sequence of the present invention with cellulases encoded by p~ s'-ed or known cellulase gene sequences rev6-'ed that the greatest amount of amino acid identity was found in the cellulase CelB of r-C,'~/L'S
/autus.
The approx;,--alely 63 kD cel' ~I-Fe was shown to be 58% idenlical in sequence and 72% similar in sequence using the TFastA ~r~ ", as descnLed by rear~on & Lipman Proc. Nat. Acad. Sci. vol. 85 pp. 2444 2448 (1g88). The TFastA Data Searching r~uy,dn, is co"""er~ally available in the Sequence Anaiysis Software rac~age Version 6.0 (Genetic Computer Group Univ. Wisconsin E~iGlechno'c ~ Center M~ son Wisconsin 537Q5). The sequence of Bacillus lautusis ~oundinJorgensenetal. Gene vol.93 pp.55-60~199Q~. Thus the 35 present invention encG"~rasses a cell~ se ~,vhich has an amino acid sequence WO 97/34005 PcT/u"~ f '~5651 according to that in Figures 2A-2C tSEQ ID NO:1) or a derivative thereof having greater than 58% sequence identity, pr~ferd~ly greater than 80% sequence identity and most preferably greater than 90% sequence identity thereto. The ~cresenl invention further enco.np~ss2s a cellulase which has an amino acid sequence 5 having greater than 72% s~quence similarity, preferably graater than 80% sequence simila. il~r and most preferdbly greater than 90% sequence similarity to the amino acid sequence accor~ling to Figures 2A-2C (SEQ ID N0:1).
The pn3_~nl invention also ~ I;5~ IOS~S a process for the produ~ion of the ce"u'~se. In one embodiment, U e c~llulase may be produced by cultivating a 10 suitable or~aan;s.n, e.g., Bacfl/us sp. CBS 669.~3, under couJilions so as to produce the fce'!u'~se. Preferably, such conditions include those generally suggested for the cultivation of BacJI/us to maximize cell~ ~ose production and include the use of a cellu'ose derived substrate as an energy source in combination with necess~ry salts, ions and other well known ingredients. Generally, the medium used to 15 cultivate the cells may be any conventionai medium SUit~hlE~ for growing bacteria.
The cells may be cultivated under aerobic condilions in a nutrient nnedium containing assi",ilatlc carbon and nitroQen together with other essential nutrients.
Suitable carbon sources are carbohydrates such as sucrose, glucose and starch, or carbohydrate containing materials such as cereal grain, malt, rice and sorghum.
20 The carbohydrate concentration incorporated in the medium may vary widely, e.g., up to 25% and down to 1-~%, but usually 8-10% will be su ~ 'le, the percentages being calculated as equivalents of glucose. The nillugen source in the nutrient medium may be of inorganic and/or organic nature. Suitable inorganic nitrogen sources are nitrates and a,))r"onium salts. Among the orsanic nitrogen sources 25 used reguiarly in ferrnentation prvc~sses involving the cultiYation of baclelia are soybean meal, cotton seed meal, peanut meal, casein, com, com st~ep liquor, yeast extract, urea and albumin. In adlJition, the nutrient medium should also contain standard trace suL,slances.
The ce'l l~ase may be recovered from the medium by conv~, ~lional 30 procedures includin~ sep~,dti--g the cells from the medium by centrifugation or tilt~al;on, if necess~y after disnuption of the cells, p~e~;p~ 9 the pn~te;n~ceo~ ~C
co,..ponenls of the supe" ,alanl or filtrate by means of a salt, e.g., ar "noni-~sulfate, followed by pu,iricalion by a variety of chl ,maloy.aphi~ procedures, e.g., ion excha.)ge chromalog~aphy, affinity chrv.~,alog-dph~r or similar art recog..i~ad 35 procedures. For the production of the: " z' ~e cellulase according to the invention, WO 97/34005 PC'r/U' r-~ C~51 it is preferred to cultivate under alkaline conditions using media containing a ~e" ~IOSE based ener3y source.
F',efer~bly, the cellulase accordin~ to the present invention is produced 5 utilizin~ genetic engineerin~ lechl,:~ues by bc~r.sk,,,,,;.,~ a su - le host cell with a gene encoding the c ~ ase and e~rcs~i. .g under cond;lions approp~ial2 for host cell s~rowth and cellulase ex~,ression. As a first step the cl.,u",osG",al ~NA may be obtained from the donor ba..Gr,al strain by the r"eU-od of Saito and Miura (Saito 8 Miura Biochim. Biophys. Acta., vol. 72, pp. 619 (1r~63)) or by a similar m~ od.
10 Resl,iclion enzyme cleavage of the c3,rl,l--osG"-al DNA thus obtained givss DNA
fragments conlainins the r'h. ~e celll ~ce gene. For this purpose, any les~ ion enzyme may be used provided that it does not cleave the region of said gene. In the altemative a resl, i~ ~ion enzyme may be used which cieaves the gene using however a reduced enzyme concentration or incubation time to permit only partial15 di~estion. A prefe"t d real,il~ion endonur e~se is Sau3A. From the resulting c;;geslion mixture suitable fragments (4-10kb) may be isol~'e~ and used to transform a su t~ e host cell with a DNA construct e.s. with a DNA construct including the approxi",ately 9 kb DNA f,ag".en~ encoding the 63 kD ~el ~ se according to the invention in com~.. ,alion with a su! -''e vector sequence.
The 8ene encoding the cellulase of the p,esel-~ invention can be cloned using A-phage (expression) vectors and E. coli host cells. (Altematively PCR cloning using consensus primers designed on conserved domains may be used).
Applican~s have discovered that l,dr,sru""ation of the gene encoding the cell ~ ~se of the present invention and e~ ssion in E. coli results in an active protein. After a first cloning step in E. coll, a cellulase gene according to the ~resenl invention can be l,anare, Itsd to a more prefe"ed industrial e)~l,r~ssion host such as Bacillus or Streptomyces spec;Es a filz."enlous fungus such as As~rgillus or Tncho~""a, or 8 yeast such as Sacct7aromyces. High level e~ ssion and se~lion obtainable in these host o,u~ani;.",s allo~,vs accumulation of the cellulase in the fe""enlation medium from v~ich it can suhsequently be recovered.
F,efe,dbly, the e~,r~:ssion host cell compr,ses a Bacillus sp., more pr~ferably Bacillus lichenifonnis or R-~ 'iUS subtilis. In an esperi~lly prere"tsd r embodiment the transfo""alion host is deleted for protease genes to ensure that the product ~el ll~se is not subject to proleolysis in the fe~",enlalion broth or -WO 97/34005 PCT/U'' 36.~rfSl __ 7 concentrates thereof. A preferred general transro.malion and expression protocolfor protease deleted Bacill~ls strains is provided in Ferrari et al., U.S. Patent No.
5,264,366, inco,~otated herein by reference. Also pr~fer~bly, the fermentation of the l,a~ o""ed Rac~ s host is conducted at a pH of about 6.9. Transru,,,,alion 5 and e~,uression in Aspergf~lus is described in, for e~,.,F'e, Berka et al., U.S. Patent No. 5,364,770, inco,po,dlad herein by ,er~rl:i,ce. A ~,~felled promoterwhen the transro..nalion host cell is Bacillus is the aprE promo~r.
The instant approxi,-,clLely 63 kD cellulase derived from CBS 669.93 has been shown to be useful in buffer systems CG,~"ulisin~ glycine, ~mlllG~ ~rn acetAt~, 10 borax and/or tris. This cellu'~ce has also been found to be activated on CMC by the presence of magnesium and inhibited by the presence of calcium. A prupol lion ofmagnesium to calcium of about 250ppm: 750 ppm has also been found to result in an activity benefit.
According to the present invention, the ce'l~ ~lase composilions described 15 above may be employed in dletergent compositions accordi"g to art-recognized methods of utilizing ce"~ ses in detergents. The excellent activity of the instant cell~ se at alkaline pH should result in the present ~ se being especially useful in high pH deter~el-La.
The invention will be explained in more detail in the f~ w;ng exar"r'es 20 which are provided for illustrative purposes and should not to be construed as limitative of the invention.
Screeni~ And Isotation of Cellulase From Alkaline Soil And Water SamPles Two methods were applied for the i501 ~'ion of cellulase-producing 25 microorganisms from alkaline soil and water sa",~N~s In one method, the soil and water sa",l~les were suspended in 0.85% saline solution and directly used in thecarboxymethyl ~el'u'cse (CMC)-agar diffusion assay for dete~,~io,) of cellulase producing c~l~. ,ies In a second n,elhod, the soil and water sa",ples were enriched for ce'~llase containing strains by inc~h~tion in a col' ~'~se containing liquid minimal 30 medium or GAM-medium for 1 to 3 days at 40~C. Cultures that showed bacterial growth were analyzed for cell~ ce activity using the CMC-agar diffusion assay for detection of cell~ se producing colonies. The CMC-agar diffusion assay and enricl,rl,enl procedure utilized a ",;.,i."al medium prepa,dlion at a pH of about 9.7 comprising 1% KNO3, 0.1% yeast extract (Difco), 0.1% KH2PO~, 0.02%
CA 02246622 l998-08-l8 WO 97/34005 PCT/U.. ~ S~l MgSO~.7H2O 1% Na2CO3 4% NaCI and 0.25% CMC (Sigma C-4888). For solidification 1.5% agar was added.
One of two procedures was used for the CMC-agar diffusion assay depending on whether cc cn:es or liquid f~a~ ons were tested. Fortesting c~ cn es 5 cell suspensions in 0.85% saline solution were plated on CMC-containin~ minimal medium. A~ter inu ~hatiQn for 1 to 3 days at 40~C, the plates were replica plated and the parent plate was floodetd with 0.1% Congo Red for 1~ minutes. The plates were de-: ~ed with 1M NaCI for 30 minutes. The strains that sl,~urad a clearin~ zone around the colony were isol~ as polenlial ce ll-ses producing ".i~uor~a,)i~",s.
10 Liquid fractions were assayed by pipettin~ 40 ~ uotC of enzyme solution or fermentation broth into wells punched out from a layer of 5 mm of "~i";",al medium in a petri dish. After incubation for 16 hours at 40~C ce !u'~se activity was detected by Congo Red / NaCI l~edl",en~. The dic.",eter of the clearing zone is a measure for the CMCase activity.
Strains which showed cleariny zones using either of the two sc,eer,i"g methods were selected for srowing up and i~olation of cell~ se. The ~ n es were fermented in 2~ millilitre GAM-medium in 100 millilitre shake flasks in an Inc~ tor Shaker (New Brunswick S~ 2nlific Edison NJ USA~ at 250 r.p.m. at 40~C for 72 hours. CMCase activity was determined in the culture broth at ptl 9 and 40~C to 20 verify the presence of cellulase in the fermentation broth. The CGII ~!e: medium (GAM) used for enzyme production consisled of Peptone (Difco~ 0.5% Yeast extract (Difco) 0.5% ~;lucose. H20 1%, KH2PO4 0.1%, M9504.7H20 0.02%, Na2C03 1% NaCI 4%. The pH was ~d"~sted to 9.5 with 4M HCI afterwhich 1%
CMC was added.
Utilizing the mell.od described above a ce ~'~se producing ~"i.. f~,Gr~a";sn, was isQl~lFd which was further chsracl2riLed as being a motile lon3 thin rod-shaped bacterium occurrinç~ in long c~ains and giving a thread-like appeardnce or alle" .ali~ely in pairs of cells in a ~v form. Th~ su~terminal spores were ellipsoidal with a clear swelling of the spo,an~ium. C~'or..es on GAM-agar appeared as a 30 cream coiored circular flat smooth and shiny surfaced with a sliyhtly irregular margin. Based on 16S rRNA sequence analysis the n~ ,Gryal-isl.t was classiried as cpe~ ~s of the ~enus ~ s. The ors~dn;~n, is ~t:fell~d to herein as CBS 66g.53and is deposiled in the Centraal 3ureau voor Scl.;."r"elc ultures Baam The Nelherlands under that accession number.
WO 97/34005 PCT/U' ,~ 651 _ 9 ._ lSol~tjon of DNA. T.an f~Oudtio~ and ExPression of C~llul~e The alkaliphilic Bacilli strain CBS 6~i9.93 was chosen as a donor strain for ~x~r~ssion cloning in E. coli. Cl"ornosomal DNA was isol~ed accG.~ to the ,--~U~od cles -.iLod by Saito 8 Miura Biochim. Biophys. Acta, vol. 72 pp. 619-629 (1~63).
The isolate~ cl,ru!~.osol)~al DNA was partially digested by the ~I.iclion enzyme Sau3A using serial diluted enzyme solutions for one hour at 37 ~ C using React Buffers (~;ibco BRL I ife Tecl.n~-lDgies, Gaithersburs Md.~ USA) under condilions teco"""ended by the SUFF Er. The digested DNA was f-a. tior.aled by agarose gel eleclfophor~sis and su;ta~le ~ Lons (4-10 kb) were isolatA~I from the gel using QlAquick Gel Extraction Kit according to the prolucol desc, ibed by the suppli~r(QIAGEN inc. Chatsworth Ca. USA).
The Sau3A r~ay---~ of the chrombsomal DNA were used to construct genomic gene libraries in a BamH1 A;gested CIAP treated ZAP Express vector according to ~he ~rotocol described by the suppl er (Sl,~ldgane Cloning Systems La ~olla Ca USA). pBK-CMV phagmids contain ,9 the cioned DNA inserts were excised from the ZAP ExpressTM vector and llansrGlllled into E. coll strain XLOLR.
Recombinant clones were screened by agar diffusion as desc:nbed by Wood etal. Meth. Enzym. vol. 160 pp. 59-74 (1988). Strains that showed clearing zonesaround the colony were isolated. The C~çace activity of the isol~t~d recG/).b:nanls was determined after fermenlalion for 48 hours in 4~YEP-medium cûnsisling of Yeast Extract (Difco) 4% peptone (Difco) 8% lactose 0.2% ampicillin 100~1g/ml.
The recombinant protein was purified (Example 3) and the N-terminal amino acid sequence was determined to be the r I c~ g;
Asn-Glu-Asp-Val-Lys-Thr-Leu-Asp-lle-Gln (SEQ ID: NO 3).
rlasm ~ DNA of the ce ~ - ~ a producin~ recombinant was isol Ited using a QlAprep rla~m.d Kit accordin~ to the p~tocol des~ib6d by the sl ~F er (QIAGEN
Inc ). The pla m ~ con- .ed an app-uxi,nJtely g kb insert of ~-,oll-osG.,-al DNA.
The nu~leolide s~quence of a rla,~s),enl of 2777 bp was determined using a set of de~enerated oligonuc leotidas derived from the N-terrninal amino acid sequence as a primer to locate the gene on the 9 kb insert. The 2777 bp f,dg",e"l con )ed anopen reading frame of 1746 bp from which a protein of 574 amino acids coùld be deduced. The nucleotide sequence of the gene (SEQ. ID. NO 2) coding for said CA 02246622 l998-08-l8 WO 97/34005 PCTIUS9'~'C SliSl cellul~se and the deduced amino acid sequence ~SFQ ID NO 1) of the isol~ted single cellul~se is shown in Figures 2A-2C.
P~. ific~Uon of C~ e The cellul7se producing clones from Example 2 were grown on a CO~I, 'ex medium (4~YEP) consistin~ of Yeast Extract (Difco) 4%, Peptone (Difco) 8%, lactose 0.2%, 100 ~g/ml ampicillin). The ?~,.llentcltion broth was sepc.lated from the culture liquid by centrifugation (8000 rpm). The ce" ~'~se in the su~,el"~lanl was . ~0 precipitated with ammonium sulphate (65% saturation). The prec;ritate was dissolved in 25 mM phosphate buffer pH 7 + 5 mM EDTA until a conductivity of 7 mS/cm was achieved. This solution was applied to a Q-Sepha,.,se FF ~diameter 5 cm, length 10 cm) Anion Exchange column, after which the column was washed with 25 mM phosphate buffer pH 7 + 5 mM EDTA until an absorbency of 0.2 AU. A
gracJient of 0 to 0.5 M NaCi in 25 mM phosphate pH 7 was applied to the column in 80 minutes followed by a ~ dient from 0.5 to 1 M NaCI in 10 minutes. Elution took place in the first ~radient. Afler elution the column was cleaned (upflow) with 1 M
NaOH and equ.'it~aled again with 25 mM phosphate pH 7 + 5 mM EDTA.
Depending on the elution profile, the obtained cellul~se had a purity of up to about 80%.
rroPe. l;~s of CelJulase Acconlin~ to the l..~l.ti~
To deterrnine the pH/te"lpe~ature profile of the ,.pr~Ail~lately 63 kD
25 ~~ se a~,di-lg to the invention, the activity of ~he cellulase was measured on CMC at various pH and t~rllperal-Jre values. A solution cc,.llpris.ng the approxill,alcly 63 kD cellulase was ~-- b .-ed in a buffer in diluted with 10 mMphosphate buffer (pH 7). (pH was conb~"e d by using buffer cG3l,~,isin~ a mixture of 100 ~1 1 M phosphoric acid, 100 ml citric acid and 600 ml distilled water havin~ the pH adjusted to 4, 5, 6, 7, 8, 9 or 10 using 4 M NaOH, after which the mixture is fill~d to 1 L using distilled water). The enzyme solution was diluted until 0.05 Utml measured at pH 7 and 40~C. Each buffer system was tested to ascei ~in the actualpH after mixing 0.5 ml Buffer, 0.5 ml substrate (1% CMC) and 0.1 ml 10 mM
phosphate buffer. Actual pH for the ptl 4, 5, 6, 7, 8, g and 10 solutions was 4.2, 5.2, 6.2, 7, 8, 8.7 and 9.9, ~especli~ely.
WO 97/34005 PCT/U~_ .S'. ~6~1 The results are illustrated in Fi~ure 1 showing the e ~-e ent alkaline activity of the cellulase. The slope of the calibration curve is dependent on the pH of the enzyme substrate mixture for that reason two Dl~ ~- ose :.ldl Idal ds at each pH are taken (500 mg glucose. H2)1100 ml 10 and 25 Umes dilut~d.
~ 5 Ge"- ~n~e activity may be assayed using a .. od;red PAHBAH ~.~ell.od (Lever M. Anal. ~ che,n. 1972, 47, 273-279 and LeverM. Anal. ~ ~he--l. 1977, 81, 21-27)as follows. The pH/te,),perdlure profil~s may be d~l~".-i..ed usin~ a fixed enzyme concenl,dtion which fits in the linear range of the dose r_~."onse profile measured at pH 7 and 40~C. This enzyme cGncer,l,dtion may be used for the m~as~ rllenl of 10 the activities under all other dete", ined condilions. A test tube is filled with 250 lli 2.5% CMC in 50 mM glycine buffer pH 9 (CMC-low v;.,cosily is purchased from Sigma) and 250 ~,l aliquots of the 63 kD ce" ~l~se diluted in the app,upridle buffer.
The test tube is inc~ at~d for 30 minutes at 40~C in a wal~L,dtl" wl,er~aller 1.5 ml of a daily fresh prepared PAHBAH solution (1% PAHBAH in 100 ml 0.5 M NaOH
with 100 ml bismuth solution (containing 48.5 9 bismuth nitrate 28.2 9 polassiumsodium tartrate and 12.0 9 NaOtl in 100 ml) is added. The mixture is heated at 70~C for 10 minutes, after which it is cooled on ice for 2 minutes. The absorption is measured at 410 nm. To eliminate the background abso,bance of the enzyme samp es a control experiment is eYea~ted as follows: a tube with substrate is 20 inc~ ~b~ted under the same condi~ions as the test tube. After the incub~tiQn 1.5 ml PAHBAH and the enzyme prepa,a~ion is added (in this order). One unit (U) is defined as the amount of enzyme producing 1 ~Lmol of glucose from CMC
equivalent deler" ,i. ,ed as reducing sugars per minute per gram product.
BACKGROUND OF THE INVENTION
A. Technical field The present invention relates to novel ,cellulase cGi"posilions. The invention further relates to novel ~e" ~'~s~ CGlllpO .itions pr~er~bly derived from B~cillus sp.
The present invention further relates Ito the use of the novel cellulase in composilions ~ecogni~ed in the art as adva. ~ eously havin~ cell~ ce added thereto including 8s an additive in a det~-~enl cGr"posilion, in the lreaLn,enl of 10 ~e'lu'~se containing fabri~ in the t,eal",enl of pulp and paperand in the l,~al,.,enl of starch for the prodwtion of high fructose com-syrup or ethanol.
r~ State of the Art Cellu! ~ses are enzymes which are ~p~le of the hydrolysis of the ,B-D-15 glucos~ c linkages in cell~'ases. Cetlulolytic enzymes have been l,aJi~ionally divided into three major classes: endc3'~c~nases ~o~luc~nases or cellobiohydrolases and ,~-g'Lcosidases (Knowles J. et al. (1987) TIBTECH 5 25~-261); and are known to be produced by a lar~e number of bacleria, yeasts and fungi.
Primary among the aFplin~ 'icns that have been dcveloped for the use of cellulolytic enzymes are those involvin~ degrading (wood)cel' '~se pulp into su~ars for (bio)ethanol production textile l,~al",enls like 'stone washing' and 'Liape shi.,g' and in detergent cGmpositions. Thus ce"u'-ses are known to be useful in dete,~enl compositions for removing dirt i.e., cleaning. For exa",F'e Great Britain 25 App!.cati~n Nos. 2 075 028 2 095 275 and 2 094 826 illustrate improved cleaning performance when deler~enls inco",orale co" Itase Additionally Great Britain ~ppl;c~tion No. 1,358 599 illustrates the use of c~llulase in del~r5~anls to reduce the harshness of cotton containing fabrics.
Another useful feature of se lu'~ces in the l,t7ab"ent of textil~s is their ability 30 to r~condition used fabrics by making their colors more vibrant. For e,~n ?lerepeated washing of cotton containing fabrics results in a greyish cast to the fabric which is bel ~ved to be due to disnupted and diso.der- d fibrils sGr,~et;."es called "pills" caused by me~l ,an c-' action. This greyish cast is particularly noliceable on colored fabrics. As a conse~uence the ability of cellulase to remove the ~isor~lert:d 3~ top layer of the fiber and thus improve the overall appearance of the fabric has been of value.
WO 97/34005 PCT/U' 3G,'~ ef~l Despite knowledge in the art related to many ce'lu'~se compositions having some or all of the above pi upe, lies, there is a continued need for new cell~ ses having a varying spectrum of chaiacl~:nslics which are useful in, for exd"l~'e, tresting textiles, as a component of cleter~nl cG",posilions, in the treP ,.enl of pulp 5 and paper, and in the conversion of b- .l,&ss. Applican~s have discovered certain cellulases which have such a complement of -ha,~cleri:.lies and which are useful in such known ~ ';ons of cellulase.
SUMMARY OF THE INVENTION
It is an object of the present invention to provide a novel cel'~ se having beneficial properties for use in deteryents, treating textiles and pulp and paper manufactunng.
According to the present invention, a ce'l ~'~se is obtainable from or derived from Bacillus sp. CBS 669.93, or a derivative of said ce'lu!-ce. CBS 669.93 is deposited at the CenltaalL,ureau voor Schimmelcultures (CBS), Baam, Netherlands under accession number CBS 669.93, on Decerl,ber 23, 1993 ("CBS 669.93n~.
Preferably, the novel cellulase comprises an amino acid sequence according to ~i~ures 2A-2C (SEQ ID NO: 1), or a derivative thereof having greater than 58%
sequence identity, preferably at least 80% sequence identity and more preferably at least 90% sequence identity thereto. The present invention is also directed to anovel cellulase comprising an amino acid sequence acc~rding to Figures 2A-2C
(SEQ ID NO:1), or a derivative thereof having greater than 72% sequence similarity, preferably at least 80% sequence si")ila,it~ and most ~ f~.al-ly at least 90%
sequence similarity.
According to another embodiment, a cGi"posilion is provided co".p.isi.lg DNA which encodes an amino acid sequence accordin9 to Figures 2A-2C (SEQ ID
NO: 1), or a derivative thereof havin~ greater than ~8% sequence identity, ,Gr~terdbly 80% sequence identity and more ~ref~rd~ly 90% sequence identity thereto.
Altematively, a cG~I~pGsitic~n is provided ~Gr..prising DNA which encodes an amino 30 acid sequence acconJing to Figures 2A-2C (SEQ ID NO:1), or a derivative thereof having greater than 72% sequence similarity, ,~rt:re- aLly 80% sequence similarity and more t~referdbly 90% sequence similarity thereto.
Accol-li,.g to yet another einbodi..,ent of the invention, a method of transforming a slJit~hle .. :~ooryanism with DNA encoding an amino acid sequence35 according to the invention is provided.
WO 97/34005 PCTlU~ 5Cl In an espe~ lly preferred er"bodi~"ent of the present invention, the _P'lu'~se is a cellul~se derived from PacilJus sp. C~S 669.93 havin~ a calculated ~"oiec~ll r weight of approximately 63 kD. The appro~i,nalely 63 kD cellul~se has a cP'cul~t~d isoelectnc point of about 5 and a pH optimum on CMC of about 6 at 40 ~ C and 5 60 C.
E~RlEf DESC~<lr'1 ION OF THE FIGURES
Figure 1 shows the pH profile activity of an appn~i",alQty 63 kD c~ s~
derived from CBS 66g.93 at 40 ~ C and 60 ~ C.
Figures 2A-2C showthe DNA s~quence (SEQ ID NO:2) and cc.-- ~pon ' .
10 amino acid sequence (SEQ ID NO:1) o~ an a~)pruxi,,,alely 63 kD oe'lu'ase derived from CBS 669.93 with the leader peptide sequence underlined, which upon secretion is cleaved to yield the mature enzyme.
DETAlLED DESCRIPTION O~ THE INVENTION
"Derivative" is intended to ind;~le a protein which is derived from the native 1~ protein by addition of one or more amino acids to either or both the C- and N-terminal end of the native protein, subs~itution of one or more amino acids at one or a number of dirrer~nl sites in the native amino acid sequence, deletion of one or more amino acids at either or both ends of the native protein or at one or more sites in the amino acid sequence, or insertion of one or more amino acids at one or more 20 sites in the native amino acid sequence. The prepa~dlion of an enzyme derivative is preferably achieved by modifying a DNA sequence which encodes for the native protein, transformation of that DNA sequence into a suitahle host, and eA~ression of the modified DNA sequence to fonn the derivative enzyme. The derivative of the invention includes peptides comprising altered amino acid sequences in comparison 2~ with a precursor enzyme amino acid sequence (e.g., a wild type or n;ative state enzyme accG~d;.-g to the p,t sen~ invention) and which pepti~les retain a char~ ,islic enzyme nature of the precursor enzyme but which have altered properties in sorne spec,tic aspect. For n~- " r'e~ an altered cellulase may have an increased pH optimum or increased te"~perdture ~esi~ance but will retain its 30 ch~,dclerislic cellu'clytic activity. Derivatives also include che~ ' ",odlfi-,alions of amino acid residues within the enzyme ,-,ole ~ 'e.
A cellulase is "obtainable fromr R~ IS 668.93 if such ce" ~lase has an amino acid sequence. which co"~sponds to the amino acid sequence of a ce'lu~se which may be obtained from that organis",. Thus ce'!ulqse with an identical amino WO 97/34005 PCT/I 1~, . r~SG51 _ 4 __ acid sequence to the 63 kD c~ 'ese of the invention derived from a di~rerer.
Bacillus would be "obtainable fromU e~8 ~/US 669.93.
"Host cell" means a cell which has the capacity to act as a host and expression vehicle for a ~- CG~ ant DNA vector ac~-.Ji.)g to the present ir.v~nlion.
5 In a pr~fe..~:d e--,bocliment according to the present invention "host cell'' means the cells of R~ .lS.
"~NA construct~ or U~NA vector" means a nu le ~ sequenc,e which co,-,prises one or more DNA rld~ 6nls en~ any of the novel . ~ ses or cellulase derivatives de~cribed above.
In a p,efe,n:d e",bodi.)~ent the ce" ~ e is obtainable from the Centraal Bureau voor Schimmelcultures Baam the Netherlands through microorgan,s-"
deposi~ion number CBS 669.~3 (described in a~FI ~ -tion PCT/EP941~4312) deposited under the Rudarest Convention on Decer"ber 23 1993 As used herein the cleposiled species will be referred to as CBS 669.93. In a more preténed embodiment the cel'Jl~çe of the invention is an appro~i-"ately 63 kD ~elM'~e (f '_ ~lated on the basis of amino acid sequence of the mature protein) derived from CBS 669.93 (refe,.ed to herein as the "63 kD Cellulasen). The ap~ru~ir.,ately 63 kD
cellulase has a calculated pl for the mature protein of about 5 and a ptl optimum on CMC at 40 C and 60 C of about 6.
The gene encoding the amino acid sequence of the app,u~i",ately 63 kD
cellul~se was analyzed by co",parison with the acces~ lt sequence data in various libraries (GenBank Swiss-Prot EMBL and PIR) using the of CAOS/CAMM Center University of Nijmegen Holland. A search of d~t~hases for a co".paiisoll of the cellulase encoded by the DNA sequence of the present invention with cellulases encoded by p~ s'-ed or known cellulase gene sequences rev6-'ed that the greatest amount of amino acid identity was found in the cellulase CelB of r-C,'~/L'S
/autus.
The approx;,--alely 63 kD cel' ~I-Fe was shown to be 58% idenlical in sequence and 72% similar in sequence using the TFastA ~r~ ", as descnLed by rear~on & Lipman Proc. Nat. Acad. Sci. vol. 85 pp. 2444 2448 (1g88). The TFastA Data Searching r~uy,dn, is co"""er~ally available in the Sequence Anaiysis Software rac~age Version 6.0 (Genetic Computer Group Univ. Wisconsin E~iGlechno'c ~ Center M~ son Wisconsin 537Q5). The sequence of Bacillus lautusis ~oundinJorgensenetal. Gene vol.93 pp.55-60~199Q~. Thus the 35 present invention encG"~rasses a cell~ se ~,vhich has an amino acid sequence WO 97/34005 PcT/u"~ f '~5651 according to that in Figures 2A-2C tSEQ ID NO:1) or a derivative thereof having greater than 58% sequence identity, pr~ferd~ly greater than 80% sequence identity and most preferably greater than 90% sequence identity thereto. The ~cresenl invention further enco.np~ss2s a cellulase which has an amino acid sequence 5 having greater than 72% s~quence similarity, preferably graater than 80% sequence simila. il~r and most preferdbly greater than 90% sequence similarity to the amino acid sequence accor~ling to Figures 2A-2C (SEQ ID N0:1).
The pn3_~nl invention also ~ I;5~ IOS~S a process for the produ~ion of the ce"u'~se. In one embodiment, U e c~llulase may be produced by cultivating a 10 suitable or~aan;s.n, e.g., Bacfl/us sp. CBS 669.~3, under couJilions so as to produce the fce'!u'~se. Preferably, such conditions include those generally suggested for the cultivation of BacJI/us to maximize cell~ ~ose production and include the use of a cellu'ose derived substrate as an energy source in combination with necess~ry salts, ions and other well known ingredients. Generally, the medium used to 15 cultivate the cells may be any conventionai medium SUit~hlE~ for growing bacteria.
The cells may be cultivated under aerobic condilions in a nutrient nnedium containing assi",ilatlc carbon and nitroQen together with other essential nutrients.
Suitable carbon sources are carbohydrates such as sucrose, glucose and starch, or carbohydrate containing materials such as cereal grain, malt, rice and sorghum.
20 The carbohydrate concentration incorporated in the medium may vary widely, e.g., up to 25% and down to 1-~%, but usually 8-10% will be su ~ 'le, the percentages being calculated as equivalents of glucose. The nillugen source in the nutrient medium may be of inorganic and/or organic nature. Suitable inorganic nitrogen sources are nitrates and a,))r"onium salts. Among the orsanic nitrogen sources 25 used reguiarly in ferrnentation prvc~sses involving the cultiYation of baclelia are soybean meal, cotton seed meal, peanut meal, casein, com, com st~ep liquor, yeast extract, urea and albumin. In adlJition, the nutrient medium should also contain standard trace suL,slances.
The ce'l l~ase may be recovered from the medium by conv~, ~lional 30 procedures includin~ sep~,dti--g the cells from the medium by centrifugation or tilt~al;on, if necess~y after disnuption of the cells, p~e~;p~ 9 the pn~te;n~ceo~ ~C
co,..ponenls of the supe" ,alanl or filtrate by means of a salt, e.g., ar "noni-~sulfate, followed by pu,iricalion by a variety of chl ,maloy.aphi~ procedures, e.g., ion excha.)ge chromalog~aphy, affinity chrv.~,alog-dph~r or similar art recog..i~ad 35 procedures. For the production of the: " z' ~e cellulase according to the invention, WO 97/34005 PC'r/U' r-~ C~51 it is preferred to cultivate under alkaline conditions using media containing a ~e" ~IOSE based ener3y source.
F',efer~bly, the cellulase accordin~ to the present invention is produced 5 utilizin~ genetic engineerin~ lechl,:~ues by bc~r.sk,,,,,;.,~ a su - le host cell with a gene encoding the c ~ ase and e~rcs~i. .g under cond;lions approp~ial2 for host cell s~rowth and cellulase ex~,ression. As a first step the cl.,u",osG",al ~NA may be obtained from the donor ba..Gr,al strain by the r"eU-od of Saito and Miura (Saito 8 Miura Biochim. Biophys. Acta., vol. 72, pp. 619 (1r~63)) or by a similar m~ od.
10 Resl,iclion enzyme cleavage of the c3,rl,l--osG"-al DNA thus obtained givss DNA
fragments conlainins the r'h. ~e celll ~ce gene. For this purpose, any les~ ion enzyme may be used provided that it does not cleave the region of said gene. In the altemative a resl, i~ ~ion enzyme may be used which cieaves the gene using however a reduced enzyme concentration or incubation time to permit only partial15 di~estion. A prefe"t d real,il~ion endonur e~se is Sau3A. From the resulting c;;geslion mixture suitable fragments (4-10kb) may be isol~'e~ and used to transform a su t~ e host cell with a DNA construct e.s. with a DNA construct including the approxi",ately 9 kb DNA f,ag".en~ encoding the 63 kD ~el ~ se according to the invention in com~.. ,alion with a su! -''e vector sequence.
The 8ene encoding the cellulase of the p,esel-~ invention can be cloned using A-phage (expression) vectors and E. coli host cells. (Altematively PCR cloning using consensus primers designed on conserved domains may be used).
Applican~s have discovered that l,dr,sru""ation of the gene encoding the cell ~ ~se of the present invention and e~ ssion in E. coli results in an active protein. After a first cloning step in E. coll, a cellulase gene according to the ~resenl invention can be l,anare, Itsd to a more prefe"ed industrial e)~l,r~ssion host such as Bacillus or Streptomyces spec;Es a filz."enlous fungus such as As~rgillus or Tncho~""a, or 8 yeast such as Sacct7aromyces. High level e~ ssion and se~lion obtainable in these host o,u~ani;.",s allo~,vs accumulation of the cellulase in the fe""enlation medium from v~ich it can suhsequently be recovered.
F,efe,dbly, the e~,r~:ssion host cell compr,ses a Bacillus sp., more pr~ferably Bacillus lichenifonnis or R-~ 'iUS subtilis. In an esperi~lly prere"tsd r embodiment the transfo""alion host is deleted for protease genes to ensure that the product ~el ll~se is not subject to proleolysis in the fe~",enlalion broth or -WO 97/34005 PCT/U'' 36.~rfSl __ 7 concentrates thereof. A preferred general transro.malion and expression protocolfor protease deleted Bacill~ls strains is provided in Ferrari et al., U.S. Patent No.
5,264,366, inco,~otated herein by reference. Also pr~fer~bly, the fermentation of the l,a~ o""ed Rac~ s host is conducted at a pH of about 6.9. Transru,,,,alion 5 and e~,uression in Aspergf~lus is described in, for e~,.,F'e, Berka et al., U.S. Patent No. 5,364,770, inco,po,dlad herein by ,er~rl:i,ce. A ~,~felled promoterwhen the transro..nalion host cell is Bacillus is the aprE promo~r.
The instant approxi,-,clLely 63 kD cellulase derived from CBS 669.93 has been shown to be useful in buffer systems CG,~"ulisin~ glycine, ~mlllG~ ~rn acetAt~, 10 borax and/or tris. This cellu'~ce has also been found to be activated on CMC by the presence of magnesium and inhibited by the presence of calcium. A prupol lion ofmagnesium to calcium of about 250ppm: 750 ppm has also been found to result in an activity benefit.
According to the present invention, the ce'l~ ~lase composilions described 15 above may be employed in dletergent compositions accordi"g to art-recognized methods of utilizing ce"~ ses in detergents. The excellent activity of the instant cell~ se at alkaline pH should result in the present ~ se being especially useful in high pH deter~el-La.
The invention will be explained in more detail in the f~ w;ng exar"r'es 20 which are provided for illustrative purposes and should not to be construed as limitative of the invention.
Screeni~ And Isotation of Cellulase From Alkaline Soil And Water SamPles Two methods were applied for the i501 ~'ion of cellulase-producing 25 microorganisms from alkaline soil and water sa",~N~s In one method, the soil and water sa",l~les were suspended in 0.85% saline solution and directly used in thecarboxymethyl ~el'u'cse (CMC)-agar diffusion assay for dete~,~io,) of cellulase producing c~l~. ,ies In a second n,elhod, the soil and water sa",ples were enriched for ce'~llase containing strains by inc~h~tion in a col' ~'~se containing liquid minimal 30 medium or GAM-medium for 1 to 3 days at 40~C. Cultures that showed bacterial growth were analyzed for cell~ ce activity using the CMC-agar diffusion assay for detection of cell~ se producing colonies. The CMC-agar diffusion assay and enricl,rl,enl procedure utilized a ",;.,i."al medium prepa,dlion at a pH of about 9.7 comprising 1% KNO3, 0.1% yeast extract (Difco), 0.1% KH2PO~, 0.02%
CA 02246622 l998-08-l8 WO 97/34005 PCT/U.. ~ S~l MgSO~.7H2O 1% Na2CO3 4% NaCI and 0.25% CMC (Sigma C-4888). For solidification 1.5% agar was added.
One of two procedures was used for the CMC-agar diffusion assay depending on whether cc cn:es or liquid f~a~ ons were tested. Fortesting c~ cn es 5 cell suspensions in 0.85% saline solution were plated on CMC-containin~ minimal medium. A~ter inu ~hatiQn for 1 to 3 days at 40~C, the plates were replica plated and the parent plate was floodetd with 0.1% Congo Red for 1~ minutes. The plates were de-: ~ed with 1M NaCI for 30 minutes. The strains that sl,~urad a clearin~ zone around the colony were isol~ as polenlial ce ll-ses producing ".i~uor~a,)i~",s.
10 Liquid fractions were assayed by pipettin~ 40 ~ uotC of enzyme solution or fermentation broth into wells punched out from a layer of 5 mm of "~i";",al medium in a petri dish. After incubation for 16 hours at 40~C ce !u'~se activity was detected by Congo Red / NaCI l~edl",en~. The dic.",eter of the clearing zone is a measure for the CMCase activity.
Strains which showed cleariny zones using either of the two sc,eer,i"g methods were selected for srowing up and i~olation of cell~ se. The ~ n es were fermented in 2~ millilitre GAM-medium in 100 millilitre shake flasks in an Inc~ tor Shaker (New Brunswick S~ 2nlific Edison NJ USA~ at 250 r.p.m. at 40~C for 72 hours. CMCase activity was determined in the culture broth at ptl 9 and 40~C to 20 verify the presence of cellulase in the fermentation broth. The CGII ~!e: medium (GAM) used for enzyme production consisled of Peptone (Difco~ 0.5% Yeast extract (Difco) 0.5% ~;lucose. H20 1%, KH2PO4 0.1%, M9504.7H20 0.02%, Na2C03 1% NaCI 4%. The pH was ~d"~sted to 9.5 with 4M HCI afterwhich 1%
CMC was added.
Utilizing the mell.od described above a ce ~'~se producing ~"i.. f~,Gr~a";sn, was isQl~lFd which was further chsracl2riLed as being a motile lon3 thin rod-shaped bacterium occurrinç~ in long c~ains and giving a thread-like appeardnce or alle" .ali~ely in pairs of cells in a ~v form. Th~ su~terminal spores were ellipsoidal with a clear swelling of the spo,an~ium. C~'or..es on GAM-agar appeared as a 30 cream coiored circular flat smooth and shiny surfaced with a sliyhtly irregular margin. Based on 16S rRNA sequence analysis the n~ ,Gryal-isl.t was classiried as cpe~ ~s of the ~enus ~ s. The ors~dn;~n, is ~t:fell~d to herein as CBS 66g.53and is deposiled in the Centraal 3ureau voor Scl.;."r"elc ultures Baam The Nelherlands under that accession number.
WO 97/34005 PCT/U' ,~ 651 _ 9 ._ lSol~tjon of DNA. T.an f~Oudtio~ and ExPression of C~llul~e The alkaliphilic Bacilli strain CBS 6~i9.93 was chosen as a donor strain for ~x~r~ssion cloning in E. coli. Cl"ornosomal DNA was isol~ed accG.~ to the ,--~U~od cles -.iLod by Saito 8 Miura Biochim. Biophys. Acta, vol. 72 pp. 619-629 (1~63).
The isolate~ cl,ru!~.osol)~al DNA was partially digested by the ~I.iclion enzyme Sau3A using serial diluted enzyme solutions for one hour at 37 ~ C using React Buffers (~;ibco BRL I ife Tecl.n~-lDgies, Gaithersburs Md.~ USA) under condilions teco"""ended by the SUFF Er. The digested DNA was f-a. tior.aled by agarose gel eleclfophor~sis and su;ta~le ~ Lons (4-10 kb) were isolatA~I from the gel using QlAquick Gel Extraction Kit according to the prolucol desc, ibed by the suppli~r(QIAGEN inc. Chatsworth Ca. USA).
The Sau3A r~ay---~ of the chrombsomal DNA were used to construct genomic gene libraries in a BamH1 A;gested CIAP treated ZAP Express vector according to ~he ~rotocol described by the suppl er (Sl,~ldgane Cloning Systems La ~olla Ca USA). pBK-CMV phagmids contain ,9 the cioned DNA inserts were excised from the ZAP ExpressTM vector and llansrGlllled into E. coll strain XLOLR.
Recombinant clones were screened by agar diffusion as desc:nbed by Wood etal. Meth. Enzym. vol. 160 pp. 59-74 (1988). Strains that showed clearing zonesaround the colony were isolated. The C~çace activity of the isol~t~d recG/).b:nanls was determined after fermenlalion for 48 hours in 4~YEP-medium cûnsisling of Yeast Extract (Difco) 4% peptone (Difco) 8% lactose 0.2% ampicillin 100~1g/ml.
The recombinant protein was purified (Example 3) and the N-terminal amino acid sequence was determined to be the r I c~ g;
Asn-Glu-Asp-Val-Lys-Thr-Leu-Asp-lle-Gln (SEQ ID: NO 3).
rlasm ~ DNA of the ce ~ - ~ a producin~ recombinant was isol Ited using a QlAprep rla~m.d Kit accordin~ to the p~tocol des~ib6d by the sl ~F er (QIAGEN
Inc ). The pla m ~ con- .ed an app-uxi,nJtely g kb insert of ~-,oll-osG.,-al DNA.
The nu~leolide s~quence of a rla,~s),enl of 2777 bp was determined using a set of de~enerated oligonuc leotidas derived from the N-terrninal amino acid sequence as a primer to locate the gene on the 9 kb insert. The 2777 bp f,dg",e"l con )ed anopen reading frame of 1746 bp from which a protein of 574 amino acids coùld be deduced. The nucleotide sequence of the gene (SEQ. ID. NO 2) coding for said CA 02246622 l998-08-l8 WO 97/34005 PCTIUS9'~'C SliSl cellul~se and the deduced amino acid sequence ~SFQ ID NO 1) of the isol~ted single cellul~se is shown in Figures 2A-2C.
P~. ific~Uon of C~ e The cellul7se producing clones from Example 2 were grown on a CO~I, 'ex medium (4~YEP) consistin~ of Yeast Extract (Difco) 4%, Peptone (Difco) 8%, lactose 0.2%, 100 ~g/ml ampicillin). The ?~,.llentcltion broth was sepc.lated from the culture liquid by centrifugation (8000 rpm). The ce" ~'~se in the su~,el"~lanl was . ~0 precipitated with ammonium sulphate (65% saturation). The prec;ritate was dissolved in 25 mM phosphate buffer pH 7 + 5 mM EDTA until a conductivity of 7 mS/cm was achieved. This solution was applied to a Q-Sepha,.,se FF ~diameter 5 cm, length 10 cm) Anion Exchange column, after which the column was washed with 25 mM phosphate buffer pH 7 + 5 mM EDTA until an absorbency of 0.2 AU. A
gracJient of 0 to 0.5 M NaCi in 25 mM phosphate pH 7 was applied to the column in 80 minutes followed by a ~ dient from 0.5 to 1 M NaCI in 10 minutes. Elution took place in the first ~radient. Afler elution the column was cleaned (upflow) with 1 M
NaOH and equ.'it~aled again with 25 mM phosphate pH 7 + 5 mM EDTA.
Depending on the elution profile, the obtained cellul~se had a purity of up to about 80%.
rroPe. l;~s of CelJulase Acconlin~ to the l..~l.ti~
To deterrnine the pH/te"lpe~ature profile of the ,.pr~Ail~lately 63 kD
25 ~~ se a~,di-lg to the invention, the activity of ~he cellulase was measured on CMC at various pH and t~rllperal-Jre values. A solution cc,.llpris.ng the approxill,alcly 63 kD cellulase was ~-- b .-ed in a buffer in diluted with 10 mMphosphate buffer (pH 7). (pH was conb~"e d by using buffer cG3l,~,isin~ a mixture of 100 ~1 1 M phosphoric acid, 100 ml citric acid and 600 ml distilled water havin~ the pH adjusted to 4, 5, 6, 7, 8, 9 or 10 using 4 M NaOH, after which the mixture is fill~d to 1 L using distilled water). The enzyme solution was diluted until 0.05 Utml measured at pH 7 and 40~C. Each buffer system was tested to ascei ~in the actualpH after mixing 0.5 ml Buffer, 0.5 ml substrate (1% CMC) and 0.1 ml 10 mM
phosphate buffer. Actual pH for the ptl 4, 5, 6, 7, 8, g and 10 solutions was 4.2, 5.2, 6.2, 7, 8, 8.7 and 9.9, ~especli~ely.
WO 97/34005 PCT/U~_ .S'. ~6~1 The results are illustrated in Fi~ure 1 showing the e ~-e ent alkaline activity of the cellulase. The slope of the calibration curve is dependent on the pH of the enzyme substrate mixture for that reason two Dl~ ~- ose :.ldl Idal ds at each pH are taken (500 mg glucose. H2)1100 ml 10 and 25 Umes dilut~d.
~ 5 Ge"- ~n~e activity may be assayed using a .. od;red PAHBAH ~.~ell.od (Lever M. Anal. ~ che,n. 1972, 47, 273-279 and LeverM. Anal. ~ ~he--l. 1977, 81, 21-27)as follows. The pH/te,),perdlure profil~s may be d~l~".-i..ed usin~ a fixed enzyme concenl,dtion which fits in the linear range of the dose r_~."onse profile measured at pH 7 and 40~C. This enzyme cGncer,l,dtion may be used for the m~as~ rllenl of 10 the activities under all other dete", ined condilions. A test tube is filled with 250 lli 2.5% CMC in 50 mM glycine buffer pH 9 (CMC-low v;.,cosily is purchased from Sigma) and 250 ~,l aliquots of the 63 kD ce" ~l~se diluted in the app,upridle buffer.
The test tube is inc~ at~d for 30 minutes at 40~C in a wal~L,dtl" wl,er~aller 1.5 ml of a daily fresh prepared PAHBAH solution (1% PAHBAH in 100 ml 0.5 M NaOH
with 100 ml bismuth solution (containing 48.5 9 bismuth nitrate 28.2 9 polassiumsodium tartrate and 12.0 9 NaOtl in 100 ml) is added. The mixture is heated at 70~C for 10 minutes, after which it is cooled on ice for 2 minutes. The absorption is measured at 410 nm. To eliminate the background abso,bance of the enzyme samp es a control experiment is eYea~ted as follows: a tube with substrate is 20 inc~ ~b~ted under the same condi~ions as the test tube. After the incub~tiQn 1.5 ml PAHBAH and the enzyme prepa,a~ion is added (in this order). One unit (U) is defined as the amount of enzyme producing 1 ~Lmol of glucose from CMC
equivalent deler" ,i. ,ed as reducing sugars per minute per gram product.
Claims (18)
1. A cellulase obtainable from or derived from Bacillus sp. CBS 669.93, or a derivative thereof.
2. A composition comprising a cellulase which comprises an amino acid sequence according to SEQ ID NO:1, or a derivative thereof having a sequence identity of greater than 58%.
3. The composition according to claim 2, wherein said cellulase has a sequence identity of at least 80% to SEQ. ID NO. 1.
4. The composition according to claim 3, wherein said cellulase has a sequence identity of at least 90% to SEQ. ID NO. 1.
5. A composition comprising a cellulase which comprises an amino acid sequence according to SEQ ID NO:1, or a derivative thereof having a sequence similarity of greater than 72%.
6. The composition according to claim 5, wherein said cellulase has a sequence similarity of at least 80%.
7. The composition according to claim 5, wherein said cellulase has a sequence similarity of at least 90%.
8. The composition according to claim 1, wherein said cellulase is obtained from Bacillus sp. CBS 669.93.
9. A composition comprising DNA which encodes an amino acid sequence according to claim 2 or 5.
10. A composition comprising DNA which encodes an amino acid sequence according to claim 3 or 6.
11. A composition comprising DNA which encodes an amino acid sequence according to claim 4 or 7.
12. An expression vector comprising the DNA composition of claim 9.
13. An expression vector comprising the DNA composition of claim 10.
14. An expression vector comprising the DNA composition of claim 11.
15. A method of expressing a cellulase comprising:
(a) transforming a suitable microorganism with DNA encoding an amino acid sequence according to claim 2 or 5;
(b) preparing a fermentation broth containing said suitable microorganism under conditions suitable for expression of said DNA;
(c) maintaining said fermentation broth for a time and under conditions to permit the expression of a desired amount of said cellulase;
and (d) collecting said fermentation broth which contains said cellulase.
(a) transforming a suitable microorganism with DNA encoding an amino acid sequence according to claim 2 or 5;
(b) preparing a fermentation broth containing said suitable microorganism under conditions suitable for expression of said DNA;
(c) maintaining said fermentation broth for a time and under conditions to permit the expression of a desired amount of said cellulase;
and (d) collecting said fermentation broth which contains said cellulase.
16. A detergent composition comprising the cellulase of claims 1,3 or 5.
17. A method of treating textiles comprising contacting said textile with the cellulase of claims 1, 2 or 5.
18. A method of treating cellulose based pulp comprising contacting said cellulose based pulp with the cellulase according to claims 1, 2 or 5.
Applications Claiming Priority (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US61411596A | 1996-03-12 | 1996-03-12 | |
| US614,115 | 1996-03-12 |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| CA2246622A1 true CA2246622A1 (en) | 1997-09-18 |
Family
ID=24459917
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CA002246622A Abandoned CA2246622A1 (en) | 1996-03-12 | 1996-04-26 | Alkaline cellulase and method of producing same |
Country Status (11)
| Country | Link |
|---|---|
| US (1) | US6063611A (en) |
| EP (1) | EP0888455B1 (en) |
| CN (1) | CN1214082A (en) |
| AR (1) | AR001732A1 (en) |
| AT (1) | ATE282703T1 (en) |
| AU (1) | AU5713896A (en) |
| BR (1) | BR9612547A (en) |
| CA (1) | CA2246622A1 (en) |
| DE (1) | DE69633873T2 (en) |
| WO (1) | WO1997034005A1 (en) |
| ZA (1) | ZA963348B (en) |
Families Citing this family (14)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US6313081B1 (en) * | 1995-04-28 | 2001-11-06 | Henkel Kommanditgesellschaft Auf Aktien (Kgaa) | Detergents comprising cellulases |
| US6426189B1 (en) * | 1999-10-01 | 2002-07-30 | Novozymes A/S | Cellulose films for screening |
| WO2001096382A2 (en) | 2000-06-15 | 2001-12-20 | Prokaria Ehf. | Thermostable cellulase |
| WO2002064738A2 (en) * | 2001-02-12 | 2002-08-22 | Genencor International, Inc. | Modified target enzymes having catalytic triads and uses thereof |
| CA2502304C (en) * | 2002-10-08 | 2013-10-01 | Genencor International, Inc. | Phenolic binding peptides |
| ES2375360T3 (en) * | 2003-11-06 | 2012-02-29 | Danisco Us Inc. | SUPPORTED AND JOINT VEGF PEPTIDES TO TREAT SKIN DISEASES. |
| CN101278051B (en) | 2005-05-05 | 2011-10-05 | 金克克国际有限公司 | Personal care compositions and methods for their use |
| US7772181B2 (en) * | 2008-10-15 | 2010-08-10 | Danisco Us Inc. | Personal care compositions comprising modified variant Bowman Birk Protease Inhibitors |
| JP5740308B2 (en) | 2008-10-15 | 2015-06-24 | ダニスコ・ユーエス・インク | Modified mutant Bowman-Brick protease inhibitor |
| US7803902B2 (en) * | 2008-10-15 | 2010-09-28 | Danisco Us Inc. | Modified variant bowman birk protease inhibitors |
| CN102586133B (en) * | 2011-12-22 | 2014-12-10 | 红塔烟草(集团)有限责任公司 | Cellulose-producing strain, cellulose and method for producing and fermenting cellulose |
| CN103074283A (en) * | 2013-01-25 | 2013-05-01 | 中国热带农业科学院农产品加工研究所 | Bacillussp., microbial agent and applications of Bacillussp. and microbial agent |
| WO2015049370A1 (en) | 2013-10-03 | 2015-04-09 | Novozymes A/S | Detergent composition and use of detergent composition |
| CN109750017B (en) * | 2017-11-06 | 2022-11-22 | 广州中国科学院先进技术研究所 | Alkaline cellulase and preparation method and application thereof |
Family Cites Families (2)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| DK16490D0 (en) * | 1990-01-19 | 1990-01-19 | Novo Nordisk As | ENZYME |
| US6140095A (en) * | 1993-12-24 | 2000-10-31 | Dsm N.V. | Alkalitolerant xylanases |
-
1996
- 1996-04-26 US US08/732,433 patent/US6063611A/en not_active Expired - Lifetime
- 1996-04-26 DE DE69633873T patent/DE69633873T2/en not_active Expired - Lifetime
- 1996-04-26 AU AU57138/96A patent/AU5713896A/en not_active Abandoned
- 1996-04-26 CN CN96180208A patent/CN1214082A/en active Pending
- 1996-04-26 WO PCT/US1996/005651 patent/WO1997034005A1/en active IP Right Grant
- 1996-04-26 AR AR33631796A patent/AR001732A1/en unknown
- 1996-04-26 AT AT96915338T patent/ATE282703T1/en not_active IP Right Cessation
- 1996-04-26 BR BR9612547A patent/BR9612547A/en not_active Application Discontinuation
- 1996-04-26 CA CA002246622A patent/CA2246622A1/en not_active Abandoned
- 1996-04-26 ZA ZA963348A patent/ZA963348B/en unknown
- 1996-04-26 EP EP96915338A patent/EP0888455B1/en not_active Expired - Lifetime
Also Published As
| Publication number | Publication date |
|---|---|
| AR001732A1 (en) | 1997-11-26 |
| EP0888455B1 (en) | 2004-11-17 |
| ZA963348B (en) | 1996-11-04 |
| BR9612547A (en) | 1999-07-20 |
| ATE282703T1 (en) | 2004-12-15 |
| US6063611A (en) | 2000-05-16 |
| DE69633873T2 (en) | 2005-10-27 |
| DE69633873D1 (en) | 2004-12-23 |
| CN1214082A (en) | 1999-04-14 |
| EP0888455A1 (en) | 1999-01-07 |
| WO1997034005A1 (en) | 1997-09-18 |
| AU5713896A (en) | 1997-10-01 |
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